RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 EDA2RQ9HAV5 297 aa9.95□□□□□ -0.82
PTCH1-213ENST00000546820 ZFP30Q9Y2G7 519 aa9.95□□□□□ -0.82
PTCH1-213ENST00000546820 KLF12Q9Y4X4 402 aa9.95□□□□□ -0.82
PTCH1-213ENST00000546820 TRAV34A0A0B4J273 112 aa9.94□□□□□ -0.82
PTCH1-213ENST00000546820 LOC102723971A0A1B0GUV8 181 aa9.94□□□□□ -0.82
PTCH1-213ENST00000546820 ZNF705GA8MUZ8 300 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-213ENST00000546820 PDE6DO43924 150 aa9.94□□□□□ -0.82
PTCH1-213ENST00000546820 ZNF324O75467 553 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-213ENST00000546820 IGLV2-11P01706 119 aa9.94□□□□□ -0.82
PTCH1-213ENST00000546820 BCL2P10415 239 aa9.94□□□□□ -0.82
PTCH1-213ENST00000546820 AKR1C3P42330 323 aa9.94□□□□□ -0.82
PTCH1-213ENST00000546820 MEF2BQ02080 365 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-213ENST00000546820 BTN1A1Q13410 526 aa9.94□□□□□ -0.82
PTCH1-213ENST00000546820 ZNF493Q6ZR52 646 aa9.94□□□□□ -0.82
PTCH1-213ENST00000546820 TRAV21A0A0B4J279 112 aa9.93□□□□□ -0.82
PTCH1-213ENST00000546820 RGS13O14921 159 aa9.93□□□□□ -0.82
PTCH1-213ENST00000546820 DEFB4AO15263 64 aa9.93□□□□□ -0.82
PTCH1-213ENST00000546820 RBMY1A1P0DJD3 496 aaKnown RBP9.93□□□□□ -0.82
PTCH1-213ENST00000546820 RBMY1CP0DJD4 496 aa9.93□□□□□ -0.82
PTCH1-213ENST00000546820 RBMY1FQ15415 496 aaKnown RBP9.93□□□□□ -0.82
PTCH1-213ENST00000546820 TMEM183BQ1AE95 376 aa9.93□□□□□ -0.82
PTCH1-213ENST00000546820 SMUG1Q53HV7 270 aa9.93□□□□□ -0.82
PTCH1-213ENST00000546820 TRBV6-1A0A0K0K1D8 114 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 CXorf65A6NEN9 183 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 RBFOX3A6NFN3 312 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 SPART-AS1P0CW21 52 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 RAB14P61106 215 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 Q6AWC8 147 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 FAM159AQ6UWV7 190 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
PTCH1-213ENST00000546820 C11orf45Q8TAV5 145 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 TVP23CQ96ET8 276 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 C16orf74Q96GX8 76 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 LINC00467Q9BRT7 94 aa9.92□□□□□ -0.82
PTCH1-213ENST00000546820 TEX48A0A1B0GUV7 120 aa9.91□□□□□ -0.82
PTCH1-213ENST00000546820 SCO2A0A1W2PP80 73 aa9.91□□□□□ -0.82
PTCH1-213ENST00000546820 CBY3A6NI87 242 aa9.91□□□□□ -0.82
PTCH1-213ENST00000546820 EMP1P54849 157 aa9.91□□□□□ -0.82
PTCH1-213ENST00000546820 PRR9Q5T870 116 aa9.91□□□□□ -0.82
PTCH1-213ENST00000546820 C2CD4CQ8TF44 421 aa9.91□□□□□ -0.82
PTCH1-213ENST00000546820 TMEM263Q8WUH6 116 aaKnown RBP9.91□□□□□ -0.82
PTCH1-213ENST00000546820 EIF5A2Q9GZV4 153 aaKnown RBP9.91□□□□□ -0.82
PTCH1-213ENST00000546820 MED9Q9NWA0 146 aa9.91□□□□□ -0.82
PTCH1-213ENST00000546820 TENM3Q9P273 2699 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 DNAH9Q9NYC9 4486 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 IGHV1OR15-1A0A075B7D0 117 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 GCGP01275 180 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 AZU1P20160 251 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 ANXA2RQ3ZCQ2 193 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 Q86TA4 180 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 BAGE2Q86Y30 109 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 C11orf52Q96A22 123 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 C8orf49Q96NF6 230 aa9.9□□□□□ -0.82
PTCH1-213ENST00000546820 FABP5P3A8MUU1 101 aa9.89□□□□□ -0.83
PTCH1-213ENST00000546820 LTAP01374 205 aa9.89□□□□□ -0.83
PTCH1-213ENST00000546820 PRM2P04554 102 aa9.89□□□□□ -0.83
PTCH1-213ENST00000546820 PFN1P07737 140 aaKnown RBP9.89□□□□□ -0.83
PTCH1-213ENST00000546820 ZNF506Q5JVG8 444 aa9.89□□□□□ -0.83
PTCH1-213ENST00000546820 TMEM183AQ8IXX5 376 aa9.89□□□□□ -0.83
PTCH1-213ENST00000546820 MUC7Q8TAX7 377 aa9.89□□□□□ -0.83
PTCH1-213ENST00000546820 KCNS1Q96KK3 526 aa9.89□□□□□ -0.83
PTCH1-213ENST00000546820 TIMM8BQ9Y5J9 83 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-213ENST00000546820 LYRM9A8MSI8 78 aa9.88□□□□□ -0.83
PTCH1-213ENST00000546820 SNURFLB1AK76 121 aa9.88□□□□□ -0.83
PTCH1-213ENST00000546820 RPL35P42766 123 aaKnown RBP9.88□□□□□ -0.83
PTCH1-213ENST00000546820 MUC21Q5SSG8 566 aa9.88□□□□□ -0.83
PTCH1-213ENST00000546820 ZNF767PQ75MW2 155 aa9.88□□□□□ -0.83
PTCH1-213ENST00000546820 COX8CQ7Z4L0 72 aa9.88□□□□□ -0.83
PTCH1-213ENST00000546820 RNASE8Q8TDE3 154 aaKnown RBP9.88□□□□□ -0.83
PTCH1-213ENST00000546820 FAM210AQ96ND0 272 aa9.88□□□□□ -0.83
PTCH1-213ENST00000546820 NAGKQ9UJ70 344 aa9.88□□□□□ -0.83
PTCH1-213ENST00000546820 TRGV11A0A075B6L2 103 aa9.87□□□□□ -0.83
PTCH1-213ENST00000546820 TMEM250H0YL14 139 aa9.87□□□□□ -0.83
PTCH1-213ENST00000546820 C3orf84H3BNL1 204 aa9.87□□□□□ -0.83
PTCH1-213ENST00000546820 NDUFS6O75380 124 aaKnown RBP9.87□□□□□ -0.83
PTCH1-213ENST00000546820 TOR2AQ5JU69 321 aa9.87□□□□□ -0.83
PTCH1-213ENST00000546820 Q6ZQT7 251 aa9.87□□□□□ -0.83
PTCH1-213ENST00000546820 SDF2L1Q9HCN8 221 aa9.87□□□□□ -0.83
PTCH1-213ENST00000546820 DKK2Q9UBU2 259 aa9.87□□□□□ -0.83
PTCH1-213ENST00000546820 STAB2Q8WWQ8 2551 aa9.86□□□□□ -0.83
PTCH1-213ENST00000546820 GNG4P50150 75 aa9.86□□□□□ -0.83
PTCH1-213ENST00000546820 ZNF80P51504 273 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-213ENST00000546820 NANOS2P60321 138 aaKnown RBP9.86□□□□□ -0.83
PTCH1-213ENST00000546820 TDRG1Q3Y452 100 aa9.86□□□□□ -0.83
PTCH1-213ENST00000546820 IBA57Q5T440 356 aaKnown RBP9.86□□□□□ -0.83
PTCH1-213ENST00000546820 FAM162BQ5T6X4 162 aa9.86□□□□□ -0.83
PTCH1-213ENST00000546820 FAM222AQ5U5X8 452 aa9.86□□□□□ -0.83
PTCH1-213ENST00000546820 PCNPQ8WW12 178 aaKnown RBP9.86□□□□□ -0.83
PTCH1-213ENST00000546820 NOP10Q9NPE3 64 aaKnown RBP9.86□□□□□ -0.83
PTCH1-213ENST00000546820 DAD1P61803 113 aa9.85□□□□□ -0.83
PTCH1-213ENST00000546820 ZNF415Q09FC8 603 aa9.85□□□□□ -0.83
PTCH1-213ENST00000546820 DAZ2Q13117 558 aaKnown RBP9.85□□□□□ -0.83
PTCH1-213ENST00000546820 PEA15Q15121 130 aa9.85□□□□□ -0.83
PTCH1-213ENST00000546820 SMIM12Q96EX1 92 aa9.85□□□□□ -0.83
PTCH1-213ENST00000546820 ZC2HC1AQ96GY0 325 aa9.85□□□□□ -0.83
PTCH1-213ENST00000546820 DERL1Q9BUN8 251 aa9.85□□□□□ -0.83
PTCH1-213ENST00000546820 SMDT1Q9H4I9 107 aa9.85□□□□□ -0.83
PTCH1-213ENST00000546820 BIN3Q9NQY0 253 aa9.85□□□□□ -0.83
PTCH1-213ENST00000546820 GSN-AS1Q9NRJ2 163 aa9.85□□□□□ -0.83
PTCH1-213ENST00000546820 HUWE1Q7Z6Z7 4374 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms