RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 BPESC1Q9GZL8 116 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 DKK2Q9UBU2 259 aa8.64□□□□□ -1.03
LINC00661-204ENST00000549354 USP24Q9UPU5 2620 aa8.63□□□□□ -1.03
LINC00661-204ENST00000549354 HAX1O00165 279 aa8.63□□□□□ -1.03
LINC00661-204ENST00000549354 HIST1H1AQ02539 215 aaPredicted RBP8.63□□□□□ -1.03
LINC00661-204ENST00000549354 SAPCD1Q5SSQ6 148 aa8.63□□□□□ -1.03
LINC00661-204ENST00000549354 C1RLQ9NZP8 487 aa8.63□□□□□ -1.03
LINC00661-204ENST00000549354 ZNF492Q9P255 531 aa8.63□□□□□ -1.03
LINC00661-204ENST00000549354 ANKRD17O75179 2603 aaKnown RBP8.63□□□□□ -1.03
LINC00661-204ENST00000549354 K7EQM0 130 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 NDUFS8O00217 210 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 IGKV3-20P01619 116 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 CLEC3BP05452 202 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 SIGLEC15Q6ZMC9 328 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 Q8N6K4 173 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 AJUBAQ96IF1 538 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 K7EIM0 57 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 ZNF80P51504 273 aaPredicted RBP8.62□□□□□ -1.03
LINC00661-204ENST00000549354 LINC01545Q5VT33 79 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 CCDC144NLQ6NUI1 221 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 ZNF491Q8N8L2 437 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 TEX15Q9BXT5 2789 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 A0A096LNJ9 63 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 I3L2K1 104 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 COX8AP10176 69 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 UBE2E1P51965 193 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 PSG3Q16557 428 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 CLEC2AQ6UVW9 174 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 JMJD8Q96S16 334 aa8.62□□□□□ -1.03
LINC00661-204ENST00000549354 SH2D1AO60880 128 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 NPYP01303 97 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 HTN1P15515 57 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 CT83Q5H943 113 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 PIP4P2Q8N4L2 257 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 CCL19Q99731 98 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 CHD6Q8TD26 2715 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 PRB1P04280 392 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 GCSHP23434 173 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 EMP1P54849 157 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 C10orf105Q8TEF2 133 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 GFRA4Q9GZZ7 299 aa8.61□□□□□ -1.03
LINC00661-204ENST00000549354 PEF1Q9UBV8 284 aaKnown RBP8.61□□□□□ -1.03
LINC00661-204ENST00000549354 NBR2O15453 112 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 CD5LO43866 347 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 MRPL51Q4U2R6 128 aaKnown RBP8.6□□□□□ -1.03
LINC00661-204ENST00000549354 DOPEY1Q5JWR5 2465 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 ZNF414Q96IQ9 312 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 NPIPB6E9PJ23 425 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 K7ERJ3 54 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 EGR2P11161 476 aaPredicted RBP8.6□□□□□ -1.03
LINC00661-204ENST00000549354 SRSF1Q07955 248 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC00661-204ENST00000549354 KIR3DS1Q14943 382 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 SHANK2-AS3Q9BTD1 123 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 C21orf62Q9NYP8 219 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 PAX8Q06710 450 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 ORMDL3Q8N138 153 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 TMEM160Q9NX00 188 aa8.6□□□□□ -1.03
LINC00661-204ENST00000549354 RPL24P83731 157 aaKnown RBP8.59□□□□□ -1.03
LINC00661-204ENST00000549354 C15orf32Q32M92 178 aa8.59□□□□□ -1.03
LINC00661-204ENST00000549354 PIMREGQ9BSJ6 248 aa8.59□□□□□ -1.03
LINC00661-204ENST00000549354 MXRA5Q9NR99 2828 aa8.59□□□□□ -1.03
LINC00661-204ENST00000549354 M0R381 172 aa8.59□□□□□ -1.03
LINC00661-204ENST00000549354 IGF1P05019 195 aa8.59□□□□□ -1.03
LINC00661-204ENST00000549354 GTSCR1Q86UQ5 136 aa8.59□□□□□ -1.03
LINC00661-204ENST00000549354 A1L4Q6 167 aa8.59□□□□□ -1.04
LINC00661-204ENST00000549354 IL17RELQ6ZVW7 336 aa8.59□□□□□ -1.04
LINC00661-204ENST00000549354 NEGR1Q7Z3B1 354 aa8.59□□□□□ -1.04
LINC00661-204ENST00000549354 MAPK1IP1LQ8NDC0 245 aa8.59□□□□□ -1.04
LINC00661-204ENST00000549354 ARPC1AQ92747 370 aa8.59□□□□□ -1.04
LINC00661-204ENST00000549354 IFI27L1Q96BM0 104 aa8.59□□□□□ -1.04
LINC00661-204ENST00000549354 NBEAL2Q6ZNJ1 2754 aa8.59□□□□□ -1.04
LINC00661-204ENST00000549354 C5orf64Q2M2E5 130 aa8.58□□□□□ -1.04
LINC00661-204ENST00000549354 FAM104BQ5XKR9 115 aa8.58□□□□□ -1.04
LINC00661-204ENST00000549354 MS4A6AQ9H2W1 248 aa8.58□□□□□ -1.04
LINC00661-204ENST00000549354 F6UB75 175 aa8.58□□□□□ -1.04
LINC00661-204ENST00000549354 SMIM12Q96EX1 92 aa8.58□□□□□ -1.04
LINC00661-204ENST00000549354 IGKV2D-26A0A0A0MRZ7 120 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 A0A0G2JLM5 398 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 K7ERU9 68 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 H3BRN7 92 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 TGFAP01135 160 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 LEPP41159 167 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 MFAP4P55083 255 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 HBDP02042 147 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 ZNF562Q6V9R5 426 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 FER1L6-AS1Q8NA97 138 aa8.57□□□□□ -1.04
LINC00661-204ENST00000549354 IGHV4-61A0A0C4DH41 118 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 FGF6P10767 208 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 DSCR9P59020 149 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 PLP1P60201 277 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 KLK9Q2XQG4 91 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 KLK9Q9UKQ9 250 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 TRGV3P03979 118 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 OR2K2Q8NGT1 345 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 FANCD2OSQ96PS1 177 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 FOXC2Q99958 501 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 SPCS1Q9Y6A9 102 aa8.56□□□□□ -1.04
LINC00661-204ENST00000549354 CENPVL3A0A0U1RRI6 287 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 A6NDN8 102 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 SMAD7O15105 426 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms