RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 RNF222A6NCQ9 220 aa10□□□□□ -0.81
CACNB3-220ENST00000551716 SSSCA1O60232 199 aa10□□□□□ -0.81
CACNB3-220ENST00000551716 SFT2D2O95562 160 aa10□□□□□ -0.81
CACNB3-220ENST00000551716 FAUP35544 74 aaKnown RBP10□□□□□ -0.81
CACNB3-220ENST00000551716 RAB2BQ8WUD1 216 aa10□□□□□ -0.81
CACNB3-220ENST00000551716 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
CACNB3-220ENST00000551716 RSL24D1Q9UHA3 163 aaKnown RBP10□□□□□ -0.81
CACNB3-220ENST00000551716 CIDEAO60543 219 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 GATA1P15976 413 aaPredicted RBP9.99□□□□□ -0.81
CACNB3-220ENST00000551716 ZNF138P52744 262 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 TAS2R30P59541 319 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 PRR9Q5T870 116 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 FAM159AQ6UWV7 190 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 Q6ZQT7 251 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 DIRAS2Q96HU8 199 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 MGST2Q99735 147 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 GTSF1LQ9H1H1 148 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 TMEM14CQ9P0S9 112 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 PKHD1L1Q86WI1 4243 aa9.99□□□□□ -0.81
CACNB3-220ENST00000551716 TRAV8-1A0A0A6YYK1 113 aa9.98□□□□□ -0.81
CACNB3-220ENST00000551716 GGTLC3B5MD39 225 aa9.98□□□□□ -0.81
CACNB3-220ENST00000551716 M0R2P5 195 aa9.98□□□□□ -0.81
CACNB3-220ENST00000551716 CTDSP2O14595 271 aa9.98□□□□□ -0.81
CACNB3-220ENST00000551716 TSC22D2O75157 780 aa9.98□□□□□ -0.81
CACNB3-220ENST00000551716 CCNKO75909 580 aa9.98□□□□□ -0.81
CACNB3-220ENST00000551716 ASIPP42127 132 aa9.98□□□□□ -0.81
CACNB3-220ENST00000551716 CAMLGP49069 296 aa9.98□□□□□ -0.81
CACNB3-220ENST00000551716 MUC21Q5SSG8 566 aa9.98□□□□□ -0.81
CACNB3-220ENST00000551716 SLC25A21Q9BQT8 299 aaPredicted RBP9.98□□□□□ -0.81
CACNB3-220ENST00000551716 NDUFB4O95168 129 aa9.97□□□□□ -0.81
CACNB3-220ENST00000551716 HNRNPA3P51991 378 aaKnown RBP9.97□□□□□ -0.81
CACNB3-220ENST00000551716 ZNF266Q14584 549 aa9.97□□□□□ -0.81
CACNB3-220ENST00000551716 BAK1Q16611 211 aa9.97□□□□□ -0.81
CACNB3-220ENST00000551716 CTF1Q16619 201 aa9.97□□□□□ -0.81
CACNB3-220ENST00000551716 TMEM183BQ1AE95 376 aa9.97□□□□□ -0.81
CACNB3-220ENST00000551716 FAM122CQ6P4D5 195 aa9.97□□□□□ -0.81
CACNB3-220ENST00000551716 TMEM183AQ8IXX5 376 aa9.97□□□□□ -0.81
CACNB3-220ENST00000551716 DYNC2LI1Q8TCX1 351 aa9.97□□□□□ -0.81
CACNB3-220ENST00000551716 IGKV2-40A0A087WW87 121 aaPredicted RBP9.96□□□□□ -0.82
CACNB3-220ENST00000551716 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.82
CACNB3-220ENST00000551716 IGKV2D-40P01614 121 aaPredicted RBP9.96□□□□□ -0.82
CACNB3-220ENST00000551716 SEC11BP0C7V7 166 aa9.96□□□□□ -0.82
CACNB3-220ENST00000551716 UBE2MP61081 183 aaKnown RBP9.96□□□□□ -0.82
CACNB3-220ENST00000551716 PPP1R1AQ13522 171 aa9.96□□□□□ -0.82
CACNB3-220ENST00000551716 RHOHQ15669 191 aa9.96□□□□□ -0.82
CACNB3-220ENST00000551716 VWC2Q2TAL6 325 aa9.96□□□□□ -0.82
CACNB3-220ENST00000551716 EXOC3-AS1Q8N2X6 119 aa9.96□□□□□ -0.82
CACNB3-220ENST00000551716 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.82
CACNB3-220ENST00000551716 SLC39A9Q9NUM3 307 aa9.96□□□□□ -0.82
CACNB3-220ENST00000551716 IGHV3-16A0A0C4DH30 117 aa9.95□□□□□ -0.82
CACNB3-220ENST00000551716 FBLL1A6NHQ2 334 aaKnown RBP9.95□□□□□ -0.82
CACNB3-220ENST00000551716 ATP6V1G2O95670 118 aa9.95□□□□□ -0.82
CACNB3-220ENST00000551716 AP3S2P59780 193 aa9.95□□□□□ -0.82
CACNB3-220ENST00000551716 GPN1Q9HCN4 374 aaPredicted RBP9.95□□□□□ -0.82
CACNB3-220ENST00000551716 C14orf177Q52M58 125 aa9.94□□□□□ -0.82
CACNB3-220ENST00000551716 MIC13Q5XKP0 118 aa9.94□□□□□ -0.82
CACNB3-220ENST00000551716 Q6AWC8 147 aa9.94□□□□□ -0.82
CACNB3-220ENST00000551716 NRARPQ7Z6K4 114 aa9.94□□□□□ -0.82
CACNB3-220ENST00000551716 HSD17B11Q8NBQ5 300 aa9.94□□□□□ -0.82
CACNB3-220ENST00000551716 ATP5SQ99766 215 aa9.94□□□□□ -0.82
CACNB3-220ENST00000551716 C20orf85Q9H1P6 137 aa9.94□□□□□ -0.82
CACNB3-220ENST00000551716 RPL29P47914 159 aaKnown RBP9.93□□□□□ -0.82
CACNB3-220ENST00000551716 ARL16Q0P5N6 197 aa9.93□□□□□ -0.82
CACNB3-220ENST00000551716 FFAR4Q5NUL3 377 aa9.93□□□□□ -0.82
CACNB3-220ENST00000551716 MCFD2Q8NI22 146 aa9.93□□□□□ -0.82
CACNB3-220ENST00000551716 SOSTQ9BQB4 213 aa9.93□□□□□ -0.82
CACNB3-220ENST00000551716 RBAKDNA6NC62 111 aa9.92□□□□□ -0.82
CACNB3-220ENST00000551716 CSN1S1P47710 185 aa9.92□□□□□ -0.82
CACNB3-220ENST00000551716 DAZ4Q86SG3 579 aaKnown RBP9.92□□□□□ -0.82
CACNB3-220ENST00000551716 C2orf50Q96LR7 162 aa9.92□□□□□ -0.82
CACNB3-220ENST00000551716 OR51M1Q9H341 326 aa9.92□□□□□ -0.82
CACNB3-220ENST00000551716 DPH3P1Q9H4G8 78 aa9.92□□□□□ -0.82
CACNB3-220ENST00000551716 DAZ3Q9NR90 486 aaKnown RBP9.92□□□□□ -0.82
CACNB3-220ENST00000551716 LENEPQ9Y5L5 61 aa9.92□□□□□ -0.82
CACNB3-220ENST00000551716 TNXBP22105 4242 aa9.91□□□□□ -0.82
CACNB3-220ENST00000551716 IGKV2D-24A0A075B6R9 120 aa9.91□□□□□ -0.82
CACNB3-220ENST00000551716 A0A087WWC5 75 aa9.91□□□□□ -0.82
CACNB3-220ENST00000551716 A0A0D9SG52 128 aa9.91□□□□□ -0.82
CACNB3-220ENST00000551716 OR10J4P0C629 311 aa9.91□□□□□ -0.82
CACNB3-220ENST00000551716 DEDD2Q8WXF8 326 aa9.91□□□□□ -0.82
CACNB3-220ENST00000551716 RPH3ALQ9UNE2 315 aa9.91□□□□□ -0.82
CACNB3-220ENST00000551716 URGCP-MRPS24S4R325 110 aa9.91□□□□□ -0.82
CACNB3-220ENST00000551716 SCGB1D2O95969 90 aa9.9□□□□□ -0.82
CACNB3-220ENST00000551716 NBEAP1P0C6P0 100 aa9.9□□□□□ -0.82
CACNB3-220ENST00000551716 PYYP10082 97 aa9.9□□□□□ -0.82
CACNB3-220ENST00000551716 Q8TAT8 98 aa9.9□□□□□ -0.82
CACNB3-220ENST00000551716 CHAC2Q8WUX2 184 aa9.9□□□□□ -0.82
CACNB3-220ENST00000551716 NAA50Q9GZZ1 169 aaKnown RBP9.9□□□□□ -0.82
CACNB3-220ENST00000551716 NAGKQ9UJ70 344 aa9.9□□□□□ -0.82
CACNB3-220ENST00000551716 C9orf170A2RU37 121 aa9.89□□□□□ -0.83
CACNB3-220ENST00000551716 C7orf66A4D0T2 115 aa9.89□□□□□ -0.83
CACNB3-220ENST00000551716 GNRH2O43555 120 aa9.89□□□□□ -0.83
CACNB3-220ENST00000551716 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
CACNB3-220ENST00000551716 Q8N3U1 123 aa9.89□□□□□ -0.83
CACNB3-220ENST00000551716 TOMM5Q8N4H5 51 aa9.89□□□□□ -0.83
CACNB3-220ENST00000551716 OR10G9Q8NGN4 311 aa9.89□□□□□ -0.83
CACNB3-220ENST00000551716 UQCC1Q9NVA1 299 aa9.89□□□□□ -0.83
CACNB3-220ENST00000551716 WDR83OSQ9Y284 106 aa9.89□□□□□ -0.83
CACNB3-220ENST00000551716 L7N2F9 121 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms