RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 ARMS2P0C7Q2 107 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 RAB4AP20338 218 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 PMCHP20382 165 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 CTRLP40313 264 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 ZNF80P51504 273 aaPredicted RBP4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 CTAG1AP78358 180 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 KIR3DS1Q14943 382 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 IGFL4Q6B9Z1 124 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 LYZL1Q6UWQ5 148 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 Q6ZWC4 215 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 NIT1Q86X76 327 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 APRG1Q8IVJ8 170 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 Q8N1X5 172 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 ZNF664Q8N3J9 261 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 SIGLECL1Q8N7X8 197 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 C16orf92Q96LL3 132 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 FAM19A4Q96LR4 140 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 RCHY1Q96PM5 261 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 DAZ1Q9NQZ3 744 aaKnown RBP4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 NAGKQ9UJ70 344 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 U3KQK5 164 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 MYO18BQ8IUG5 2567 aa4.56□□□□□ -1.68
VIPAS39-204ENST00000553576 DOPEY2Q9Y3R5 2298 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 IGHV4-4A0A075B6R2 117 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 IGHV3-66A0A0C4DH42 116 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 LINC00587B1AMM8 73 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 ZNF207O43670 478 aaKnown RBP4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 LINC00614P0C842 121 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 PLA2G2AP14555 144 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 ERCC8Q13216 396 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 TMEM78Q5T7P6 136 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 FAM104BQ5XKR9 115 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 TEX43Q6ZNM6 134 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 IL17RELQ6ZVW7 336 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 RNF182Q8N6D2 247 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 MAPK1IP1LQ8NDC0 245 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 BORCS7Q96B45 105 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 URB1-AS1Q96HZ7 61 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 UBE2E2Q96LR5 201 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 Q96MF0 132 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 RHPN1-AS1Q9BWJ2 59 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 SAMD10Q9BYL1 202 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 TMEM191AQ9H0A3 160 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 ZNF702PQ9H963 129 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 NRN1Q9NPD7 142 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 UFC1Q9Y3C8 167 aa4.55□□□□□ -1.68
VIPAS39-204ENST00000553576 IGHV3OR16-13A0A075B7E8 117 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 IGHV3-49A0A0A0MS15 119 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 IGHV3-74A0A0B4J1X5 117 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 IGKV3D-20A0A0C4DH25 116 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 TSTD3H0UI37 97 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 J3QKU1 62 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 CRXO43186 299 aaPredicted RBP4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 SCGB1D1O95968 90 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 IGHV3-11P01762 117 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 PLA2G1BP04054 148 aaKnown RBP4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 LGALS1P09382 135 aaKnown RBP4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 OR5AL1P0C617 328 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 AMTP48728 403 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 TM4SF20Q53R12 229 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 FER1L6-AS1Q8NA97 138 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 Q8TAT8 98 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 DCANP1Q8TF63 244 aa4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 USP9YO00507 2555 aaPredicted RBP4.54□□□□□ -1.68
VIPAS39-204ENST00000553576 C2orf70A6NJV1 201 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 PRSS47A8MTI9 375 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 HOXA3O43365 443 aaPredicted RBP4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 SNAI2O43623 268 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 HSBP1O75506 76 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 ORM1P02763 201 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 PPBPP02775 128 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 NTF3P20783 257 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 ID1P41134 155 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 TMEM95Q3KNT9 176 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 DEFB125Q8N687 156 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 ZFAND2AQ8N6M9 145 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 Q8N976 141 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 OR8A1Q8NGG7 326 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 OR10J6PQ8NGY7 276 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 ODF3Q96PU9 254 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 FOXC2Q99958 501 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 C20orf144Q9BQM9 153 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 LAMTOR2Q9Y2Q5 125 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 ZNF469Q96JG9 3925 aaPredicted RBP4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 PTPN13Q12923 2485 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 TEX15Q9BXT5 2789 aa4.53□□□□□ -1.68
VIPAS39-204ENST00000553576 CSMD2Q7Z408 3487 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 TRAV21A0A0B4J279 112 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 KIR2DL5BA0A0G2JN68 375 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 KIR2DL5BA0A0G2JPC4 375 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 TMEM213A2RRL7 107 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 LINC01546A6NGU7 62 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 C3orf79P0CE67 100 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 DDTP30046 118 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 CACNG7P62955 275 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 PMCHL1Q16048 86 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 MRPL51Q4U2R6 128 aaKnown RBP4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 C10orf99Q6UWK7 81 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 KIR2DL5AQ8N109 375 aa4.52□□□□□ -1.69
VIPAS39-204ENST00000553576 FAM19A2Q8N3H0 131 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms