RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 LINC01551Q86U37 167 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 TMEM256Q8N2U0 113 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 ZFAND2AQ8N6M9 145 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 SDF2L1Q9HCN8 221 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 GCGP01275 180 aa10.67□□□□□ -0.7
SHMT2-210ENST00000553950 PFN1P07737 140 aaKnown RBP10.67□□□□□ -0.7
SHMT2-210ENST00000553950 ADCYAP1P18509 176 aa10.67□□□□□ -0.7
SHMT2-210ENST00000553950 Q6AWC8 147 aa10.67□□□□□ -0.7
SHMT2-210ENST00000553950 SVBPQ8N300 66 aa10.67□□□□□ -0.7
SHMT2-210ENST00000553950 DAZAP1Q96EP5 407 aaKnown RBP10.67□□□□□ -0.7
SHMT2-210ENST00000553950 ZC2HC1AQ96GY0 325 aa10.67□□□□□ -0.7
SHMT2-210ENST00000553950 MGAM2Q2M2H8 2515 aa10.66□□□□□ -0.7
SHMT2-210ENST00000553950 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
SHMT2-210ENST00000553950 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
SHMT2-210ENST00000553950 FABP5P3A8MUU1 101 aa10.66□□□□□ -0.7
SHMT2-210ENST00000553950 B4DEV8 164 aa10.66□□□□□ -0.7
SHMT2-210ENST00000553950 M0R2Z0 102 aa10.66□□□□□ -0.7
SHMT2-210ENST00000553950 CA1P00915 261 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-210ENST00000553950 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
SHMT2-210ENST00000553950 PRB4P10163 310 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-210ENST00000553950 RPL35AP18077 110 aaKnown RBP10.66□□□□□ -0.7
SHMT2-210ENST00000553950 RPL23P62829 140 aaKnown RBP10.66□□□□□ -0.7
SHMT2-210ENST00000553950 C15orf54Q8N8G6 183 aa10.66□□□□□ -0.7
SHMT2-210ENST00000553950 NHLRC2Q8NBF2 726 aa10.66□□□□□ -0.7
SHMT2-210ENST00000553950 C8orf49Q96NF6 230 aa10.66□□□□□ -0.7
SHMT2-210ENST00000553950 CSTL1Q9H114 145 aa10.66□□□□□ -0.7
SHMT2-210ENST00000553950 AURKAIP1Q9NWT8 199 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-210ENST00000553950 PPP1R2P9O14990 202 aa10.65□□□□□ -0.7
SHMT2-210ENST00000553950 SNAPINO95295 136 aa10.65□□□□□ -0.7
SHMT2-210ENST00000553950 IGLV2-8P01709 118 aa10.65□□□□□ -0.7
SHMT2-210ENST00000553950 RHEBQ15382 184 aa10.65□□□□□ -0.7
SHMT2-210ENST00000553950 GFI1BQ5VTD9 330 aa10.65□□□□□ -0.7
SHMT2-210ENST00000553950 PRR27Q6MZM9 219 aa10.65□□□□□ -0.7
SHMT2-210ENST00000553950 FAM231DQ6ZW35 169 aa10.65□□□□□ -0.7
SHMT2-210ENST00000553950 OCC1Q8TAD7 63 aa10.65□□□□□ -0.7
SHMT2-210ENST00000553950 GOLT1BQ9Y3E0 138 aa10.65□□□□□ -0.7
SHMT2-210ENST00000553950 XKRY2A2RUG3 117 aa10.64□□□□□ -0.71
SHMT2-210ENST00000553950 PGPEP1LA6NFU8 196 aa10.64□□□□□ -0.71
SHMT2-210ENST00000553950 M0R036 132 aa10.64□□□□□ -0.71
SHMT2-210ENST00000553950 P01737 135 aa10.64□□□□□ -0.71
SHMT2-210ENST00000553950 RNASE4P34096 147 aaKnown RBP10.64□□□□□ -0.71
SHMT2-210ENST00000553950 BTN1A1Q13410 526 aa10.64□□□□□ -0.71
SHMT2-210ENST00000553950 IBA57Q5T440 356 aaKnown RBP10.64□□□□□ -0.71
SHMT2-210ENST00000553950 ISOC2Q96AB3 205 aa10.64□□□□□ -0.71
SHMT2-210ENST00000553950 KCNS1Q96KK3 526 aa10.64□□□□□ -0.71
SHMT2-210ENST00000553950 H7BYZ3 331 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 J3KRW8 73 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 K7EN84 100 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 SH2D1AO60880 128 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 APOC3P02656 99 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 S100A1P23297 94 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 ERVFC1-1P60608 527 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 RPS20P60866 119 aaKnown RBP10.63□□□□□ -0.71
SHMT2-210ENST00000553950 SFRP2Q96HF1 295 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 TMEM208Q9BTX3 173 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 OSTCQ9NRP0 149 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 XCL2Q9UBD3 114 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
SHMT2-210ENST00000553950 TRAV12-2A0A075B6T6 113 aa10.62□□□□□ -0.71
SHMT2-210ENST00000553950 C19orf71A6NCJ1 209 aa10.62□□□□□ -0.71
SHMT2-210ENST00000553950 CRXO43186 299 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-210ENST00000553950 MT-ND4LP03901 98 aa10.62□□□□□ -0.71
SHMT2-210ENST00000553950 CXCL1P09341 107 aa10.62□□□□□ -0.71
SHMT2-210ENST00000553950 FXYD7P58549 80 aa10.62□□□□□ -0.71
SHMT2-210ENST00000553950 CT83Q5H943 113 aa10.62□□□□□ -0.71
SHMT2-210ENST00000553950 PRR9Q5T870 116 aa10.62□□□□□ -0.71
SHMT2-210ENST00000553950 FAM159AQ6UWV7 190 aa10.62□□□□□ -0.71
SHMT2-210ENST00000553950 LINC00322Q6ZN03 302 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-210ENST00000553950 ANAPC16Q96DE5 110 aa10.62□□□□□ -0.71
SHMT2-210ENST00000553950 TRAV12-3A0A0B4J271 114 aa10.61□□□□□ -0.71
SHMT2-210ENST00000553950 ATP6V1G1O75348 118 aa10.61□□□□□ -0.71
SHMT2-210ENST00000553950 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
SHMT2-210ENST00000553950 Q6ZWC4 215 aa10.61□□□□□ -0.71
SHMT2-210ENST00000553950 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
SHMT2-210ENST00000553950 RPP21Q9H633 154 aaKnown RBP10.61□□□□□ -0.71
SHMT2-210ENST00000553950 TRGV11A0A075B6L2 103 aa10.6□□□□□ -0.71
SHMT2-210ENST00000553950 GATCO43716 136 aaKnown RBP10.6□□□□□ -0.71
SHMT2-210ENST00000553950 FRMD6-AS1P0C7T7 363 aa10.6□□□□□ -0.71
SHMT2-210ENST00000553950 ZNF80P51504 273 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-210ENST00000553950 OR5I1Q13606 314 aa10.6□□□□□ -0.71
SHMT2-210ENST00000553950 TDRG1Q3Y452 100 aa10.6□□□□□ -0.71
SHMT2-210ENST00000553950 CLRN3Q8NCR9 226 aa10.6□□□□□ -0.71
SHMT2-210ENST00000553950 OR10G8Q8NGN5 311 aa10.6□□□□□ -0.71
SHMT2-210ENST00000553950 CTDSP1Q9GZU7 261 aa10.6□□□□□ -0.71
SHMT2-210ENST00000553950 TP53TG1Q9Y2A0 90 aa10.6□□□□□ -0.71
SHMT2-210ENST00000553950 IGHV1OR15-1A0A075B7D0 117 aa10.59□□□□□ -0.71
SHMT2-210ENST00000553950 A0A087WWC5 75 aa10.59□□□□□ -0.71
SHMT2-210ENST00000553950 TMEM189A5PLL7 270 aa10.59□□□□□ -0.71
SHMT2-210ENST00000553950 ZNF705GA8MUZ8 300 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-210ENST00000553950 K7EIL1 84 aa10.59□□□□□ -0.71
SHMT2-210ENST00000553950 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-210ENST00000553950 ORM1P02763 201 aa10.59□□□□□ -0.71
SHMT2-210ENST00000553950 RCHY1Q96PM5 261 aa10.59□□□□□ -0.71
SHMT2-210ENST00000553950 RNASE7Q9H1E1 156 aaKnown RBP10.59□□□□□ -0.71
SHMT2-210ENST00000553950 NAGKQ9UJ70 344 aa10.59□□□□□ -0.71
SHMT2-210ENST00000553950 DNHD1Q96M86 4753 aa10.59□□□□□ -0.71
SHMT2-210ENST00000553950 NOTCH1P46531 2555 aa10.59□□□□□ -0.71
SHMT2-210ENST00000553950 DNAH3Q8TD57 4116 aa10.58□□□□□ -0.72
SHMT2-210ENST00000553950 A8MWL6 223 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms