RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 TRGV1A0A0A0MS02 117 aa10.97□□□□□ -0.65
RAPGEF3-217ENST00000548434 C16orf90A8MZG2 172 aa10.97□□□□□ -0.65
RAPGEF3-217ENST00000548434 TMEM78Q5T7P6 136 aa10.97□□□□□ -0.65
RAPGEF3-217ENST00000548434 Q6AWC8 147 aa10.97□□□□□ -0.65
RAPGEF3-217ENST00000548434 Q8TAT8 98 aa10.97□□□□□ -0.65
RAPGEF3-217ENST00000548434 ATP5SQ99766 215 aa10.97□□□□□ -0.65
RAPGEF3-217ENST00000548434 CRYBA4P53673 196 aa10.96□□□□□ -0.65
RAPGEF3-217ENST00000548434 IQCF2Q8IXL9 164 aa10.96□□□□□ -0.65
RAPGEF3-217ENST00000548434 PTTG2Q9NZH5 202 aa10.96□□□□□ -0.65
RAPGEF3-217ENST00000548434 MDFICQ9P1T7 246 aa10.96□□□□□ -0.65
RAPGEF3-217ENST00000548434 LENEPQ9Y5L5 61 aa10.96□□□□□ -0.65
RAPGEF3-217ENST00000548434 FAT1Q14517 4588 aa10.96□□□□□ -0.66
RAPGEF3-217ENST00000548434 TRGV2A0A075B6R0 118 aa10.95□□□□□ -0.66
RAPGEF3-217ENST00000548434 DIRC3C9JPN6 131 aa10.95□□□□□ -0.66
RAPGEF3-217ENST00000548434 RANP62826 216 aaKnown RBP10.95□□□□□ -0.66
RAPGEF3-217ENST00000548434 TTC32Q5I0X7 151 aa10.95□□□□□ -0.66
RAPGEF3-217ENST00000548434 TVP23CQ96ET8 276 aa10.95□□□□□ -0.66
RAPGEF3-217ENST00000548434 KCNIP2Q9NS61 270 aa10.95□□□□□ -0.66
RAPGEF3-217ENST00000548434 MRPL16Q9NX20 251 aaKnown RBP10.95□□□□□ -0.66
RAPGEF3-217ENST00000548434 EIF3GO75821 320 aaKnown RBP eCLIP10.94□□□□□ -0.66
RAPGEF3-217ENST00000548434 TDRG1Q3Y452 100 aa10.94□□□□□ -0.66
RAPGEF3-217ENST00000548434 FFAR4Q5NUL3 377 aa10.94□□□□□ -0.66
RAPGEF3-217ENST00000548434 SPATA12Q7Z6I5 190 aa10.94□□□□□ -0.66
RAPGEF3-217ENST00000548434 TMED6Q8WW62 240 aa10.94□□□□□ -0.66
RAPGEF3-217ENST00000548434 RASL10AQ92737 203 aa10.94□□□□□ -0.66
RAPGEF3-217ENST00000548434 RGS13O14921 159 aa10.93□□□□□ -0.66
RAPGEF3-217ENST00000548434 RPL12P30050 165 aaKnown RBP10.93□□□□□ -0.66
RAPGEF3-217ENST00000548434 LINC00315P59091 139 aa10.93□□□□□ -0.66
RAPGEF3-217ENST00000548434 LYPD5Q6UWN5 251 aa10.93□□□□□ -0.66
RAPGEF3-217ENST00000548434 ARL6IP6Q8N6S5 226 aa10.93□□□□□ -0.66
RAPGEF3-217ENST00000548434 PRO0255Q9UI72 69 aa10.93□□□□□ -0.66
RAPGEF3-217ENST00000548434 HHLA3Q9XRX5 114 aa10.93□□□□□ -0.66
RAPGEF3-217ENST00000548434 VPS13BQ7Z7G8 4022 aa10.93□□□□□ -0.66
RAPGEF3-217ENST00000548434 C17orf112F2Z3M2 114 aa10.92□□□□□ -0.66
RAPGEF3-217ENST00000548434 PAX4O43316 350 aa10.92□□□□□ -0.66
RAPGEF3-217ENST00000548434 OR7C2O60412 319 aa10.92□□□□□ -0.66
RAPGEF3-217ENST00000548434 OR10G4Q8NGN3 311 aa10.92□□□□□ -0.66
RAPGEF3-217ENST00000548434 MBD2Q9UBB5 411 aa10.92□□□□□ -0.66
RAPGEF3-217ENST00000548434 SIVA1O15304 175 aa10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 UBE2L3P68036 154 aaKnown RBP10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 MUC21Q5SSG8 566 aa10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 SUN5Q8TC36 379 aa10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 ZNF479Q96JC4 524 aa10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 SMIM3Q9BZL3 60 aa10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 OTORQ9NRC9 128 aa10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 TNFRSF18Q9Y5U5 241 aa10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 ICOSQ9Y6W8 199 aa10.91□□□□□ -0.66
RAPGEF3-217ENST00000548434 NXPH4O95158 308 aa10.9□□□□□ -0.66
RAPGEF3-217ENST00000548434 ZNF415Q09FC8 603 aa10.9□□□□□ -0.66
RAPGEF3-217ENST00000548434 SLAQ13239 276 aa10.9□□□□□ -0.66
RAPGEF3-217ENST00000548434 KHDC3LQ587J8 217 aa10.9□□□□□ -0.66
RAPGEF3-217ENST00000548434 C8orf49Q96NF6 230 aa10.9□□□□□ -0.66
RAPGEF3-217ENST00000548434 DNAH8Q96JB1 4490 aa10.89□□□□□ -0.67
RAPGEF3-217ENST00000548434 PGPA6NDG6 321 aa10.89□□□□□ -0.67
RAPGEF3-217ENST00000548434 SFTA3P0C7M3 94 aa10.89□□□□□ -0.67
RAPGEF3-217ENST00000548434 CSN1S1P47710 185 aa10.89□□□□□ -0.67
RAPGEF3-217ENST00000548434 Q8N1X5 172 aa10.89□□□□□ -0.67
RAPGEF3-217ENST00000548434 SPXQ9BT56 116 aa10.89□□□□□ -0.67
RAPGEF3-217ENST00000548434 IGHV3-16A0A0C4DH30 117 aa10.88□□□□□ -0.67
RAPGEF3-217ENST00000548434 K7EQD1 137 aa10.88□□□□□ -0.67
RAPGEF3-217ENST00000548434 GNRH2O43555 120 aa10.88□□□□□ -0.67
RAPGEF3-217ENST00000548434 RAB2AP61019 212 aa10.88□□□□□ -0.67
RAPGEF3-217ENST00000548434 TMEM183BQ1AE95 376 aa10.88□□□□□ -0.67
RAPGEF3-217ENST00000548434 TMEM183AQ8IXX5 376 aa10.88□□□□□ -0.67
RAPGEF3-217ENST00000548434 SSNA1O43805 119 aa10.87□□□□□ -0.67
RAPGEF3-217ENST00000548434 IFNA5P01569 189 aa10.87□□□□□ -0.67
RAPGEF3-217ENST00000548434 TAS2R45P59539 299 aa10.87□□□□□ -0.67
RAPGEF3-217ENST00000548434 MRPL23Q16540 153 aaKnown RBP10.87□□□□□ -0.67
RAPGEF3-217ENST00000548434 PQLC2Q6ZP29 291 aa10.87□□□□□ -0.67
RAPGEF3-217ENST00000548434 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
RAPGEF3-217ENST00000548434 SCGB1C1Q8TD33 95 aa10.87□□□□□ -0.67
RAPGEF3-217ENST00000548434 ARPC5LQ9BPX5 153 aa10.87□□□□□ -0.67
RAPGEF3-217ENST00000548434 C11orf21Q9P2W6 132 aa10.87□□□□□ -0.67
RAPGEF3-217ENST00000548434 TRAV8-1A0A0A6YYK1 113 aa10.86□□□□□ -0.67
RAPGEF3-217ENST00000548434 PET100P0DJ07 73 aa10.86□□□□□ -0.67
RAPGEF3-217ENST00000548434 NEGR1Q7Z3B1 354 aa10.86□□□□□ -0.67
RAPGEF3-217ENST00000548434 OR2G3Q8NGZ4 309 aa10.86□□□□□ -0.67
RAPGEF3-217ENST00000548434 TRAV4A0A0B4J268 109 aa10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 IGLV2-11P01706 119 aa10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 STAG3L2P0CL84 134 aa10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 STAG3L3P0CL85 134 aa10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 ZNF80P51504 273 aaPredicted RBP10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 ACOT6Q3I5F7 207 aaPredicted RBP10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 GOLT1AQ6ZVE7 132 aa10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 HYLS1Q96M11 299 aa10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 ALG5Q9Y673 324 aa10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 HERC1Q15751 4861 aa10.85□□□□□ -0.67
RAPGEF3-217ENST00000548434 TRGV11A0A075B6L2 103 aa10.84□□□□□ -0.67
RAPGEF3-217ENST00000548434 HMGB3O15347 200 aaKnown RBP10.84□□□□□ -0.67
RAPGEF3-217ENST00000548434 TYMSP04818 313 aa10.84□□□□□ -0.67
RAPGEF3-217ENST00000548434 DNAH10OSP0CZ25 163 aa10.84□□□□□ -0.67
RAPGEF3-217ENST00000548434 FUSP35637 526 aaKnown RBP eCLIP10.84□□□□□ -0.67
RAPGEF3-217ENST00000548434 GNG5P63218 68 aa10.84□□□□□ -0.67
RAPGEF3-217ENST00000548434 Q5BKY6 102 aa10.84□□□□□ -0.67
RAPGEF3-217ENST00000548434 FAM159AQ6UWV7 190 aa10.84□□□□□ -0.67
RAPGEF3-217ENST00000548434 WFDC10BQ8IUB3 73 aa10.84□□□□□ -0.67
RAPGEF3-217ENST00000548434 TRGV4A0A0C4DH28 118 aa10.83□□□□□ -0.68
RAPGEF3-217ENST00000548434 LOC100131303A0A0U1RQF7 123 aa10.83□□□□□ -0.68
RAPGEF3-217ENST00000548434 M0R2P5 195 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms