RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 FAM3BP58499 235 aaPredicted RBP11.53□□□□□ -0.56
SSH1-208ENST00000548522 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
SSH1-208ENST00000548522 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
SSH1-208ENST00000548522 MRPL32Q9BYC8 188 aaKnown RBP11.53□□□□□ -0.56
SSH1-208ENST00000548522 TMEM242Q9NWH2 141 aa11.53□□□□□ -0.56
SSH1-208ENST00000548522 TRAV12-2A0A075B6T6 113 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 TRAV8-2A0A0B4J237 113 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 F5H768 121 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 F6UZH7 168 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 H3BQ15 152 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 INSP01308 110 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 LINC00869P0C866 280 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 FGF8P55075 233 aaPredicted RBP11.52□□□□□ -0.57
SSH1-208ENST00000548522 MIC13Q5XKP0 118 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 TRGV9Q99603 122 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 TMA7Q9Y2S6 64 aaKnown RBP11.52□□□□□ -0.57
SSH1-208ENST00000548522 LINC00588Q9Y4M8 146 aa11.52□□□□□ -0.57
SSH1-208ENST00000548522 LYRM9A8MSI8 78 aa11.51□□□□□ -0.57
SSH1-208ENST00000548522 M0R036 132 aa11.51□□□□□ -0.57
SSH1-208ENST00000548522 OR5G3P0C626 314 aa11.51□□□□□ -0.57
SSH1-208ENST00000548522 GATA2P23769 480 aaPredicted RBP11.51□□□□□ -0.57
SSH1-208ENST00000548522 CYP2G1PQ6ZSU1 146 aa11.51□□□□□ -0.57
SSH1-208ENST00000548522 KRTAP1-5Q9BYS1 174 aa11.51□□□□□ -0.57
SSH1-208ENST00000548522 FAT1Q14517 4588 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 ZNF98A6NK75 572 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 FABP1P07148 127 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 GALR1P47211 349 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 MEOX2P50222 304 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 TAS2R45P59539 299 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 PQLC2Q6ZP29 291 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 CBLN2Q8IUK8 224 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.5□□□□□ -0.57
SSH1-208ENST00000548522 OR1L4Q8NGR5 311 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 PFDN5Q99471 154 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 SLC25A39Q9BZJ4 359 aaPredicted RBP11.5□□□□□ -0.57
SSH1-208ENST00000548522 RPS10P5Q9NQ39 176 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 FUT9Q9Y231 359 aa11.5□□□□□ -0.57
SSH1-208ENST00000548522 MT-ND4LP03901 98 aa11.49□□□□□ -0.57
SSH1-208ENST00000548522 SAMD13Q5VXD3 122 aa11.49□□□□□ -0.57
SSH1-208ENST00000548522 SPATA12Q7Z6I5 190 aa11.49□□□□□ -0.57
SSH1-208ENST00000548522 Q8N1X5 172 aa11.49□□□□□ -0.57
SSH1-208ENST00000548522 CTDSP1Q9GZU7 261 aa11.49□□□□□ -0.57
SSH1-208ENST00000548522 NAT8Q9UHE5 227 aa11.49□□□□□ -0.57
SSH1-208ENST00000548522 COLCA2A8K830 154 aa11.48□□□□□ -0.57
SSH1-208ENST00000548522 ORM2P19652 201 aa11.48□□□□□ -0.57
SSH1-208ENST00000548522 FLI1Q01543 452 aaPredicted RBP11.48□□□□□ -0.57
SSH1-208ENST00000548522 SDF2L1Q9HCN8 221 aa11.48□□□□□ -0.57
SSH1-208ENST00000548522 ARL14EPLP0DKL9 152 aa11.47□□□□□ -0.57
SSH1-208ENST00000548522 GCHFRP30047 84 aa11.47□□□□□ -0.57
SSH1-208ENST00000548522 TSPOP30536 169 aa11.47□□□□□ -0.57
SSH1-208ENST00000548522 PLP1P60201 277 aa11.47□□□□□ -0.57
SSH1-208ENST00000548522 KRTAP10-2P60368 255 aa11.47□□□□□ -0.57
SSH1-208ENST00000548522 GCSAMLQ5JQS6 135 aa11.47□□□□□ -0.57
SSH1-208ENST00000548522 C11orf52Q96A22 123 aa11.47□□□□□ -0.57
SSH1-208ENST00000548522 SCRT2Q9NQ03 307 aa11.47□□□□□ -0.57
SSH1-208ENST00000548522 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 PAGE4O60829 102 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 DUSP14O95147 198 aaKnown RBP11.46□□□□□ -0.57
SSH1-208ENST00000548522 ATP5G1P05496 136 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 ATP5G3P48201 142 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 CCL18P55774 89 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 ZNF738Q8NE65 137 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 OR1B1Q8NGR6 318 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 YPEL4Q96NS1 127 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 SMIM7Q9BQ49 75 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 TCEAL7Q9BRU2 100 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 TMPRSS5Q9H3S3 457 aa11.46□□□□□ -0.57
SSH1-208ENST00000548522 LOC105371267A0A1B0GV96 52 aa11.45□□□□□ -0.58
SSH1-208ENST00000548522 HTN1P15515 57 aa11.45□□□□□ -0.58
SSH1-208ENST00000548522 HIST1H1AQ02539 215 aaPredicted RBP11.45□□□□□ -0.58
SSH1-208ENST00000548522 TMEM241Q24JQ0 296 aa11.45□□□□□ -0.58
SSH1-208ENST00000548522 UHRF2Q96PU4 802 aa11.45□□□□□ -0.58
SSH1-208ENST00000548522 PARLQ9H300 379 aa11.45□□□□□ -0.58
SSH1-208ENST00000548522 DNAJC4Q9NNZ3 241 aa11.45□□□□□ -0.58
SSH1-208ENST00000548522 CBY3A6NI87 242 aa11.44□□□□□ -0.58
SSH1-208ENST00000548522 H3BRN7 92 aa11.44□□□□□ -0.58
SSH1-208ENST00000548522 HIST1H2BAQ96A08 127 aa11.44□□□□□ -0.58
SSH1-208ENST00000548522 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
SSH1-208ENST00000548522 LINC01587Q99440 93 aa11.44□□□□□ -0.58
SSH1-208ENST00000548522 LY96Q9Y6Y9 160 aa11.44□□□□□ -0.58
SSH1-208ENST00000548522 A0A1W2PRE2 83 aa11.43□□□□□ -0.58
SSH1-208ENST00000548522 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
SSH1-208ENST00000548522 KIR3DS1Q14943 382 aa11.43□□□□□ -0.58
SSH1-208ENST00000548522 ANAPC16Q96DE5 110 aa11.43□□□□□ -0.58
SSH1-208ENST00000548522 NOP10Q9NPE3 64 aaKnown RBP11.43□□□□□ -0.58
SSH1-208ENST00000548522 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
SSH1-208ENST00000548522 CEBPGP53567 150 aa11.42□□□□□ -0.58
SSH1-208ENST00000548522 TAS2R60P59551 318 aa11.42□□□□□ -0.58
SSH1-208ENST00000548522 IQCF2Q8IXL9 164 aa11.42□□□□□ -0.58
SSH1-208ENST00000548522 OR8A1Q8NGG7 326 aa11.42□□□□□ -0.58
SSH1-208ENST00000548522 RNASE8Q8TDE3 154 aaKnown RBP11.42□□□□□ -0.58
SSH1-208ENST00000548522 GPR82Q96P67 336 aa11.42□□□□□ -0.58
SSH1-208ENST00000548522 SHANK2-AS3Q9BTD1 123 aa11.42□□□□□ -0.58
SSH1-208ENST00000548522 Q9H8V8 135 aa11.42□□□□□ -0.58
SSH1-208ENST00000548522 TRAV26-1A0A087WT03 109 aa11.41□□□□□ -0.58
SSH1-208ENST00000548522 C9JCJ5 164 aa11.41□□□□□ -0.58
SSH1-208ENST00000548522 COX7A2P2O60397 106 aa11.41□□□□□ -0.58
SSH1-208ENST00000548522 MIR17HGQ75NE6 70 aa11.41□□□□□ -0.58
SSH1-208ENST00000548522 S100A7AQ86SG5 101 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms