RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 Q9H3A6 140 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 TMPRSS5Q9H3S3 457 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 HECTD4Q9Y4D8 3996 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 TRAV12-3A0A0B4J271 114 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 PGPA6NDG6 321 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 SULT1A2P50226 295 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 UBE2G2P60604 165 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 KIR3DS1Q14943 382 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 TMEM88Q6PEY1 159 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 C9orf47Q6ZRZ4 202 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 UBE2DNLQ8IWF7 75 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 CMTM2Q8TAZ6 248 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 RNASE8Q8TDE3 154 aaKnown RBP6.16□□□□□ -1.42
ACTN1-213ENST00000554508 MBD3L1Q8WWY6 194 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 PYGO2Q9BRQ0 406 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 NOP10Q9NPE3 64 aaKnown RBP6.16□□□□□ -1.42
ACTN1-213ENST00000554508 OTORQ9NRC9 128 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 RPH3ALQ9UNE2 315 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
ACTN1-213ENST00000554508 SNURFLB1AK76 121 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 F5H768 121 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 TEX46H3BTG2 121 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 NMBP08949 121 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 LGALS9BQ3B8N2 356 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 TMEM78Q5T7P6 136 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 LINC00336Q6ZUF6 198 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 SUN5Q8TC36 379 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 RXFP4Q8TDU9 374 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 FAM19A4Q96LR4 140 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 AGPAT4-IT1Q9H0P7 198 aa6.15□□□□□ -1.42
ACTN1-213ENST00000554508 IGKV2-40A0A087WW87 121 aaPredicted RBP6.14□□□□□ -1.43
ACTN1-213ENST00000554508 A0A1W2PRE2 83 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 C7orf71A4D174 169 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 KLLNB2CW77 178 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 J3KRW8 73 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 IFNA7P01567 189 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 IGKV2D-40P01614 121 aaPredicted RBP6.14□□□□□ -1.43
ACTN1-213ENST00000554508 GPX1P07203 203 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 CRISP2P16562 243 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 FAM3BP58499 235 aaPredicted RBP6.14□□□□□ -1.43
ACTN1-213ENST00000554508 SUMO1P63165 101 aaKnown RBP6.14□□□□□ -1.43
ACTN1-213ENST00000554508 DAZ2Q13117 558 aaKnown RBP6.14□□□□□ -1.43
ACTN1-213ENST00000554508 ERCC8Q13216 396 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 CST9LP1Q5W188 147 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 LINC00612Q8N6U2 182 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 LINC00467Q9BRT7 94 aa6.14□□□□□ -1.43
ACTN1-213ENST00000554508 MUC4Q99102 2169 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 TRBV7-9A0A0J9YWB2 115 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 RBAKDNA6NC62 111 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 FAM74A7A6NL05 159 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 GGTLC3B5MD39 225 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 DIRC3C9JPN6 131 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 PAGE4O60829 102 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 ZNF324O75467 553 aaPredicted RBP6.13□□□□□ -1.43
ACTN1-213ENST00000554508 RNASE4P34096 147 aaKnown RBP6.13□□□□□ -1.43
ACTN1-213ENST00000554508 PPT1P50897 306 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 RAB14P61106 215 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 GNG5P63218 68 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 BLOC1S1P78537 153 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 ANXA2RQ3ZCQ2 193 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 EIF4E3Q8N5X7 224 aaKnown RBP6.13□□□□□ -1.43
ACTN1-213ENST00000554508 C5orf17Q8NAS9 161 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 ZNF680Q8NEM1 530 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 VGLL1Q99990 258 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 NKX6-2Q9C056 277 aaPredicted RBP6.13□□□□□ -1.43
ACTN1-213ENST00000554508 ZNF492Q9P255 531 aa6.13□□□□□ -1.43
ACTN1-213ENST00000554508 TRAV1-1A0A0B4J248 108 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 K7EQM0 130 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 M0R2N4 97 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 TCRAP04437 139 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 ZNF138P52744 262 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 CCL20P78556 96 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 BTN1A1Q13410 526 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 TEX261Q6UWH6 196 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 GOLT1AQ6ZVE7 132 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 ATG101Q9BSB4 218 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 MANBALQ9NQG1 85 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 GNG13Q9P2W3 67 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 EPDR1Q9UM22 224 aa6.12□□□□□ -1.43
ACTN1-213ENST00000554508 GAGE12BA1L429 117 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 GAGE7O76087 117 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 NUDT3O95989 172 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 IFNA1P01562 189 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 GAGE12FP0CL80 117 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 GAGE12GP0CL81 117 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 GAGE12IP0CL82 117 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 CCL18P55774 89 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 OR5I1Q13606 314 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 Q6ZR54 194 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 ZFAND2AQ8N6M9 145 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 ARL6IP6Q8N6S5 226 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 Q8TAT8 98 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 SGK494Q96LW2 274 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 C18orf15Q96N68 181 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 LENEPQ9Y5L5 61 aa6.11□□□□□ -1.43
ACTN1-213ENST00000554508 IGLV2-18A0A075B6J9 118 aa6.1□□□□□ -1.43
ACTN1-213ENST00000554508 IGHV1OR15-1A0A075B7D0 117 aa6.1□□□□□ -1.43
ACTN1-213ENST00000554508 TRAV8-1A0A0A6YYK1 113 aa6.1□□□□□ -1.43
ACTN1-213ENST00000554508 SERTM2A0A1B0GWG4 89 aa6.1□□□□□ -1.43
ACTN1-213ENST00000554508 F6UZH7 168 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms