RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 GIPP09681 153 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-207ENST00000553290 RAB2AP61019 212 aa9.03□□□□□ -0.96
ACTN1-207ENST00000553290 OR2G3Q8NGZ4 309 aa9.03□□□□□ -0.96
ACTN1-207ENST00000553290 ZNRF2Q8NHG8 242 aa9.03□□□□□ -0.96
ACTN1-207ENST00000553290 CMTM2Q8TAZ6 248 aa9.03□□□□□ -0.96
ACTN1-207ENST00000553290 TMED6Q8WW62 240 aa9.03□□□□□ -0.96
ACTN1-207ENST00000553290 HYLS1Q96M11 299 aa9.03□□□□□ -0.96
ACTN1-207ENST00000553290 PSMG3Q9BT73 122 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-207ENST00000553290 LINC00588Q9Y4M8 146 aa9.03□□□□□ -0.96
ACTN1-207ENST00000553290 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
ACTN1-207ENST00000553290 EIF3GO75821 320 aaKnown RBP eCLIP9.02□□□□□ -0.97
ACTN1-207ENST00000553290 CDC34P49427 236 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-207ENST00000553290 SERF2P84101 59 aa9.02□□□□□ -0.97
ACTN1-207ENST00000553290 Q6AWC8 147 aa9.02□□□□□ -0.97
ACTN1-207ENST00000553290 SSX7Q7RTT5 188 aa9.02□□□□□ -0.97
ACTN1-207ENST00000553290 HSD17B11Q8NBQ5 300 aa9.02□□□□□ -0.97
ACTN1-207ENST00000553290 TP53TG3Q9ULZ0 132 aa9.02□□□□□ -0.97
ACTN1-207ENST00000553290 DNAH2Q9P225 4427 aa9.01□□□□□ -0.97
ACTN1-207ENST00000553290 NBDYA0A0U1RRE5 68 aa9.01□□□□□ -0.97
ACTN1-207ENST00000553290 MBP02144 154 aa9.01□□□□□ -0.97
ACTN1-207ENST00000553290 ZNF415Q09FC8 603 aa9.01□□□□□ -0.97
ACTN1-207ENST00000553290 Q6ZQT7 251 aa9.01□□□□□ -0.97
ACTN1-207ENST00000553290 INO80EQ8NBZ0 244 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-207ENST00000553290 FAT2Q9NYQ8 4349 aa9.01□□□□□ -0.97
ACTN1-207ENST00000553290 DNAH17Q9UFH2 4485 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 HMGB3O15347 200 aaKnown RBP9□□□□□ -0.97
ACTN1-207ENST00000553290 STAG3L2P0CL84 134 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 STAG3L3P0CL85 134 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 ARL14EPLP0DKL9 152 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 ATP6V0CP27449 155 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 Q5BKY6 102 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 FAM159AQ6UWV7 190 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 ST6GAL2Q96JF0 529 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 Q9H8V8 135 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 RPH3ALQ9UNE2 315 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 MUC4Q99102 2169 aa9□□□□□ -0.97
ACTN1-207ENST00000553290 TRGV11A0A075B6L2 103 aa8.99□□□□□ -0.97
ACTN1-207ENST00000553290 MUC21Q5SSG8 566 aa8.99□□□□□ -0.97
ACTN1-207ENST00000553290 GOLT1AQ6ZVE7 132 aa8.99□□□□□ -0.97
ACTN1-207ENST00000553290 RAB24Q969Q5 203 aa8.99□□□□□ -0.97
ACTN1-207ENST00000553290 VSIG2Q96IQ7 327 aa8.99□□□□□ -0.97
ACTN1-207ENST00000553290 SPXQ9BT56 116 aa8.99□□□□□ -0.97
ACTN1-207ENST00000553290 MRPL16Q9NX20 251 aaKnown RBP8.99□□□□□ -0.97
ACTN1-207ENST00000553290 SERTM2A0A1B0GWG4 89 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 GCHFRP30047 84 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 SLAQ13239 276 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 ESRGQ1W209 222 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 RGS21Q2M5E4 152 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 TDRG1Q3Y452 100 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 C6orf223Q8N319 242 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 SUN5Q8TC36 379 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 UPK3BQ9BT76 320 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 TNFSF18Q9UNG2 199 aa8.98□□□□□ -0.97
ACTN1-207ENST00000553290 PKHD1P08F94 4074 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 FXYD6-FXYD2A0A087WZ82 144 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 A0A096LPF7 62 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 BORCS7-ASMTA0A0B4J1R7 106 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 TRAV21A0A0B4J279 112 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 RNF222A6NCQ9 220 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 PAX4O43316 350 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 CXorf1O96002 111 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 TMEM183BQ1AE95 376 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 TTC32Q5I0X7 151 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 TMEM183AQ8IXX5 376 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 C5orf17Q8NAS9 161 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 OR2T35Q8NGX2 323 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 ACTR3CQ9C0K3 210 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-207ENST00000553290 SH3BGRL3Q9H299 93 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 TMEM167BQ9NRX6 74 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 MDFICQ9P1T7 246 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 PRO0255Q9UI72 69 aa8.97□□□□□ -0.97
ACTN1-207ENST00000553290 MRPS16Q9Y3D3 137 aaKnown RBP8.97□□□□□ -0.97
ACTN1-207ENST00000553290 TRAV8-1A0A0A6YYK1 113 aa8.96□□□□□ -0.98
ACTN1-207ENST00000553290 K7EQM0 130 aa8.96□□□□□ -0.98
ACTN1-207ENST00000553290 IGHV3-53P01767 116 aa8.96□□□□□ -0.98
ACTN1-207ENST00000553290 GNG5P63218 68 aa8.96□□□□□ -0.98
ACTN1-207ENST00000553290 RPL7L1Q6DKI1 246 aaKnown RBP8.96□□□□□ -0.98
ACTN1-207ENST00000553290 RASL10AQ92737 203 aa8.96□□□□□ -0.98
ACTN1-207ENST00000553290 NDFIP1Q9BT67 221 aa8.96□□□□□ -0.98
ACTN1-207ENST00000553290 NAGKQ9UJ70 344 aa8.96□□□□□ -0.98
ACTN1-207ENST00000553290 HHLA3Q9XRX5 114 aa8.96□□□□□ -0.98
ACTN1-207ENST00000553290 ICOSQ9Y6W8 199 aa8.96□□□□□ -0.98
ACTN1-207ENST00000553290 A0A1W2PPQ1 181 aa8.95□□□□□ -0.98
ACTN1-207ENST00000553290 TCRAP04437 139 aa8.95□□□□□ -0.98
ACTN1-207ENST00000553290 FHL2Q14192 279 aa8.95□□□□□ -0.98
ACTN1-207ENST00000553290 TVP23CQ96ET8 276 aa8.95□□□□□ -0.98
ACTN1-207ENST00000553290 KCNS1Q96KK3 526 aa8.95□□□□□ -0.98
ACTN1-207ENST00000553290 TRGV4A0A0C4DH28 118 aa8.94□□□□□ -0.98
ACTN1-207ENST00000553290 F6UZH7 168 aa8.94□□□□□ -0.98
ACTN1-207ENST00000553290 CRYBA4P53673 196 aa8.94□□□□□ -0.98
ACTN1-207ENST00000553290 SUMO1P63165 101 aaKnown RBP8.94□□□□□ -0.98
ACTN1-207ENST00000553290 IQCF2Q8IXL9 164 aa8.94□□□□□ -0.98
ACTN1-207ENST00000553290 C8orf49Q96NF6 230 aa8.94□□□□□ -0.98
ACTN1-207ENST00000553290 SDF2L1Q9HCN8 221 aa8.94□□□□□ -0.98
ACTN1-207ENST00000553290 PKD1P98161 4303 aa8.94□□□□□ -0.98
ACTN1-207ENST00000553290 IGHV3-16A0A0C4DH30 117 aa8.93□□□□□ -0.98
ACTN1-207ENST00000553290 CTXND1A0A1B0GTU2 59 aa8.93□□□□□ -0.98
ACTN1-207ENST00000553290 A0A1W2PRE2 83 aa8.93□□□□□ -0.98
ACTN1-207ENST00000553290 FBLL1A6NHQ2 334 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms