RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 ZFP36P26651 326 aaKnown RBP16.52■□□□□ 0.23
NPAS3-210ENST00000551492 DTX2Q86UW9 622 aa16.52■□□□□ 0.23
NPAS3-210ENST00000551492 CITED2Q99967 270 aaPredicted RBP16.52■□□□□ 0.23
NPAS3-210ENST00000551492 A0A096LNJ9 63 aa16.51■□□□□ 0.23
NPAS3-210ENST00000551492 TRBV6-6A0A0A6YYG2 114 aa16.51■□□□□ 0.23
NPAS3-210ENST00000551492 C17orf98A8MV24 154 aa16.51■□□□□ 0.23
NPAS3-210ENST00000551492 PLA2G2AP14555 144 aa16.51■□□□□ 0.23
NPAS3-210ENST00000551492 LINC01587Q99440 93 aa16.51■□□□□ 0.23
NPAS3-210ENST00000551492 PSMB2P49721 201 aa16.51■□□□□ 0.23
NPAS3-210ENST00000551492 RPEQ96AT9 228 aa16.51■□□□□ 0.23
NPAS3-210ENST00000551492 IGHV3OR16-10A0A075B7F0 116 aa16.51■□□□□ 0.23
NPAS3-210ENST00000551492 C1orf159Q96HA4 380 aa16.51■□□□□ 0.23
NPAS3-210ENST00000551492 COX6B1P14854 86 aa16.5■□□□□ 0.23
NPAS3-210ENST00000551492 BRWD1-AS2P59051 145 aa16.5■□□□□ 0.23
NPAS3-210ENST00000551492 PPP1R27Q86WC6 154 aa16.5■□□□□ 0.23
NPAS3-210ENST00000551492 SRSF9Q13242 221 aaKnown RBP eCLIP16.49■□□□□ 0.23
NPAS3-210ENST00000551492 CHCHD5Q9BSY4 110 aa16.49■□□□□ 0.23
NPAS3-210ENST00000551492 PLEKHA3Q9HB20 300 aa16.49■□□□□ 0.23
NPAS3-210ENST00000551492 LOC389332A0A1B0GUA5 103 aa16.49■□□□□ 0.23
NPAS3-210ENST00000551492 CGB3P0DN86 165 aa16.49■□□□□ 0.23
NPAS3-210ENST00000551492 CGB7P0DN87 165 aa16.49■□□□□ 0.23
NPAS3-210ENST00000551492 ZFP2Q6ZN57 461 aa16.49■□□□□ 0.23
NPAS3-210ENST00000551492 ZNF503Q96F45 646 aa16.49■□□□□ 0.23
NPAS3-210ENST00000551492 C21orf62Q9NYP8 219 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 SETXQ7Z333 2677 aaKnown RBP16.48■□□□□ 0.23
NPAS3-210ENST00000551492 F5H768 121 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 MOSP00540 346 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 LGALS9BQ3B8N2 356 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 LGALS9CQ6DKI2 356 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 TEN1Q86WV5 123 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 PRSS3P2Q8NHM4 247 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 ZNF714Q96N38 554 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 TMEM126AQ9H061 195 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 EDA2RQ9HAV5 297 aa16.48■□□□□ 0.23
NPAS3-210ENST00000551492 ATP5L2Q7Z4Y8 100 aa16.47■□□□□ 0.23
NPAS3-210ENST00000551492 PIMREGQ9BSJ6 248 aa16.47■□□□□ 0.23
NPAS3-210ENST00000551492 H3BVH4 76 aa16.46■□□□□ 0.23
NPAS3-210ENST00000551492 FCGR3BO75015 233 aa16.46■□□□□ 0.23
NPAS3-210ENST00000551492 SAA2P0DJI9 122 aaPredicted RBP16.46■□□□□ 0.23
NPAS3-210ENST00000551492 ZNF414Q96IQ9 312 aa16.46■□□□□ 0.23
NPAS3-210ENST00000551492 KLK5Q9Y337 293 aaPredicted RBP16.46■□□□□ 0.23
NPAS3-210ENST00000551492 PDZD2O15018 2839 aa16.46■□□□□ 0.23
NPAS3-210ENST00000551492 IFI27P40305 119 aaPredicted RBP16.46■□□□□ 0.23
NPAS3-210ENST00000551492 RASL11BQ9BPW5 248 aa16.46■□□□□ 0.23
NPAS3-210ENST00000551492 IFI27L2Q9H2X8 130 aa16.46■□□□□ 0.23
NPAS3-210ENST00000551492 IGHV4-30-2A0A087WSY4 118 aa16.45■□□□□ 0.22
NPAS3-210ENST00000551492 OOSP1A8MZH6 123 aa16.45■□□□□ 0.22
NPAS3-210ENST00000551492 EFNA4P52798 201 aa16.45■□□□□ 0.22
NPAS3-210ENST00000551492 LINC00322Q6ZN03 302 aaPredicted RBP16.45■□□□□ 0.22
NPAS3-210ENST00000551492 J3QKU1 62 aa16.45■□□□□ 0.22
NPAS3-210ENST00000551492 ZC2HC1BQ5TFG8 222 aa16.45■□□□□ 0.22
NPAS3-210ENST00000551492 MORN3Q6PF18 240 aaPredicted RBP16.45■□□□□ 0.22
NPAS3-210ENST00000551492 HIGD1BQ9P298 99 aa16.45■□□□□ 0.22
NPAS3-210ENST00000551492 LOC107984156A0A0G2JMH3 177 aa16.44■□□□□ 0.22
NPAS3-210ENST00000551492 ARL17AQ8IVW1 177 aa16.44■□□□□ 0.22
NPAS3-210ENST00000551492 TIMD4Q96H15 378 aa16.44■□□□□ 0.22
NPAS3-210ENST00000551492 PIGBOS1A0A0B4J2F0 54 aa16.44■□□□□ 0.22
NPAS3-210ENST00000551492 C9JAW5 83 aa16.44■□□□□ 0.22
NPAS3-210ENST00000551492 DLX4Q92988 240 aaPredicted RBP16.44■□□□□ 0.22
NPAS3-210ENST00000551492 HIGD1AQ9Y241 93 aa16.44■□□□□ 0.22
NPAS3-210ENST00000551492 IGHV4-61A0A0C4DH41 118 aa16.43■□□□□ 0.22
NPAS3-210ENST00000551492 CIARTQ8N365 385 aaPredicted RBP16.43■□□□□ 0.22
NPAS3-210ENST00000551492 RPUSD1Q9UJJ7 312 aaKnown RBP16.43■□□□□ 0.22
NPAS3-210ENST00000551492 KLF12Q9Y4X4 402 aa16.43■□□□□ 0.22
NPAS3-210ENST00000551492 NPIPB11E5RHQ5 1161 aa16.43■□□□□ 0.22
NPAS3-210ENST00000551492 IGKV1-16P04430 117 aa16.43■□□□□ 0.22
NPAS3-210ENST00000551492 GTSCR1Q86UQ5 136 aa16.43■□□□□ 0.22
NPAS3-210ENST00000551492 ANKRD29Q8N6D5 301 aa16.43■□□□□ 0.22
NPAS3-210ENST00000551492 TET2Q6N021 2002 aaPredicted RBP16.43■□□□□ 0.22
NPAS3-210ENST00000551492 FAM231DQ6ZW35 169 aa16.42■□□□□ 0.22
NPAS3-210ENST00000551492 MDFICQ9P1T7 246 aa16.42■□□□□ 0.22
NPAS3-210ENST00000551492 TRAV8-2A0A0B4J237 113 aa16.42■□□□□ 0.22
NPAS3-210ENST00000551492 TRAV3A0A0B4J244 114 aa16.42■□□□□ 0.22
NPAS3-210ENST00000551492 TMEM101Q96IK0 257 aa16.42■□□□□ 0.22
NPAS3-210ENST00000551492 RITA1Q96K30 269 aa16.42■□□□□ 0.22
NPAS3-210ENST00000551492 SLC25A33Q9BSK2 321 aa16.42■□□□□ 0.22
NPAS3-210ENST00000551492 OVOL3O00110 214 aa16.41■□□□□ 0.22
NPAS3-210ENST00000551492 MPDU1O75352 247 aa16.41■□□□□ 0.22
NPAS3-210ENST00000551492 TNFRSF6BO95407 300 aa16.41■□□□□ 0.22
NPAS3-210ENST00000551492 MAPKAPK5-AS1Q8N8E1 139 aa16.41■□□□□ 0.22
NPAS3-210ENST00000551492 TRAV8-1A0A0A6YYK1 113 aa16.41■□□□□ 0.22
NPAS3-210ENST00000551492 P0C879 139 aa16.41■□□□□ 0.22
NPAS3-210ENST00000551492 TMEM262E9PQX1 116 aa16.41■□□□□ 0.22
NPAS3-210ENST00000551492 APELAP0DMC3 54 aa16.4■□□□□ 0.22
NPAS3-210ENST00000551492 SIGLEC9Q9Y336 463 aa16.4■□□□□ 0.22
NPAS3-210ENST00000551492 IGHV1-8P0DP01 117 aa16.4■□□□□ 0.22
NPAS3-210ENST00000551492 TMEM155Q4W5P6 130 aa16.4■□□□□ 0.22
NPAS3-210ENST00000551492 HIST1H4GQ99525 98 aa16.4■□□□□ 0.22
NPAS3-210ENST00000551492 TMEM167BQ9NRX6 74 aa16.4■□□□□ 0.22
NPAS3-210ENST00000551492 H2BFWTQ7Z2G1 175 aa16.39■□□□□ 0.21
NPAS3-210ENST00000551492 GNG5P63218 68 aa16.39■□□□□ 0.21
NPAS3-210ENST00000551492 MRPL20Q9BYC9 149 aaKnown RBP16.39■□□□□ 0.21
NPAS3-210ENST00000551492 DUTP33316 252 aaKnown RBP16.38■□□□□ 0.21
NPAS3-210ENST00000551492 KAAG1Q9UBP8 84 aa16.38■□□□□ 0.21
NPAS3-210ENST00000551492 NPFFO15130 113 aa16.38■□□□□ 0.21
NPAS3-210ENST00000551492 DLX6P56179 175 aa16.38■□□□□ 0.21
NPAS3-210ENST00000551492 DUX5Q96PT3 197 aa16.38■□□□□ 0.21
NPAS3-210ENST00000551492 AMMECR1Q9Y4X0 333 aaPredicted RBP16.38■□□□□ 0.21
NPAS3-210ENST00000551492 ENSAO43768 121 aaKnown RBP16.37■□□□□ 0.21
NPAS3-210ENST00000551492 IGHG4P01861 327 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms