RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 STAG3L2P0CL84 134 aa5.29□□□□□ -1.56
LINC00640-201ENST00000554409 STAG3L3P0CL85 134 aa5.29□□□□□ -1.56
LINC00640-201ENST00000554409 CDC34P49427 236 aaPredicted RBP5.29□□□□□ -1.56
LINC00640-201ENST00000554409 FAM74A1Q5RGS3 127 aa5.29□□□□□ -1.56
LINC00640-201ENST00000554409 IBA57Q5T440 356 aaKnown RBP5.29□□□□□ -1.56
LINC00640-201ENST00000554409 PRR9Q5T870 116 aa5.29□□□□□ -1.56
LINC00640-201ENST00000554409 EIF4E3Q8N5X7 224 aaKnown RBP5.29□□□□□ -1.56
LINC00640-201ENST00000554409 HSD17B11Q8NBQ5 300 aa5.29□□□□□ -1.56
LINC00640-201ENST00000554409 C11orf72Q8NBR9 251 aa5.29□□□□□ -1.56
LINC00640-201ENST00000554409 INO80EQ8NBZ0 244 aaPredicted RBP5.29□□□□□ -1.56
LINC00640-201ENST00000554409 OR2T35Q8NGX2 323 aa5.29□□□□□ -1.56
LINC00640-201ENST00000554409 SUN5Q8TC36 379 aa5.29□□□□□ -1.56
LINC00640-201ENST00000554409 C18orf15Q96N68 181 aa5.29□□□□□ -1.56
LINC00640-201ENST00000554409 VPS13DQ5THJ4 4388 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 DNAH6Q9C0G6 4158 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 BORCS7-ASMTA0A0B4J1R7 106 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 PGPA6NDG6 321 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 F5H768 121 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 EIF3GO75821 320 aaKnown RBP eCLIP5.28□□□□□ -1.56
LINC00640-201ENST00000554409 ARL14EPLP0DKL9 152 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 RNASE4P34096 147 aaKnown RBP5.28□□□□□ -1.56
LINC00640-201ENST00000554409 TCL1AP56279 114 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 FAM3BP58499 235 aaPredicted RBP5.28□□□□□ -1.56
LINC00640-201ENST00000554409 Q6AWC8 147 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 Q8TAT8 98 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 RAB24Q969Q5 203 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 GNPNAT1Q96EK6 184 aaPredicted RBP5.28□□□□□ -1.56
LINC00640-201ENST00000554409 NACAE9PAV3 2078 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 KMT2AQ03164 3969 aa5.28□□□□□ -1.56
LINC00640-201ENST00000554409 IGHV1OR15-1A0A075B7D0 117 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 SERTM2A0A1B0GWG4 89 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 GAGE12BA1L429 117 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 H3BNG1 76 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 TAAR5O14804 337 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 GAGE7O76087 117 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 GAGE12FP0CL80 117 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 GAGE12GP0CL81 117 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 GAGE12IP0CL82 117 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 GCHFRP30047 84 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 LGALS9BQ3B8N2 356 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 RPL7L1Q6DKI1 246 aaKnown RBP5.27□□□□□ -1.57
LINC00640-201ENST00000554409 UBE2DNLQ8IWF7 75 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 CMTM2Q8TAZ6 248 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 ST6GAL2Q96JF0 529 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 ACTR3CQ9C0K3 210 aaPredicted RBP5.27□□□□□ -1.57
LINC00640-201ENST00000554409 SH3BGRL3Q9H299 93 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 GSN-AS1Q9NRJ2 163 aa5.27□□□□□ -1.57
LINC00640-201ENST00000554409 HMGB3O15347 200 aaKnown RBP5.26□□□□□ -1.57
LINC00640-201ENST00000554409 SPINK4O60575 86 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 CXorf1O96002 111 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 HOXA5P20719 270 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 ZNF345Q14585 488 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 Q6ZQT7 251 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 Q6ZR54 194 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 Q6ZTI0 123 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 SSX7Q7RTT5 188 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 C5orf17Q8NAS9 161 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 HYLS1Q96M11 299 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 ARPC5LQ9BPX5 153 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 TMEM167BQ9NRX6 74 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 TP53TG3Q9ULZ0 132 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 KLF12Q9Y4X4 402 aa5.26□□□□□ -1.57
LINC00640-201ENST00000554409 CTXND1A0A1B0GTU2 59 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 A0A1W2PRE2 83 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 ARPC5O15511 151 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 NUDT3O95989 172 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 TCRAP04437 139 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 GNG5P63218 68 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 ZNF415Q09FC8 603 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 TDRG1Q3Y452 100 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 LINC00336Q6ZUF6 198 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 GOLT1AQ6ZVE7 132 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 TMPRSS5Q9H3S3 457 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 CYTL1Q9NRR1 136 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 RPH3ALQ9UNE2 315 aa5.25□□□□□ -1.57
LINC00640-201ENST00000554409 TRGV11A0A075B6L2 103 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 TRGV2A0A075B6R0 118 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 TRAV26-1A0A087WT03 109 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 TRGV1A0A0A0MS02 117 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 TRAV8-1A0A0A6YYK1 113 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 TRAV21A0A0B4J279 112 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 FBLL1A6NHQ2 334 aaKnown RBP5.24□□□□□ -1.57
LINC00640-201ENST00000554409 HMSDA8MTL9 139 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 GGTLC3B5MD39 225 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 K7EQM0 130 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 CCL18P55774 89 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 OR5I1Q13606 314 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 ZNF726P1Q15940 193 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 ANKRD39Q53RE8 183 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 MUC21Q5SSG8 566 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 AKR1C8PQ5T2L2 129 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 FAM159AQ6UWV7 190 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 KCNRGQ8N5I3 272 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 TMEM75Q8N9X5 138 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 ZNRF2Q8NHG8 242 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 TVP23CQ96ET8 276 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 ATG101Q9BSB4 218 aa5.24□□□□□ -1.57
LINC00640-201ENST00000554409 SPXQ9BT56 116 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms