RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TCL1AP56279 114 aa12.63□□□□□ -0.39
SHMT2-206ENST00000553529 ESRGQ1W209 222 aa12.63□□□□□ -0.39
SHMT2-206ENST00000553529 OR10G4Q8NGN3 311 aa12.63□□□□□ -0.39
SHMT2-206ENST00000553529 OR10G9Q8NGN4 311 aa12.63□□□□□ -0.39
SHMT2-206ENST00000553529 OR10G7Q8NGN6 311 aa12.63□□□□□ -0.39
SHMT2-206ENST00000553529 G3V3Q6 166 aa12.62□□□□□ -0.39
SHMT2-206ENST00000553529 SPINK4O60575 86 aa12.62□□□□□ -0.39
SHMT2-206ENST00000553529 ARL14EPLP0DKL9 152 aa12.62□□□□□ -0.39
SHMT2-206ENST00000553529 M6PRP20645 277 aa12.62□□□□□ -0.39
SHMT2-206ENST00000553529 ATP6V0CP27449 155 aa12.62□□□□□ -0.39
SHMT2-206ENST00000553529 ACOT6Q3I5F7 207 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-206ENST00000553529 ANXA2RQ3ZCQ2 193 aa12.62□□□□□ -0.39
SHMT2-206ENST00000553529 LINC00336Q6ZUF6 198 aa12.62□□□□□ -0.39
SHMT2-206ENST00000553529 LINC00467Q9BRT7 94 aa12.62□□□□□ -0.39
SHMT2-206ENST00000553529 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
SHMT2-206ENST00000553529 RNF222A6NCQ9 220 aa12.61□□□□□ -0.39
SHMT2-206ENST00000553529 TNP2Q05952 138 aa12.61□□□□□ -0.39
SHMT2-206ENST00000553529 GOLT1AQ6ZVE7 132 aa12.61□□□□□ -0.39
SHMT2-206ENST00000553529 ZNF575Q86XF7 245 aa12.61□□□□□ -0.39
SHMT2-206ENST00000553529 RXFP4Q8TDU9 374 aa12.61□□□□□ -0.39
SHMT2-206ENST00000553529 AQP10Q96PS8 301 aa12.61□□□□□ -0.39
SHMT2-206ENST00000553529 A0A096LPF7 62 aa12.6□□□□□ -0.39
SHMT2-206ENST00000553529 NBDYA0A0U1RRE5 68 aa12.6□□□□□ -0.39
SHMT2-206ENST00000553529 SMLR1H3BR10 107 aa12.6□□□□□ -0.39
SHMT2-206ENST00000553529 CSN1S1P47710 185 aa12.6□□□□□ -0.39
SHMT2-206ENST00000553529 C1orf134Q5TEV5 83 aa12.6□□□□□ -0.39
SHMT2-206ENST00000553529 ZNF680Q8NEM1 530 aa12.6□□□□□ -0.39
SHMT2-206ENST00000553529 OTORQ9NRC9 128 aa12.6□□□□□ -0.39
SHMT2-206ENST00000553529 NAGKQ9UJ70 344 aa12.6□□□□□ -0.39
SHMT2-206ENST00000553529 A0A1W2PPV4 95 aa12.59□□□□□ -0.39
SHMT2-206ENST00000553529 SFTA3P0C7M3 94 aa12.59□□□□□ -0.39
SHMT2-206ENST00000553529 TAS2R45P59539 299 aa12.59□□□□□ -0.39
SHMT2-206ENST00000553529 ZNF266Q14584 549 aa12.59□□□□□ -0.39
SHMT2-206ENST00000553529 RPL7L1Q6DKI1 246 aaKnown RBP12.59□□□□□ -0.39
SHMT2-206ENST00000553529 FXYD6-FXYD2A0A087WZ82 144 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 RBAKDNA6NC62 111 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 GNRH2O43555 120 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 NMBP08949 121 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 CDC34P49427 236 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-206ENST00000553529 CCL18P55774 89 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 TMEM183BQ1AE95 376 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 TMEM183AQ8IXX5 376 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 LYPD1Q8N2G4 141 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 RAB24Q969Q5 203 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 C8orf49Q96NF6 230 aa12.58□□□□□ -0.4
SHMT2-206ENST00000553529 ZNF726P1Q15940 193 aa12.57□□□□□ -0.4
SHMT2-206ENST00000553529 ARPC5LQ9BPX5 153 aa12.57□□□□□ -0.4
SHMT2-206ENST00000553529 GIPP09681 153 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-206ENST00000553529 STAG3L2P0CL84 134 aa12.56□□□□□ -0.4
SHMT2-206ENST00000553529 STAG3L3P0CL85 134 aa12.56□□□□□ -0.4
SHMT2-206ENST00000553529 GCHFRP30047 84 aa12.56□□□□□ -0.4
SHMT2-206ENST00000553529 ZNF80P51504 273 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-206ENST00000553529 IBA57Q5T440 356 aaKnown RBP12.56□□□□□ -0.4
SHMT2-206ENST00000553529 Q6AWC8 147 aa12.56□□□□□ -0.4
SHMT2-206ENST00000553529 TMEM75Q8N9X5 138 aa12.56□□□□□ -0.4
SHMT2-206ENST00000553529 Q9H8V8 135 aa12.56□□□□□ -0.4
SHMT2-206ENST00000553529 GGTLC3B5MD39 225 aa12.55□□□□□ -0.4
SHMT2-206ENST00000553529 FHL2Q14192 279 aa12.55□□□□□ -0.4
SHMT2-206ENST00000553529 PQLC2Q6ZP29 291 aa12.55□□□□□ -0.4
SHMT2-206ENST00000553529 OR2G3Q8NGZ4 309 aa12.55□□□□□ -0.4
SHMT2-206ENST00000553529 CMTM2Q8TAZ6 248 aa12.55□□□□□ -0.4
SHMT2-206ENST00000553529 ZNF479Q96JC4 524 aa12.55□□□□□ -0.4
SHMT2-206ENST00000553529 ST6GAL2Q96JF0 529 aa12.55□□□□□ -0.4
SHMT2-206ENST00000553529 C11orf21Q9P2W6 132 aa12.55□□□□□ -0.4
SHMT2-206ENST00000553529 TNFSF18Q9UNG2 199 aa12.55□□□□□ -0.4
SHMT2-206ENST00000553529 ZNF415Q09FC8 603 aa12.54□□□□□ -0.4
SHMT2-206ENST00000553529 OR2T35Q8NGX2 323 aa12.54□□□□□ -0.4
SHMT2-206ENST00000553529 C18orf15Q96N68 181 aa12.54□□□□□ -0.4
SHMT2-206ENST00000553529 MUC4Q99102 2169 aa12.54□□□□□ -0.4
SHMT2-206ENST00000553529 IGLV2-11P01706 119 aa12.53□□□□□ -0.4
SHMT2-206ENST00000553529 TYMSP04818 313 aa12.53□□□□□ -0.4
SHMT2-206ENST00000553529 FAM3BP58499 235 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-206ENST00000553529 C6orf223Q8N319 242 aa12.53□□□□□ -0.4
SHMT2-206ENST00000553529 LINC00479Q96M42 142 aa12.53□□□□□ -0.4
SHMT2-206ENST00000553529 PSMG3Q9BT73 122 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-206ENST00000553529 IGHV3-16A0A0C4DH30 117 aa12.52□□□□□ -0.41
SHMT2-206ENST00000553529 TRBV7-9A0A0J9YWB2 115 aa12.52□□□□□ -0.41
SHMT2-206ENST00000553529 LOC100131303A0A0U1RQF7 123 aa12.52□□□□□ -0.41
SHMT2-206ENST00000553529 FGF8P55075 233 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-206ENST00000553529 IQCF2Q8IXL9 164 aa12.52□□□□□ -0.41
SHMT2-206ENST00000553529 TREM1Q9NP99 234 aa12.52□□□□□ -0.41
SHMT2-206ENST00000553529 MRPS16Q9Y3D3 137 aaKnown RBP12.52□□□□□ -0.41
SHMT2-206ENST00000553529 PAX4O43316 350 aa12.51□□□□□ -0.41
SHMT2-206ENST00000553529 TCRAP04437 139 aa12.51□□□□□ -0.41
SHMT2-206ENST00000553529 CRYBA4P53673 196 aa12.51□□□□□ -0.41
SHMT2-206ENST00000553529 FAM159AQ6UWV7 190 aa12.51□□□□□ -0.41
SHMT2-206ENST00000553529 SUN5Q8TC36 379 aa12.51□□□□□ -0.41
SHMT2-206ENST00000553529 TNFRSF18Q9Y5U5 241 aa12.51□□□□□ -0.41
SHMT2-206ENST00000553529 PCLOQ9Y6V0 5065 aa12.5□□□□□ -0.41
SHMT2-206ENST00000553529 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
SHMT2-206ENST00000553529 H3BNG1 76 aa12.5□□□□□ -0.41
SHMT2-206ENST00000553529 ARPC5O15511 151 aa12.5□□□□□ -0.41
SHMT2-206ENST00000553529 FUSP35637 526 aaKnown RBP eCLIP12.5□□□□□ -0.41
SHMT2-206ENST00000553529 UBE2G2P60604 165 aa12.5□□□□□ -0.41
SHMT2-206ENST00000553529 SUMO1P63165 101 aaKnown RBP12.5□□□□□ -0.41
SHMT2-206ENST00000553529 CYTL1Q9NRR1 136 aa12.5□□□□□ -0.41
SHMT2-206ENST00000553529 RYR1P21817 5038 aa12.49□□□□□ -0.41
SHMT2-206ENST00000553529 FAM74A1Q5RGS3 127 aa12.49□□□□□ -0.41
SHMT2-206ENST00000553529 PRNTQ86SH4 94 aa12.49□□□□□ -0.41
SHMT2-206ENST00000553529 TMED6Q8WW62 240 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms