RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 SIRPDQ9H106 197 aa13.08□□□□□ -0.32
PCNX1-209ENST00000554879 OSTCQ9NRP0 149 aa13.07□□□□□ -0.32
PCNX1-209ENST00000554879 TRAV41A0A0B4J266 112 aa13.07□□□□□ -0.32
PCNX1-209ENST00000554879 TRAV8-2A0A0B4J237 113 aa13.07□□□□□ -0.32
PCNX1-209ENST00000554879 V9GYV3 84 aa13.07□□□□□ -0.32
PCNX1-209ENST00000554879 TRBV7-9A0A0J9YWB2 115 aa13.06□□□□□ -0.32
PCNX1-209ENST00000554879 NUP35Q8NFH5 326 aa13.06□□□□□ -0.32
PCNX1-209ENST00000554879 JMJD8Q96S16 334 aa13.06□□□□□ -0.32
PCNX1-209ENST00000554879 TRGV9Q99603 122 aa13.06□□□□□ -0.32
PCNX1-209ENST00000554879 METTL26Q96S19 204 aa13.06□□□□□ -0.32
PCNX1-209ENST00000554879 VGLL1Q99990 258 aa13.06□□□□□ -0.32
PCNX1-209ENST00000554879 LRBAP50851 2863 aa13.06□□□□□ -0.32
PCNX1-209ENST00000554879 OR4X2Q8NGF9 303 aa13.06□□□□□ -0.32
PCNX1-209ENST00000554879 C20orf78Q9BR46 151 aa13.05□□□□□ -0.32
PCNX1-209ENST00000554879 TMEM160Q9NX00 188 aa13.05□□□□□ -0.32
PCNX1-209ENST00000554879 COX8AP10176 69 aa13.05□□□□□ -0.32
PCNX1-209ENST00000554879 PRR20EP86478 221 aa13.05□□□□□ -0.32
PCNX1-209ENST00000554879 PRR20CP86479 221 aa13.05□□□□□ -0.32
PCNX1-209ENST00000554879 PRR20DP86480 221 aa13.05□□□□□ -0.32
PCNX1-209ENST00000554879 PRR20BP86481 221 aa13.05□□□□□ -0.32
PCNX1-209ENST00000554879 PRR20AP86496 221 aa13.05□□□□□ -0.32
PCNX1-209ENST00000554879 NDFIP1Q9BT67 221 aa13.05□□□□□ -0.32
PCNX1-209ENST00000554879 IL17RELQ6ZVW7 336 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 SLC25A39Q9BZJ4 359 aaPredicted RBP13.04□□□□□ -0.32
PCNX1-209ENST00000554879 Q9H3A6 140 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 IGHV1-24A0A0C4DH33 117 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 FNDC10F2Z333 226 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 PEX7O00628 323 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 RPL7P18124 248 aaKnown RBP13.04□□□□□ -0.32
PCNX1-209ENST00000554879 CENPVQ7Z7K6 275 aaPredicted RBP13.04□□□□□ -0.32
PCNX1-209ENST00000554879 EXOC3-AS1Q8N2X6 119 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 Q8N976 141 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 YAE1D1Q9NRH1 226 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 HECTD1Q9ULT8 2610 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 NPIPB5A8MRT5 1133 aa13.04□□□□□ -0.32
PCNX1-209ENST00000554879 RELNP78509 3460 aa13.03□□□□□ -0.32
PCNX1-209ENST00000554879 JMJD1CQ15652 2540 aa13.03□□□□□ -0.32
PCNX1-209ENST00000554879 PVRIGQ6DKI7 326 aa13.03□□□□□ -0.32
PCNX1-209ENST00000554879 SPAG8Q99932 426 aaPredicted RBP13.03□□□□□ -0.32
PCNX1-209ENST00000554879 MORN5Q5VZ52 161 aa13.03□□□□□ -0.32
PCNX1-209ENST00000554879 GRAMD2BQ96HH9 432 aa13.03□□□□□ -0.32
PCNX1-209ENST00000554879 BEX4Q9NWD9 120 aaPredicted RBP13.03□□□□□ -0.32
PCNX1-209ENST00000554879 HAX1O00165 279 aa13.02□□□□□ -0.32
PCNX1-209ENST00000554879 TEX22C9J3V5 150 aa13.02□□□□□ -0.33
PCNX1-209ENST00000554879 FSTL3O95633 263 aa13.02□□□□□ -0.33
PCNX1-209ENST00000554879 NDPQ00604 133 aa13.02□□□□□ -0.33
PCNX1-209ENST00000554879 DSCAML1Q8TD84 2053 aa13.02□□□□□ -0.33
PCNX1-209ENST00000554879 TRAV8-1A0A0A6YYK1 113 aa13.02□□□□□ -0.33
PCNX1-209ENST00000554879 PRSS29PA6NIE9 313 aa13.02□□□□□ -0.33
PCNX1-209ENST00000554879 TTC9CQ8N5M4 171 aa13.02□□□□□ -0.33
PCNX1-209ENST00000554879 C11orf44Q8N8P7 122 aa13.02□□□□□ -0.33
PCNX1-209ENST00000554879 CFAP46Q8IYW2 2715 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 IGHV7-81A0A0B4J1V7 117 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 IGFL4Q6B9Z1 124 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 C8orf86Q6ZUL3 223 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 PCP2Q8IVA1 136 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 C1QTNF4Q9BXJ3 329 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 ODF3BA8MYP8 253 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 OVOL3O00110 214 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 GATA3P23771 443 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 ASCL2Q99929 193 aa13.01□□□□□ -0.33
PCNX1-209ENST00000554879 DEFB113Q30KQ7 82 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 Q8N9W7 124 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 PSG8Q9UQ74 426 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 GAGE12JA6NER3 117 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 GAGE7O76087 117 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 GAGE12FP0CL80 117 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 GAGE12GP0CL81 117 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 GAGE12IP0CL82 117 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 ID1P41134 155 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 GAGE4Q13068 117 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 CFHR4Q92496 578 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 C16orf92Q96LL3 132 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 TTTY13Q9BZ97 58 aa13□□□□□ -0.33
PCNX1-209ENST00000554879 MT-ATP8P03928 68 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 KRTAP10-9P60411 292 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 BLCAPP62952 87 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 GTSCR1Q86UQ5 136 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 OR9G4Q8NGQ1 327 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 GLMPQ8WWB7 406 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 FLNBO75369 2602 aaKnown RBP12.99□□□□□ -0.33
PCNX1-209ENST00000554879 LY6LH3BQJ8 138 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 TMEM95Q3KNT9 176 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 IGHV4-59P01825 116 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 RIGQ13278 110 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 DEFB112Q30KQ8 113 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 SCRT2Q9NQ03 307 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 EPDR1Q9UM22 224 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 NPBQ8NG41 125 aa12.99□□□□□ -0.33
PCNX1-209ENST00000554879 TET2Q6N021 2002 aaPredicted RBP12.99□□□□□ -0.33
PCNX1-209ENST00000554879 TMEM189A5PLL7 270 aa12.98□□□□□ -0.33
PCNX1-209ENST00000554879 PRSS46E5RG02 174 aa12.98□□□□□ -0.33
PCNX1-209ENST00000554879 PRELID3AQ96N28 172 aa12.98□□□□□ -0.33
PCNX1-209ENST00000554879 SLC25A2Q9BXI2 301 aa12.98□□□□□ -0.33
PCNX1-209ENST00000554879 C2orf70A6NJV1 201 aa12.98□□□□□ -0.33
PCNX1-209ENST00000554879 LINC01548A6NM66 108 aa12.98□□□□□ -0.33
PCNX1-209ENST00000554879 GGTLC3B5MD39 225 aa12.98□□□□□ -0.33
PCNX1-209ENST00000554879 F8W1H4 67 aa12.98□□□□□ -0.33
PCNX1-209ENST00000554879 M0R3E3 92 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms