RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 SLC35B3Q9H1N7 401 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 ZFP30Q9Y2G7 519 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 RBMY1BA6NDE4 496 aaKnown RBP7.14□□□□□ -1.27
TMEM260-204ENST00000553335 RBMY1EA6NEQ0 496 aaKnown RBP7.14□□□□□ -1.27
TMEM260-204ENST00000553335 CA1P00915 261 aaPredicted RBP7.14□□□□□ -1.27
TMEM260-204ENST00000553335 IGLV2-11P01706 119 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 RBMY1DP0C7P1 496 aaKnown RBP7.14□□□□□ -1.27
TMEM260-204ENST00000553335 CRISP2P16562 243 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 GNG4P50150 75 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 FXYD7P58549 80 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 SRSF3P84103 164 aaKnown RBP7.14□□□□□ -1.27
TMEM260-204ENST00000553335 SPINK13Q1W4C9 94 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 ZNF674Q2M3X9 581 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 Q86TA4 180 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 COMMD7Q86VX2 200 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 FAM19A4Q96LR4 140 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 PARLQ9H300 379 aa7.14□□□□□ -1.27
TMEM260-204ENST00000553335 C9JCJ5 164 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 J3KRW8 73 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 M0R2Z0 102 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 INSP01308 110 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 LTAP01374 205 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 FAM74A3Q4VXF1 159 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 SMUG1Q53HV7 270 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 BAGE2Q86Y30 109 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 EIF4E3Q8N5X7 224 aaKnown RBP7.13□□□□□ -1.27
TMEM260-204ENST00000553335 SMIM12Q96EX1 92 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 IGF2BP2-AS1Q96M15 143 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 C20orf144Q9BQM9 153 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 DERL1Q9BUN8 251 aa7.13□□□□□ -1.27
TMEM260-204ENST00000553335 TRAV12-2A0A075B6T6 113 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 C7orf71A4D174 169 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 ZNF727A8MUV8 499 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 KLLNB2CW77 178 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 GCGP01275 180 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 CENPWQ5EE01 88 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 SOHLH1Q5JUK2 328 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 TMEM183AQ8IXX5 376 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 C8orf49Q96NF6 230 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 ASCL2Q99929 193 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 SMIM7Q9BQ49 75 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 NIPSNAP3BQ9BS92 247 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 BIN3Q9NQY0 253 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 XCL2Q9UBD3 114 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 PLA2G2DQ9UNK4 145 aa7.12□□□□□ -1.27
TMEM260-204ENST00000553335 TRAV12-3A0A0B4J271 114 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 TRAV21A0A0B4J279 112 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 C9JQL5 133 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 CRXO43186 299 aaPredicted RBP7.11□□□□□ -1.27
TMEM260-204ENST00000553335 SFTA3P0C7M3 94 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 RNASE4P34096 147 aaKnown RBP7.11□□□□□ -1.27
TMEM260-204ENST00000553335 NDUFA5Q16718 116 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 GFI1BQ5VTD9 330 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 Q6ZWC4 215 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 COX8CQ7Z4L0 72 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 TMEM256Q8N2U0 113 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 ZFAND2AQ8N6M9 145 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 TVP23CQ96ET8 276 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 TMEM208Q9BTX3 173 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 GOLT1BQ9Y3E0 138 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 MEGF8Q7Z7M0 2845 aa7.11□□□□□ -1.27
TMEM260-204ENST00000553335 FABP5P3A8MUU1 101 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 MGST1P10620 155 aaKnown RBP7.1□□□□□ -1.27
TMEM260-204ENST00000553335 BTN1A1Q13410 526 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 Q6AWC8 147 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 NHLRC2Q8NBF2 726 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 CSNK1G2-AS1Q8NCQ2 148 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 ZC2HC1AQ96GY0 325 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 RCHY1Q96PM5 261 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 MLST8Q9BVC4 326 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 NAT8Q9UHE5 227 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 LY96Q9Y6Y9 160 aa7.1□□□□□ -1.27
TMEM260-204ENST00000553335 TRBV20OR9-2A0A075B6H5 130 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 IGHV3OR16-12A0A075B7B8 117 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 TMEM218A2RU14 115 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 F8W036 122 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 H7BYZ3 331 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 SPRY2O43597 315 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 IGLV2-8P01709 118 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 PFN1P07737 140 aaKnown RBP7.09□□□□□ -1.27
TMEM260-204ENST00000553335 GIG44P09565 113 aaPredicted RBP7.09□□□□□ -1.27
TMEM260-204ENST00000553335 TMEM241Q24JQ0 296 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 DEFB135Q30KP9 77 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 PRR9Q5T870 116 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 PRR27Q6MZM9 219 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 SBSPONQ8IVN8 264 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 OCC1Q8TAD7 63 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 RNF183Q96D59 192 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 DAZAP1Q96EP5 407 aaKnown RBP7.09□□□□□ -1.27
TMEM260-204ENST00000553335 LINC01587Q99440 93 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 B9D2Q9BPU9 175 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 SPATA25Q9BR10 227 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 TP53TG1Q9Y2A0 90 aa7.09□□□□□ -1.27
TMEM260-204ENST00000553335 PGPEP1LA6NFU8 196 aa7.08□□□□□ -1.28
TMEM260-204ENST00000553335 ZNF324O75467 553 aaPredicted RBP7.08□□□□□ -1.28
TMEM260-204ENST00000553335 ZNF80P51504 273 aaPredicted RBP7.08□□□□□ -1.28
TMEM260-204ENST00000553335 FAM162BQ5T6X4 162 aa7.08□□□□□ -1.28
TMEM260-204ENST00000553335 FAM159AQ6UWV7 190 aa7.08□□□□□ -1.28
TMEM260-204ENST00000553335 C1orf158Q8N1D5 194 aa7.08□□□□□ -1.28
TMEM260-204ENST00000553335 KCNS1Q96KK3 526 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms