RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ZNF331Q9NQX6 463 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-209ENST00000553659 RBAKDNA6NC62 111 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 C19orf71A6NCJ1 209 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 IGLV2-11P01706 119 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 CT45A10P0DMU9 189 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 COA6Q5JTJ3 125 aaKnown RBP12.02□□□□□ -0.49
ACTN1-209ENST00000553659 PRR27Q6MZM9 219 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 ATP5L2Q7Z4Y8 100 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 PRNTQ86SH4 94 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 GBGT1Q8N5D6 347 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 NHLRC2Q8NBF2 726 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 C17orf77Q96MU5 243 aa12.02□□□□□ -0.49
ACTN1-209ENST00000553659 SAMD13Q5VXD3 122 aa12.01□□□□□ -0.49
ACTN1-209ENST00000553659 C16orf54Q6UWD8 224 aa12.01□□□□□ -0.49
ACTN1-209ENST00000553659 COX8CQ7Z4L0 72 aa12.01□□□□□ -0.49
ACTN1-209ENST00000553659 NDFIP1Q9BT67 221 aa12.01□□□□□ -0.49
ACTN1-209ENST00000553659 NPIPB6E9PJ23 425 aa12□□□□□ -0.49
ACTN1-209ENST00000553659 K7EMT4 169 aa12□□□□□ -0.49
ACTN1-209ENST00000553659 HLA-DQA1P01909 254 aa12□□□□□ -0.49
ACTN1-209ENST00000553659 SPATA25Q9BR10 227 aa12□□□□□ -0.49
ACTN1-209ENST00000553659 PEF1Q9UBV8 284 aaKnown RBP12□□□□□ -0.49
ACTN1-209ENST00000553659 SACSQ9NZJ4 4579 aa11.99□□□□□ -0.49
ACTN1-209ENST00000553659 IGHV3-35A0A0C4DH35 117 aa11.99□□□□□ -0.49
ACTN1-209ENST00000553659 CHEK1O14757 476 aa11.99□□□□□ -0.49
ACTN1-209ENST00000553659 KLF5Q13887 457 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-209ENST00000553659 FAM106AQ4KMX7 169 aa11.99□□□□□ -0.49
ACTN1-209ENST00000553659 Q6AWC8 147 aa11.99□□□□□ -0.49
ACTN1-209ENST00000553659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.99□□□□□ -0.49
ACTN1-209ENST00000553659 ADAMTSL5Q6ZMM2 481 aa11.99□□□□□ -0.49
ACTN1-209ENST00000553659 XKRY2A2RUG3 117 aa11.98□□□□□ -0.49
ACTN1-209ENST00000553659 SMIM6P0DI80 62 aa11.98□□□□□ -0.49
ACTN1-209ENST00000553659 S100A2P29034 98 aa11.98□□□□□ -0.49
ACTN1-209ENST00000553659 GPHB5Q86YW7 130 aa11.98□□□□□ -0.49
ACTN1-209ENST00000553659 OR9G4Q8NGQ1 327 aa11.98□□□□□ -0.49
ACTN1-209ENST00000553659 GLMPQ8WWB7 406 aa11.98□□□□□ -0.49
ACTN1-209ENST00000553659 UFC1Q9Y3C8 167 aa11.98□□□□□ -0.49
ACTN1-209ENST00000553659 TRAV8-1A0A0A6YYK1 113 aa11.97□□□□□ -0.49
ACTN1-209ENST00000553659 SNURFLB1AK76 121 aa11.97□□□□□ -0.49
ACTN1-209ENST00000553659 M0R3E3 92 aa11.97□□□□□ -0.49
ACTN1-209ENST00000553659 SMUG1Q53HV7 270 aa11.97□□□□□ -0.49
ACTN1-209ENST00000553659 LCN12Q6JVE5 192 aa11.97□□□□□ -0.49
ACTN1-209ENST00000553659 LINC00518Q8N0U6 118 aa11.97□□□□□ -0.49
ACTN1-209ENST00000553659 SGK494Q96LW2 274 aa11.97□□□□□ -0.49
ACTN1-209ENST00000553659 NEU1Q99519 415 aa11.97□□□□□ -0.49
ACTN1-209ENST00000553659 MRPL18Q9H0U6 180 aaKnown RBP11.97□□□□□ -0.49
ACTN1-209ENST00000553659 TCL1AP56279 114 aa11.96□□□□□ -0.49
ACTN1-209ENST00000553659 RPS20P60866 119 aaKnown RBP11.96□□□□□ -0.49
ACTN1-209ENST00000553659 HIST3H2BBQ8N257 126 aa11.96□□□□□ -0.49
ACTN1-209ENST00000553659 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.49
ACTN1-209ENST00000553659 EPPK1P58107 5090 aaKnown RBP11.95□□□□□ -0.5
ACTN1-209ENST00000553659 IGHV3OR16-8A0A075B7F1 116 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 IGHV7-4-1A0A0J9YVY3 117 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 A0A1B0GW15 77 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 HIGD1CA8MV81 97 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 CBLN1P23435 193 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 FOXA3P55318 350 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-209ENST00000553659 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 RBPMS2Q6ZRY4 209 aaKnown RBP11.95□□□□□ -0.5
ACTN1-209ENST00000553659 GTSCR1Q86UQ5 136 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 NUP35Q8NFH5 326 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 SIGLEC8Q9NYZ4 499 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 CSMD3Q7Z407 3707 aa11.95□□□□□ -0.5
ACTN1-209ENST00000553659 LYSTQ99698 3801 aa11.94□□□□□ -0.5
ACTN1-209ENST00000553659 CSN3P07498 182 aa11.94□□□□□ -0.5
ACTN1-209ENST00000553659 FAM162BQ5T6X4 162 aa11.94□□□□□ -0.5
ACTN1-209ENST00000553659 TMEM136Q6ZRR5 245 aa11.94□□□□□ -0.5
ACTN1-209ENST00000553659 OR2D3Q8NGH3 330 aa11.94□□□□□ -0.5
ACTN1-209ENST00000553659 ZC2HC1AQ96GY0 325 aa11.94□□□□□ -0.5
ACTN1-209ENST00000553659 PPP1R14DQ9NXH3 145 aa11.94□□□□□ -0.5
ACTN1-209ENST00000553659 STARD9Q9P2P6 4700 aa11.94□□□□□ -0.5
ACTN1-209ENST00000553659 BIRC6Q9NR09 4857 aa11.93□□□□□ -0.5
ACTN1-209ENST00000553659 ZNF207O43670 478 aaKnown RBP11.93□□□□□ -0.5
ACTN1-209ENST00000553659 CA1P00915 261 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-209ENST00000553659 TRBV12-3P01733 135 aa11.93□□□□□ -0.5
ACTN1-209ENST00000553659 APOHP02749 345 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-209ENST00000553659 HBBP68871 147 aa11.93□□□□□ -0.5
ACTN1-209ENST00000553659 MRPL54Q6P161 138 aaKnown RBP11.93□□□□□ -0.5
ACTN1-209ENST00000553659 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
ACTN1-209ENST00000553659 LINC00322Q6ZN03 302 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-209ENST00000553659 BORCS7Q96B45 105 aa11.93□□□□□ -0.5
ACTN1-209ENST00000553659 C16orf92Q96LL3 132 aa11.93□□□□□ -0.5
ACTN1-209ENST00000553659 LENEPQ9Y5L5 61 aa11.93□□□□□ -0.5
ACTN1-209ENST00000553659 IGKV2-40A0A087WW87 121 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-209ENST00000553659 IGHV3-66A0A0C4DH42 116 aa11.92□□□□□ -0.5
ACTN1-209ENST00000553659 IGKV2D-40P01614 121 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-209ENST00000553659 APCSP02743 223 aa11.92□□□□□ -0.5
ACTN1-209ENST00000553659 RAB4BP61018 213 aa11.92□□□□□ -0.5
ACTN1-209ENST00000553659 Q0VG73 95 aa11.92□□□□□ -0.5
ACTN1-209ENST00000553659 TMEM78Q5T7P6 136 aa11.92□□□□□ -0.5
ACTN1-209ENST00000553659 IL17DQ8TAD2 202 aa11.92□□□□□ -0.5
ACTN1-209ENST00000553659 SMPXQ9UHP9 88 aa11.92□□□□□ -0.5
ACTN1-209ENST00000553659 TRAV8-2A0A0B4J237 113 aa11.91□□□□□ -0.5
ACTN1-209ENST00000553659 A0A1B0GXF2 115 aa11.91□□□□□ -0.5
ACTN1-209ENST00000553659 LGALS9O00182 355 aa11.91□□□□□ -0.5
ACTN1-209ENST00000553659 CRISP2P16562 243 aa11.91□□□□□ -0.5
ACTN1-209ENST00000553659 RIGQ13278 110 aa11.91□□□□□ -0.5
ACTN1-209ENST00000553659 OR10J3Q5JRS4 329 aa11.91□□□□□ -0.5
ACTN1-209ENST00000553659 TMEM18Q96B42 140 aa11.91□□□□□ -0.5
ACTN1-209ENST00000553659 NRN1Q9NPD7 142 aa11.91□□□□□ -0.5
ACTN1-209ENST00000553659 DNAH1Q9P2D7 4330 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms