RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 DCANP1Q8TF63 244 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 TMEM37Q8WXS4 190 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 GPR82Q96P67 336 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 PFDN5Q99471 154 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 ATP5SQ99766 215 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 OVOL2Q9BRP0 275 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 SHANK2-AS3Q9BTD1 123 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 TMEM208Q9BTX3 173 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 C11orf1Q9H5F2 150 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 RNF24Q9Y225 148 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 RFNGQ9Y644 331 aa3.4□□□□□ -1.87
ATXN3-220ENST00000553491 KIR2DL5BA0A0G2JN68 375 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 KIR2DL5BA0A0G2JPC4 375 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 H3BRN7 92 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 ISLRO14498 428 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 HMGB3O15347 200 aaKnown RBP3.39□□□□□ -1.87
ATXN3-220ENST00000553491 OR7C2O60412 319 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATXN3-220ENST00000553491 GIPP09681 153 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-220ENST00000553491 OR10J4P0C629 311 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
ATXN3-220ENST00000553491 PSMB3P49720 205 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 PSG9Q00887 426 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 HIST1H1AQ02539 215 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-220ENST00000553491 PSG3Q16557 428 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 Q5BKY6 102 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 GCSAMLQ5JQS6 135 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 GDF5OSQ5U4N7 250 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 MORN3Q6PF18 240 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-220ENST00000553491 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 Q6ZVQ6 151 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 MIR17HGQ75NE6 70 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 KIR2DL5AQ8N109 375 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 HSD17B11Q8NBQ5 300 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 ZNF680Q8NEM1 530 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 OR2T35Q8NGX2 323 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 KIR2DL5BQ8NHK3 375 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 NPCDR1Q9BY65 106 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 WDR61Q9GZS3 305 aaKnown RBP3.39□□□□□ -1.87
ATXN3-220ENST00000553491 MFFQ9GZY8 342 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 WFDC1Q9HC57 220 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 RPH3ALQ9UNE2 315 aa3.39□□□□□ -1.87
ATXN3-220ENST00000553491 BORCS7-ASMTA0A0B4J1R7 106 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 KRBOX1C9JBD0 128 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 H3BMM0 161 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 H3BQ15 152 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 ARPC5O15511 151 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 DUSP14O95147 198 aaKnown RBP3.38□□□□□ -1.87
ATXN3-220ENST00000553491 PYYP10082 97 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 PLP1P60201 277 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 RANP62826 216 aaKnown RBP3.38□□□□□ -1.87
ATXN3-220ENST00000553491 ACOT6Q3I5F7 207 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-220ENST00000553491 SPATA31B1PQ5VZV4 182 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 CD164L2Q6UWJ8 174 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 FOXI2Q6ZQN5 318 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 IQCF2Q8IXL9 164 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 EIF4E3Q8N5X7 224 aaKnown RBP3.38□□□□□ -1.87
ATXN3-220ENST00000553491 OR10G4Q8NGN3 311 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 OR10G9Q8NGN4 311 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 OR10G7Q8NGN6 311 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 OR10J6PQ8NGY7 276 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 C11orf45Q8TAV5 145 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 RPUSD4Q96CM3 377 aaKnown RBP3.38□□□□□ -1.87
ATXN3-220ENST00000553491 PAXXQ9BUH6 204 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 SLC35B3Q9H1N7 401 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 OR51M1Q9H341 326 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 SAV1Q9H4B6 383 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-220ENST00000553491 KCNIP2Q9NS61 270 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 ZNF586Q9NXT0 402 aa3.38□□□□□ -1.87
ATXN3-220ENST00000553491 TENM3Q9P273 2699 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 TRAV12-2A0A075B6T6 113 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 TRAV8-2A0A0B4J237 113 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 A0A0J9YX75 114 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 C3orf84H3BNL1 204 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 M0R2Z0 102 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 NBEAP1P0C6P0 100 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 HIST1H1EP10412 219 aaKnown RBP3.37□□□□□ -1.87
ATXN3-220ENST00000553491 HLA-DRB4P13762 266 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 CNN1P51911 297 aaKnown RBP3.37□□□□□ -1.87
ATXN3-220ENST00000553491 RAB2AP61019 212 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 ERCC8Q13216 396 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 SPINK13Q1W4C9 94 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-220ENST00000553491 SAMD13Q5VXD3 122 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 LCN15Q6UWW0 184 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 SLC51BQ86UW2 128 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 EXOC3-AS1Q8N2X6 119 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 OR2G3Q8NGZ4 309 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 LINC01587Q99440 93 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 SLC50A1Q9BRV3 221 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 SLC25A2Q9BXI2 301 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 FUT9Q9Y231 359 aa3.37□□□□□ -1.87
ATXN3-220ENST00000553491 GOLT1BQ9Y3E0 138 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms