RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 FAM122CQ6P4D5 195 aa8.13□□□□□ -1.11
TRAFD1-205ENST00000548277 ZNF680Q8NEM1 530 aa8.13□□□□□ -1.11
TRAFD1-205ENST00000548277 PPP1R1CQ8WVI7 109 aa8.13□□□□□ -1.11
TRAFD1-205ENST00000548277 WDR61Q9GZS3 305 aaKnown RBP8.13□□□□□ -1.11
TRAFD1-205ENST00000548277 OR51M1Q9H341 326 aa8.13□□□□□ -1.11
TRAFD1-205ENST00000548277 AAMDCQ9H7C9 122 aa8.13□□□□□ -1.11
TRAFD1-205ENST00000548277 HHLA3Q9XRX5 114 aa8.13□□□□□ -1.11
TRAFD1-205ENST00000548277 FAT1Q14517 4588 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 KLLNB2CW77 178 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 SSNA1O43805 119 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 OR10J4P0C629 311 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 CRYBA4P53673 196 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 CDPF1Q6NVV7 123 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 C9orf47Q6ZRZ4 202 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 FAM19A4Q96LR4 140 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 VGLL1Q99990 258 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 MARVELD1Q9BSK0 173 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 PAXXQ9BUH6 204 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 PRO0255Q9UI72 69 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 LY96Q9Y6Y9 160 aa8.12□□□□□ -1.11
TRAFD1-205ENST00000548277 TRAV9-2A0A087WT02 112 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 IGKV2-40A0A087WW87 121 aaPredicted RBP8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 TRGV4A0A0C4DH28 118 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 C17orf112F2Z3M2 114 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 IGKV2D-40P01614 121 aaPredicted RBP8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 SFTA3P0C7M3 94 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 GCSHP23434 173 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 TCL1AP56279 114 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 FHL2Q14192 279 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 MRPL23Q16540 153 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 ANXA2RQ3ZCQ2 193 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 TMEM78Q5T7P6 136 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 PRR9Q5T870 116 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 NEGR1Q7Z3B1 354 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 NFE4Q86UQ8 179 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 WFDC10BQ8IUB3 73 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 FXYD5Q96DB9 178 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 ST6GAL2Q96JF0 529 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 ARPC5LQ9BPX5 153 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 MRPL32Q9BYC8 188 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 KCNIP2Q9NS61 270 aa8.11□□□□□ -1.11
TRAFD1-205ENST00000548277 OR7C2O60412 319 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 MPC2O95563 127 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 CRISP2P16562 243 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 DEFA1P59665 94 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 DEFA3P59666 94 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 ZNF415Q09FC8 603 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 MUC21Q5SSG8 566 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 PHYHIPLQ96FC7 376 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 C18orf15Q96N68 181 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 ATP5SQ99766 215 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 SMIM3Q9BZL3 60 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 MSRB1Q9NZV6 116 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 HSPB11Q9Y547 144 aa8.1□□□□□ -1.11
TRAFD1-205ENST00000548277 IGHV1OR15-1A0A075B7D0 117 aa8.09□□□□□ -1.11
TRAFD1-205ENST00000548277 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
TRAFD1-205ENST00000548277 RPL12P30050 165 aaKnown RBP8.09□□□□□ -1.11
TRAFD1-205ENST00000548277 RANP62826 216 aaKnown RBP8.09□□□□□ -1.11
TRAFD1-205ENST00000548277 FFAR4Q5NUL3 377 aa8.09□□□□□ -1.11
TRAFD1-205ENST00000548277 ZFAND2AQ8N6M9 145 aa8.09□□□□□ -1.11
TRAFD1-205ENST00000548277 SCGB1C1Q8TD33 95 aa8.09□□□□□ -1.11
TRAFD1-205ENST00000548277 LINC00467Q9BRT7 94 aa8.09□□□□□ -1.11
TRAFD1-205ENST00000548277 ZNF492Q9P255 531 aa8.09□□□□□ -1.11
TRAFD1-205ENST00000548277 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 K7EQD1 137 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 NMBP08949 121 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 PET100P0DJ07 73 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 GYPEP15421 78 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 EVI2AP22794 236 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 SRIP30626 198 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 ZNF138P52744 262 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 SLAQ13239 276 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 ZNF479Q96JC4 524 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 MBD2Q9UBB5 411 aa8.08□□□□□ -1.12
TRAFD1-205ENST00000548277 J3QL48 77 aa8.07□□□□□ -1.12
TRAFD1-205ENST00000548277 PSCAO43653 123 aa8.07□□□□□ -1.12
TRAFD1-205ENST00000548277 EIF3GO75821 320 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRAFD1-205ENST00000548277 CSN1S1P47710 185 aa8.07□□□□□ -1.12
TRAFD1-205ENST00000548277 UBE2L3P68036 154 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-205ENST00000548277 IBA57Q5T440 356 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-205ENST00000548277 Q8TAT8 98 aa8.07□□□□□ -1.12
TRAFD1-205ENST00000548277 WFDC1Q9HC57 220 aa8.07□□□□□ -1.12
TRAFD1-205ENST00000548277 IGLV5-52A0A0A0MRZ9 124 aa8.06□□□□□ -1.12
TRAFD1-205ENST00000548277 LOC100131303A0A0U1RQF7 123 aa8.06□□□□□ -1.12
TRAFD1-205ENST00000548277 CRYGDP07320 174 aa8.06□□□□□ -1.12
TRAFD1-205ENST00000548277 KHDC3LQ587J8 217 aa8.06□□□□□ -1.12
TRAFD1-205ENST00000548277 PCNPQ8WW12 178 aaKnown RBP8.06□□□□□ -1.12
TRAFD1-205ENST00000548277 TRBV7-9A0A0J9YWB2 115 aa8.05□□□□□ -1.12
TRAFD1-205ENST00000548277 TAS2R45P59539 299 aa8.05□□□□□ -1.12
TRAFD1-205ENST00000548277 TMEM183BQ1AE95 376 aa8.05□□□□□ -1.12
TRAFD1-205ENST00000548277 Q6ZSN1 163 aa8.05□□□□□ -1.12
TRAFD1-205ENST00000548277 TMEM183AQ8IXX5 376 aa8.05□□□□□ -1.12
TRAFD1-205ENST00000548277 HYLS1Q96M11 299 aa8.05□□□□□ -1.12
TRAFD1-205ENST00000548277 IGHV3-16A0A0C4DH30 117 aa8.04□□□□□ -1.12
TRAFD1-205ENST00000548277 RBAKDNA6NC62 111 aa8.04□□□□□ -1.12
TRAFD1-205ENST00000548277 PGPA6NDG6 321 aa8.04□□□□□ -1.12
TRAFD1-205ENST00000548277 DIRC3C9JPN6 131 aa8.04□□□□□ -1.12
TRAFD1-205ENST00000548277 ZNF266Q14584 549 aa8.04□□□□□ -1.12
TRAFD1-205ENST00000548277 Q9HAA7 133 aa8.04□□□□□ -1.12
TRAFD1-205ENST00000548277 NAGKQ9UJ70 344 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms