RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PHLDA1Q8WV24 401 aaPredicted RBP16.11■□□□□ 0.17
BRF1-216ENST00000550208 LINC00479Q96M42 142 aa16.11■□□□□ 0.17
BRF1-216ENST00000550208 ATG101Q9BSB4 218 aa16.11■□□□□ 0.17
BRF1-216ENST00000550208 DKK2Q9UBU2 259 aa16.11■□□□□ 0.17
BRF1-216ENST00000550208 TRAV1-1A0A0B4J248 108 aa16.1■□□□□ 0.17
BRF1-216ENST00000550208 TRAV34A0A0B4J273 112 aa16.1■□□□□ 0.17
BRF1-216ENST00000550208 PYGO2Q9BRQ0 406 aa16.1■□□□□ 0.17
BRF1-216ENST00000550208 PEX7O00628 323 aa16.09■□□□□ 0.17
BRF1-216ENST00000550208 ATP5G3P48201 142 aa16.09■□□□□ 0.17
BRF1-216ENST00000550208 CEMP1Q6PRD7 247 aaPredicted RBP16.09■□□□□ 0.17
BRF1-216ENST00000550208 TREM1Q9NP99 234 aa16.09■□□□□ 0.17
BRF1-216ENST00000550208 FLI1Q01543 452 aaPredicted RBP16.08■□□□□ 0.16
BRF1-216ENST00000550208 ALKAL2Q6UX46 152 aa16.08■□□□□ 0.16
BRF1-216ENST00000550208 ZNF493Q6ZR52 646 aa16.08■□□□□ 0.16
BRF1-216ENST00000550208 Q6ZTC4 211 aa16.08■□□□□ 0.16
BRF1-216ENST00000550208 PRNTQ86SH4 94 aa16.08■□□□□ 0.16
BRF1-216ENST00000550208 RNASE8Q8TDE3 154 aaKnown RBP16.08■□□□□ 0.16
BRF1-216ENST00000550208 C16orf74Q96GX8 76 aa16.08■□□□□ 0.16
BRF1-216ENST00000550208 ARL2-SNX15V9GYD0 113 aa16.08■□□□□ 0.16
BRF1-216ENST00000550208 STARD9Q9P2P6 4700 aa16.08■□□□□ 0.16
BRF1-216ENST00000550208 TMEM75Q8N9X5 138 aa16.07■□□□□ 0.16
BRF1-216ENST00000550208 TMEM263Q8WUH6 116 aaKnown RBP16.07■□□□□ 0.16
BRF1-216ENST00000550208 HIST1H2BAQ96A08 127 aa16.07■□□□□ 0.16
BRF1-216ENST00000550208 C8orf49Q96NF6 230 aa16.07■□□□□ 0.16
BRF1-216ENST00000550208 LINC00467Q9BRT7 94 aa16.07■□□□□ 0.16
BRF1-216ENST00000550208 F6UZH7 168 aa16.06■□□□□ 0.16
BRF1-216ENST00000550208 RGS13O14921 159 aa16.06■□□□□ 0.16
BRF1-216ENST00000550208 PPT1P50897 306 aa16.06■□□□□ 0.16
BRF1-216ENST00000550208 Q6AWC8 147 aa16.06■□□□□ 0.16
BRF1-216ENST00000550208 EIF4E3Q8N5X7 224 aaKnown RBP16.06■□□□□ 0.16
BRF1-216ENST00000550208 CSMD3Q7Z407 3707 aa16.06■□□□□ 0.16
BRF1-216ENST00000550208 IGHV1OR15-1A0A075B7D0 117 aa16.05■□□□□ 0.16
BRF1-216ENST00000550208 NUPR2A6NF83 97 aa16.05■□□□□ 0.16
BRF1-216ENST00000550208 NDFIP1Q9BT67 221 aa16.05■□□□□ 0.16
BRF1-216ENST00000550208 GNG13Q9P2W3 67 aa16.05■□□□□ 0.16
BRF1-216ENST00000550208 TP53TG3Q9ULZ0 132 aa16.05■□□□□ 0.16
BRF1-216ENST00000550208 FBLL1A6NHQ2 334 aaKnown RBP16.04■□□□□ 0.16
BRF1-216ENST00000550208 CBY3A6NI87 242 aa16.04■□□□□ 0.16
BRF1-216ENST00000550208 TEX46H3BTG2 121 aa16.04■□□□□ 0.16
BRF1-216ENST00000550208 ANXA2RQ3ZCQ2 193 aa16.04■□□□□ 0.16
BRF1-216ENST00000550208 MUC21Q5SSG8 566 aa16.04■□□□□ 0.16
BRF1-216ENST00000550208 NOP10Q9NPE3 64 aaKnown RBP16.04■□□□□ 0.16
BRF1-216ENST00000550208 TIMM8BQ9Y5J9 83 aaPredicted RBP16.04■□□□□ 0.16
BRF1-216ENST00000550208 TEX48A0A1B0GUV7 120 aa16.03■□□□□ 0.16
BRF1-216ENST00000550208 LYRM9A8MSI8 78 aa16.03■□□□□ 0.16
BRF1-216ENST00000550208 ZNF80P51504 273 aaPredicted RBP16.03■□□□□ 0.16
BRF1-216ENST00000550208 TCEAL7Q9BRU2 100 aa16.03■□□□□ 0.16
BRF1-216ENST00000550208 TRAV10A0A0B4J240 114 aa16.02■□□□□ 0.16
BRF1-216ENST00000550208 C11orf94C9JXX5 98 aa16.02■□□□□ 0.16
BRF1-216ENST00000550208 DAD1P61803 113 aa16.02■□□□□ 0.16
BRF1-216ENST00000550208 SAPCD1Q5SSQ6 148 aa16.02■□□□□ 0.16
BRF1-216ENST00000550208 MANBALQ9NQG1 85 aa16.02■□□□□ 0.16
BRF1-216ENST00000550208 GSN-AS1Q9NRJ2 163 aa16.02■□□□□ 0.16
BRF1-216ENST00000550208 KLK5Q9Y337 293 aaPredicted RBP16.02■□□□□ 0.16
BRF1-216ENST00000550208 KLF12Q9Y4X4 402 aa16.02■□□□□ 0.16
BRF1-216ENST00000550208 TRAV21A0A0B4J279 112 aa16.01■□□□□ 0.15
BRF1-216ENST00000550208 GCGP01275 180 aa16.01■□□□□ 0.15
BRF1-216ENST00000550208 DEFB130BP0DP73 79 aa16.01■□□□□ 0.15
BRF1-216ENST00000550208 DEFB130AP0DP74 79 aa16.01■□□□□ 0.15
BRF1-216ENST00000550208 C11orf72Q8NBR9 251 aa16.01■□□□□ 0.15
BRF1-216ENST00000550208 DYNC2H1Q8NCM8 4307 aaKnown RBP16■□□□□ 0.15
BRF1-216ENST00000550208 DEFB131BA0A096LNP1 70 aa16■□□□□ 0.15
BRF1-216ENST00000550208 SCO2A0A1W2PP80 73 aa16■□□□□ 0.15
BRF1-216ENST00000550208 SNURFLB1AK76 121 aa16■□□□□ 0.15
BRF1-216ENST00000550208 AKR1C3P42330 323 aa16■□□□□ 0.15
BRF1-216ENST00000550208 SMUG1Q53HV7 270 aa16■□□□□ 0.15
BRF1-216ENST00000550208 Q86TA4 180 aa16■□□□□ 0.15
BRF1-216ENST00000550208 NAGKQ9UJ70 344 aa16■□□□□ 0.15
BRF1-216ENST00000550208 TENM2Q9NT68 2774 aa16■□□□□ 0.15
BRF1-216ENST00000550208 UBE2G1P62253 170 aa15.99■□□□□ 0.15
BRF1-216ENST00000550208 BLOC1S1P78537 153 aa15.99■□□□□ 0.15
BRF1-216ENST00000550208 TMEM183BQ1AE95 376 aa15.99■□□□□ 0.15
BRF1-216ENST00000550208 FAM159AQ6UWV7 190 aa15.99■□□□□ 0.15
BRF1-216ENST00000550208 ZNF680Q8NEM1 530 aa15.99■□□□□ 0.15
BRF1-216ENST00000550208 C2CD4CQ8TF44 421 aa15.99■□□□□ 0.15
BRF1-216ENST00000550208 FMC1Q96HJ9 113 aa15.99■□□□□ 0.15
BRF1-216ENST00000550208 GNRH2O43555 120 aa15.98■□□□□ 0.15
BRF1-216ENST00000550208 TRBV6-1A0A0K0K1D8 114 aa15.97■□□□□ 0.15
BRF1-216ENST00000550208 IGLL5B9A064 214 aa15.97■□□□□ 0.15
BRF1-216ENST00000550208 HTN3P15516 51 aa15.97■□□□□ 0.15
BRF1-216ENST00000550208 DAZ2Q13117 558 aaKnown RBP15.97■□□□□ 0.15
BRF1-216ENST00000550208 TMEM183AQ8IXX5 376 aa15.97■□□□□ 0.15
BRF1-216ENST00000550208 MDFICQ9P1T7 246 aa15.97■□□□□ 0.15
BRF1-216ENST00000550208 C11orf21Q9P2W6 132 aa15.97■□□□□ 0.15
BRF1-216ENST00000550208 ZFP30Q9Y2G7 519 aa15.97■□□□□ 0.15
BRF1-216ENST00000550208 TCL1AP56279 114 aa15.96■□□□□ 0.15
BRF1-216ENST00000550208 TDRG1Q3Y452 100 aa15.96■□□□□ 0.15
BRF1-216ENST00000550208 IBA57Q5T440 356 aaKnown RBP15.96■□□□□ 0.15
BRF1-216ENST00000550208 LINC00612Q8N6U2 182 aa15.96■□□□□ 0.15
BRF1-216ENST00000550208 PLECQ15149 4684 aaKnown RBP15.96■□□□□ 0.15
BRF1-216ENST00000550208 GAGE12BA1L429 117 aa15.95■□□□□ 0.14
BRF1-216ENST00000550208 GAGE7O76087 117 aa15.95■□□□□ 0.14
BRF1-216ENST00000550208 IFNA1P01562 189 aa15.95■□□□□ 0.14
BRF1-216ENST00000550208 S100A9P06702 114 aaKnown RBP15.95■□□□□ 0.14
BRF1-216ENST00000550208 PFN1P07737 140 aaKnown RBP15.95■□□□□ 0.14
BRF1-216ENST00000550208 GAGE12FP0CL80 117 aa15.95■□□□□ 0.14
BRF1-216ENST00000550208 GAGE12GP0CL81 117 aa15.95■□□□□ 0.14
BRF1-216ENST00000550208 GAGE12IP0CL82 117 aa15.95■□□□□ 0.14
BRF1-216ENST00000550208 TXNDC17Q9BRA2 123 aa15.95■□□□□ 0.14
BRF1-216ENST00000550208 LTAP01374 205 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms