RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 TVP23CQ96ET8 276 aa14.09□□□□□ -0.15
PSEN1-207ENST00000553599 SMIM12Q96EX1 92 aa14.09□□□□□ -0.15
PSEN1-207ENST00000553599 ZMAT4Q9H898 229 aa14.09□□□□□ -0.15
PSEN1-207ENST00000553599 TRAV12-2A0A075B6T6 113 aa14.08□□□□□ -0.16
PSEN1-207ENST00000553599 SRP19P09132 144 aaKnown RBP14.08□□□□□ -0.16
PSEN1-207ENST00000553599 BAGE2Q86Y30 109 aa14.08□□□□□ -0.16
PSEN1-207ENST00000553599 TMEM183AQ8IXX5 376 aa14.08□□□□□ -0.16
PSEN1-207ENST00000553599 NIPSNAP3BQ9BS92 247 aa14.08□□□□□ -0.16
PSEN1-207ENST00000553599 DERL1Q9BUN8 251 aa14.08□□□□□ -0.16
PSEN1-207ENST00000553599 RNASE4P34096 147 aaKnown RBP14.07□□□□□ -0.16
PSEN1-207ENST00000553599 Q6AWC8 147 aa14.07□□□□□ -0.16
PSEN1-207ENST00000553599 ZNF705AQ6ZN79 300 aaPredicted RBP14.07□□□□□ -0.16
PSEN1-207ENST00000553599 ASCL2Q99929 193 aa14.07□□□□□ -0.16
PSEN1-207ENST00000553599 C9JCJ5 164 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 H7BYZ3 331 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 J3KRW8 73 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 GNG4P50150 75 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 KIR3DS1Q14943 382 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 UQCC3Q6UW78 93 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 C1orf158Q8N1D5 194 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 NEU1Q99519 415 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 OVOL2Q9BRP0 275 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 TMEM208Q9BTX3 173 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 PARLQ9H300 379 aa14.06□□□□□ -0.16
PSEN1-207ENST00000553599 TRAV12-3A0A0B4J271 114 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 TRAV21A0A0B4J279 112 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 LINC00862A6NCI5 91 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 SMIM9A6NGZ8 99 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 ZNF324O75467 553 aaPredicted RBP14.05□□□□□ -0.16
PSEN1-207ENST00000553599 BTN1A1Q13410 526 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 FAM74A3Q4VXF1 159 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 CENPWQ5EE01 88 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 PRR9Q5T870 116 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 C8orf49Q96NF6 230 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 MLST8Q9BVC4 326 aa14.05□□□□□ -0.16
PSEN1-207ENST00000553599 GCGP01275 180 aa14.04□□□□□ -0.16
PSEN1-207ENST00000553599 PFN1P07737 140 aaKnown RBP14.04□□□□□ -0.16
PSEN1-207ENST00000553599 SRSF3P84103 164 aaKnown RBP14.04□□□□□ -0.16
PSEN1-207ENST00000553599 EIF4E3Q8N5X7 224 aaKnown RBP14.04□□□□□ -0.16
PSEN1-207ENST00000553599 PYGO2Q9BRQ0 406 aa14.04□□□□□ -0.16
PSEN1-207ENST00000553599 LINC00467Q9BRT7 94 aa14.04□□□□□ -0.16
PSEN1-207ENST00000553599 BIN3Q9NQY0 253 aa14.04□□□□□ -0.16
PSEN1-207ENST00000553599 CEBPGP53567 150 aa14.03□□□□□ -0.16
PSEN1-207ENST00000553599 ZNF674Q2M3X9 581 aa14.03□□□□□ -0.16
PSEN1-207ENST00000553599 OR11H2Q8NH07 326 aa14.03□□□□□ -0.16
PSEN1-207ENST00000553599 LINC01587Q99440 93 aa14.03□□□□□ -0.16
PSEN1-207ENST00000553599 LY96Q9Y6Y9 160 aa14.03□□□□□ -0.16
PSEN1-207ENST00000553599 FABP5P3A8MUU1 101 aa14.02□□□□□ -0.17
PSEN1-207ENST00000553599 C9JQL5 133 aa14.02□□□□□ -0.17
PSEN1-207ENST00000553599 RBMY1A1P0DJD3 496 aaKnown RBP14.02□□□□□ -0.17
PSEN1-207ENST00000553599 RBMY1CP0DJD4 496 aa14.02□□□□□ -0.17
PSEN1-207ENST00000553599 MIFP14174 115 aa14.02□□□□□ -0.17
PSEN1-207ENST00000553599 RBMY1FQ15415 496 aaKnown RBP14.02□□□□□ -0.17
PSEN1-207ENST00000553599 FAM162BQ5T6X4 162 aa14.02□□□□□ -0.17
PSEN1-207ENST00000553599 ZC2HC1AQ96GY0 325 aa14.02□□□□□ -0.17
PSEN1-207ENST00000553599 SMIM7Q9BQ49 75 aa14.02□□□□□ -0.17
PSEN1-207ENST00000553599 NBEAL2Q6ZNJ1 2754 aa14.02□□□□□ -0.17
PSEN1-207ENST00000553599 TRBV20OR9-2A0A075B6H5 130 aa14.01□□□□□ -0.17
PSEN1-207ENST00000553599 IGHV3OR16-12A0A075B7B8 117 aa14.01□□□□□ -0.17
PSEN1-207ENST00000553599 ZNF727A8MUV8 499 aa14.01□□□□□ -0.17
PSEN1-207ENST00000553599 SOHLH1Q5JUK2 328 aa14.01□□□□□ -0.17
PSEN1-207ENST00000553599 COMMD7Q86VX2 200 aa14.01□□□□□ -0.17
PSEN1-207ENST00000553599 X6R8D5 127 aa14.01□□□□□ -0.17
PSEN1-207ENST00000553599 ZNF80P51504 273 aaPredicted RBP14□□□□□ -0.17
PSEN1-207ENST00000553599 RRN3P1Q2M238 152 aa14□□□□□ -0.17
PSEN1-207ENST00000553599 TDRG1Q3Y452 100 aa14□□□□□ -0.17
PSEN1-207ENST00000553599 KCNS1Q96KK3 526 aa14□□□□□ -0.17
PSEN1-207ENST00000553599 RETNQ9HD89 108 aa14□□□□□ -0.17
PSEN1-207ENST00000553599 IGHV1OR15-1A0A075B7D0 117 aa13.99□□□□□ -0.17
PSEN1-207ENST00000553599 IGLV2-8P01709 118 aa13.99□□□□□ -0.17
PSEN1-207ENST00000553599 FAM159AQ6UWV7 190 aa13.99□□□□□ -0.17
PSEN1-207ENST00000553599 ZNF493Q6ZR52 646 aa13.99□□□□□ -0.17
PSEN1-207ENST00000553599 NHLRC2Q8NBF2 726 aa13.99□□□□□ -0.17
PSEN1-207ENST00000553599 PRKDCP78527 4128 aaKnown RBP13.99□□□□□ -0.17
PSEN1-207ENST00000553599 ANXA2RQ3ZCQ2 193 aa13.98□□□□□ -0.17
PSEN1-207ENST00000553599 TMEM189A5PLL7 270 aa13.97□□□□□ -0.17
PSEN1-207ENST00000553599 SFTA3P0C7M3 94 aa13.97□□□□□ -0.17
PSEN1-207ENST00000553599 MGST1P10620 155 aaKnown RBP13.97□□□□□ -0.17
PSEN1-207ENST00000553599 CRIP1P50238 77 aa13.97□□□□□ -0.17
PSEN1-207ENST00000553599 TMEM241Q24JQ0 296 aa13.97□□□□□ -0.17
PSEN1-207ENST00000553599 OCC1Q8TAD7 63 aa13.97□□□□□ -0.17
PSEN1-207ENST00000553599 SH2D1AO60880 128 aa13.96□□□□□ -0.17
PSEN1-207ENST00000553599 Q8NAQ8 132 aa13.96□□□□□ -0.17
PSEN1-207ENST00000553599 TMEM263Q8WUH6 116 aaKnown RBP13.96□□□□□ -0.17
PSEN1-207ENST00000553599 C16orf74Q96GX8 76 aa13.96□□□□□ -0.17
PSEN1-207ENST00000553599 C11orf68Q9H3H3 251 aaKnown RBP13.96□□□□□ -0.17
PSEN1-207ENST00000553599 NAT8Q9UHE5 227 aa13.96□□□□□ -0.17
PSEN1-207ENST00000553599 TRGV11A0A075B6L2 103 aa13.95□□□□□ -0.18
PSEN1-207ENST00000553599 PGPEP1LA6NFU8 196 aa13.95□□□□□ -0.18
PSEN1-207ENST00000553599 CBY3A6NI87 242 aa13.95□□□□□ -0.18
PSEN1-207ENST00000553599 ZNF705GA8MUZ8 300 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-207ENST00000553599 HTN1P15515 57 aa13.95□□□□□ -0.18
PSEN1-207ENST00000553599 Q6ZQT7 251 aa13.95□□□□□ -0.18
PSEN1-207ENST00000553599 DAZAP1Q96EP5 407 aaKnown RBP13.95□□□□□ -0.18
PSEN1-207ENST00000553599 SDF2L1Q9HCN8 221 aa13.95□□□□□ -0.18
PSEN1-207ENST00000553599 U3KQK5 164 aa13.95□□□□□ -0.18
PSEN1-207ENST00000553599 IGHV4-28A0A0C4DH34 117 aa13.94□□□□□ -0.18
PSEN1-207ENST00000553599 LINC01559Q495D7 138 aa13.94□□□□□ -0.18
PSEN1-207ENST00000553599 MUC21Q5SSG8 566 aa13.94□□□□□ -0.18
PSEN1-207ENST00000553599 IBA57Q5T440 356 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms