RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 MAP1LC3AQ9H492 121 aa4.61□□□□□ -1.67
CHMP4A-210ENST00000552620 NXT2Q9NPJ8 142 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-210ENST00000552620 PEF1Q9UBV8 284 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-210ENST00000552620 SMPXQ9UHP9 88 aa4.61□□□□□ -1.67
CHMP4A-210ENST00000552620 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-210ENST00000552620 DSPP15924 2871 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 IGKV2-40A0A087WW87 121 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 TMSB15BA0A087X1C1 80 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 A0A096LNJ9 63 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 TRBV7-1A0A0A6YYK4 115 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 A0A1W2PRD5 423 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 A0A1W2PRF3 423 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 A0A1W2PRM7 423 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 TMEM213A2RRL7 107 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 A6NDN8 102 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 OR2T8A6NH00 312 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 BUB3O43684 328 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 NDUFS7O75251 213 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 ATP5LO75964 103 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 NCR2O95944 276 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 IGKV2D-40P01614 121 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 IGHG4P01861 327 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 ORM1P02763 201 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 SRD5A1P18405 259 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 FCER1GP30273 86 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 CDKN1BP46527 198 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 PROK1P58294 105 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 NDPQ00604 133 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 HSD52Q0P140 79 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 PIK3CD-AS1Q5SR53 167 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 C2orf91Q6ZV80 131 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 SMIM15Q7Z3B0 74 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 BOD1L2Q8IYS8 172 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 OR8A1Q8NGG7 326 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 RNF185Q96GF1 192 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 VGLL1Q99990 258 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 SIRPDQ9H106 197 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 S4R3C0 116 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 WDFY4Q6ZS81 3184 aa4.6□□□□□ -1.67
CHMP4A-210ENST00000552620 NBEAQ8NFP9 2946 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 IGHV4-4A0A075B6R2 117 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 MUC21A0A0G2JKD1 596 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 MUC21A0A140T8X8 626 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 CNOT1A5YKK6 2376 aaKnown RBP4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 H0Y8G0 127 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 ABCA1O95477 2261 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 FSHBP01225 129 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 NPYP01303 97 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 FGF6P10767 208 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 ZNF80P51504 273 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 CACNG7P62955 275 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 ADORA2A-AS1P86434 159 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 LOXL1Q08397 574 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 EP300Q09472 2414 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 MUC21Q5SSG8 566 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 Q6ZVH6 145 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 GTF2H5Q6ZYL4 71 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 Q71RC1 249 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 ZNF575Q86XF7 245 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 DYNAPQ8N1N2 210 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 EEF1AKMT3Q96AZ1 226 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 METTL26Q96S19 204 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 MCRIP2Q9BUT9 160 aaKnown RBP4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 TIMM8BQ9Y5J9 83 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 LENEPQ9Y5L5 61 aa4.59□□□□□ -1.67
CHMP4A-210ENST00000552620 PRRC2CQ9Y520 2896 aaKnown RBP4.59□□□□□ -1.68
CHMP4A-210ENST00000552620 POLEQ07864 2286 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 BDP1A6H8Y1 2624 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 IGHV3-23P01764 117 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 HLA-DRB4P13762 266 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 EFNA4P52798 201 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 RBX1P62877 108 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 C15orf32Q32M92 178 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 FAM106AQ4KMX7 169 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 TMEM78Q5T7P6 136 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 AMMECR1LQ6DCA0 310 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 C9orf47Q6ZRZ4 202 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 Q8N8P6 123 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 RNASE8Q8TDE3 154 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 AP1S3Q96PC3 154 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 HIGD1BQ9P298 99 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 HLA-DRB4X5D2U9 266 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 ROS1P08922 2347 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 DMDP11532 3685 aa4.58□□□□□ -1.68
CHMP4A-210ENST00000552620 PCNX1Q96RV3 2341 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 PKDREJQ9NTG1 2253 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 CENPVL3A0A0U1RRI6 287 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 CLPSL1A2RUU4 121 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 C7orf71A4D174 169 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 GAGE12JA6NER3 117 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 FAM223BA6NKX1 122 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 LY6HO94772 140 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 BRI3O95415 125 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 EVI2AP22794 236 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 HLA-DMBP28068 263 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 LEPP41159 167 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 ATP5G2Q06055 141 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 COTL1Q14019 142 aa4.57□□□□□ -1.68
CHMP4A-210ENST00000552620 PRSS57Q6UWY2 283 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms