RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 ZNF90Q03938 601 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 HIST2H2BEQ16778 126 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.76□□□□□ -1.97
HCFC2-204ENST00000550335 AADACL3Q5VUY0 350 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 RPL13AP3Q6NVV1 102 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 PFN4Q8NHR9 129 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 MCFD2Q8NI22 146 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 HIST1H2BHQ93079 126 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 TSPAN32Q96QS1 320 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 HIST1H2BNQ99877 126 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 HIST1H2BMQ99879 126 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 ZNF471Q9BX82 626 aaPredicted RBP2.76□□□□□ -1.97
HCFC2-204ENST00000550335 CCDC90BQ9GZT6 254 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 IDI2-AS1Q9NZ38 188 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 TMEM56-RWDD3S4R434 201 aa2.76□□□□□ -1.97
HCFC2-204ENST00000550335 MYO9AB2RTY4 2548 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 ABCA4P78363 2273 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 TRAV9-1A0A075B6T8 112 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 A0A096LNT2 108 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 MUC21A0A0G2JKD1 596 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 MUC21A0A140T8X8 626 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 ARRDC5A6NEK1 342 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 ATP6V1G2-DDX39BF2Z307 99 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 KPNA4O00629 521 aaPredicted RBP2.75□□□□□ -1.97
HCFC2-204ENST00000550335 CDC42EP2O14613 210 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 GADD45GO95257 159 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 HAND1O96004 215 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 HIST1H3AP68431 136 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 HES1Q14469 280 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 PABPC1L2AQ5JQF8 200 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 DEFB107AQ8IZN7 70 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 GNPDA2Q8TDQ7 276 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 C10orf105Q8TEF2 133 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 DNAJC30Q96LL9 226 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 C9orf16Q9BUW7 83 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 REG4Q9BYZ8 158 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 FAM107BQ9H098 131 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 RNASE7Q9H1E1 156 aaKnown RBP2.75□□□□□ -1.97
HCFC2-204ENST00000550335 UQCC1Q9NVA1 299 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 IL20Q9NYY1 176 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 BAIAP2Q9UQB8 552 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 FREM1Q5H8C1 2179 aa2.75□□□□□ -1.97
HCFC2-204ENST00000550335 SPG11Q96JI7 2443 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 TRAV27A0A087WT01 109 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 M0R233 179 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 SULT1A3P0DMM9 295 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 SULT1A4P0DMN0 295 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 FXYD6P3P58550 94 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 GLO1Q04760 184 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 KRR1Q13601 381 aaKnown RBP2.74□□□□□ -1.97
HCFC2-204ENST00000550335 SS18Q15532 418 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 LYZL1Q6UWQ5 148 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 LRRC28Q86X40 367 aaPredicted RBP2.74□□□□□ -1.97
HCFC2-204ENST00000550335 DHFR2Q86XF0 187 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 SLC30A7Q8NEW0 376 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 DNAJC9Q8WXX5 260 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 C11orf40Q8WZ69 217 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 Q96M85 177 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 OR2H1Q9GZK4 316 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 CRYBG3Q68DQ2 2970 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 UTP20O75691 2785 aaKnown RBP2.74□□□□□ -1.97
HCFC2-204ENST00000550335 TEX15Q9BXT5 2789 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 OTOGQ6ZRI0 2925 aa2.74□□□□□ -1.97
HCFC2-204ENST00000550335 F8P00451 2351 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 CCDC168Q8NDH2 2452 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 IGKV1D-43A0A0B4J1Z2 117 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 OR7C1O76099 320 aaPredicted RBP2.73□□□□□ -1.97
HCFC2-204ENST00000550335 IGHV3-7P01780 117 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 P0DMU3 169 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 FAM231AP0DMU4 169 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 FAM231CP0DMU5 169 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 HIST1H4AP62805 103 aaKnown RBP2.73□□□□□ -1.97
HCFC2-204ENST00000550335 CCL20P78556 96 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 RPL22L1Q6P5R6 122 aaKnown RBP2.73□□□□□ -1.97
HCFC2-204ENST00000550335 BPIFA4PQ86YQ2 179 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 LRRC18Q8N456 261 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 TEX29Q8N6K0 151 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 GDPD1Q8N9F7 314 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 OR52L1Q8NGH7 329 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 OR10X1Q8NGY0 326 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 DYNLRB1Q9NP97 96 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 TP73-AS1Q9UF72 201 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 NOP16Q9Y3C1 178 aaKnown RBP2.73□□□□□ -1.97
HCFC2-204ENST00000550335 IER3IP1Q9Y5U9 82 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 ANKRD17O75179 2603 aaKnown RBP2.73□□□□□ -1.97
HCFC2-204ENST00000550335 MED13LQ71F56 2210 aa2.73□□□□□ -1.97
HCFC2-204ENST00000550335 TMSB15BA0A087X1C1 80 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 A0A1B0GVG6 124 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 TCRBV3S1A0A5B6 114 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 FABP5P3A8MUU1 101 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 B4DSR2 109 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 H7C2G1 150 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 SLC22A1O15245 554 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 SULT1B1O43704 296 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 IFNGP01579 166 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 IGKV1-5P01602 117 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 APOC1P02654 83 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 MSMBP08118 114 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 SMIM17P0DL12 118 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 EMP1P54849 157 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms