RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 RARRES2Q99969 163 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 TM2D2Q9BX73 214 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 SLC35B3Q9H1N7 401 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 PSG8Q9UQ74 426 aa6.42□□□□□ -1.38
VPS29-203ENST00000546588 OR7C2O60412 319 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 SFTA3P0C7M3 94 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 ORM2P19652 201 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 PROK1P58294 105 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 ERVFC1-1P60608 527 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 LYZP61626 148 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 RHEBQ15382 184 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 C10orf99Q6UWK7 81 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 BPIFA4PQ86YQ2 179 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 C20orf144Q9BQM9 153 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 PAXXQ9BUH6 204 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 GNG13Q9P2W3 67 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 RABAC1Q9UI14 185 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 S4R3C0 116 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 HIVEP2P31629 2446 aa6.41□□□□□ -1.38
VPS29-203ENST00000546588 TRBV19A0A075B6N1 114 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 KIR2DL5BA0A0G2JN68 375 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 KIR2DL5BA0A0G2JPC4 375 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 A0A1B0GUS0 222 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 GGTLC3B5MD39 225 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 C11orf94C9JXX5 98 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 HMGB3O15347 200 aaKnown RBP6.4□□□□□ -1.38
VPS29-203ENST00000546588 CCL25O15444 150 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 TRBV12-3P01733 135 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 IGHV3-23P01764 117 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 RPL7P18124 248 aaKnown RBP6.4□□□□□ -1.38
VPS29-203ENST00000546588 UBE2L3P68036 154 aaKnown RBP6.4□□□□□ -1.38
VPS29-203ENST00000546588 TMEM241Q24JQ0 296 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 ZNF329Q86UD4 541 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 NIT1Q86X76 327 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 KIR2DL5AQ8N109 375 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 KIR2DL5BQ8NHK3 375 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 C17orf77Q96MU5 243 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 SIGMAR1Q99720 223 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 EIF5A2Q9GZV4 153 aaKnown RBP6.4□□□□□ -1.38
VPS29-203ENST00000546588 DAZ1Q9NQZ3 744 aaKnown RBP6.4□□□□□ -1.38
VPS29-203ENST00000546588 DOK5Q9P104 306 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 YTHDF2Q9Y5A9 579 aaKnown RBP6.4□□□□□ -1.38
VPS29-203ENST00000546588 LY96Q9Y6Y9 160 aa6.4□□□□□ -1.38
VPS29-203ENST00000546588 FN1P02751 2386 aaKnown RBP6.39□□□□□ -1.39
VPS29-203ENST00000546588 SONP18583 2426 aaKnown RBP6.39□□□□□ -1.39
VPS29-203ENST00000546588 TRAV5A0A0B4J249 113 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 NDUFB4O95168 129 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 MT-ND4LP03901 98 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 TYMSP04818 313 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 PYYP10082 97 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 ATP5G3P48201 142 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 UNQ9165/PRO28630Q6UXU0 137 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 FA2HQ7L5A8 372 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 CYB561D1Q8N8Q1 229 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 OR4F5Q8NH21 305 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 HIST1H2BAQ96A08 127 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 GNB4Q9HAV0 340 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 ZNF586Q9NXT0 402 aa6.39□□□□□ -1.39
VPS29-203ENST00000546588 TRBV6-1A0A0K0K1D8 114 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 A0A1B0GV50 99 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 CYSRT1A8MQ03 144 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 C9JCJ5 164 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 H3BQ15 152 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 NPPCP23582 126 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 PNRC1Q12796 327 aaPredicted RBP6.38□□□□□ -1.39
VPS29-203ENST00000546588 KLF5Q13887 457 aaPredicted RBP6.38□□□□□ -1.39
VPS29-203ENST00000546588 C5orf17Q8NAS9 161 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 MRPL53Q96EL3 112 aaKnown RBP6.38□□□□□ -1.39
VPS29-203ENST00000546588 BTF3L4Q96K17 158 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 METTL26Q96S19 204 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 OTORQ9NRC9 128 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 SMCO4Q9NRQ5 59 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 KLF12Q9Y4X4 402 aa6.38□□□□□ -1.39
VPS29-203ENST00000546588 IGHV7-4-1A0A0J9YVY3 117 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 M0QZ24 198 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 SOCS3O14543 225 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 IGHV3-11P01762 117 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 RIPPLY3P57055 190 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 SOHLH1Q5JUK2 328 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 STHQ8IWL8 128 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 OR4F17Q8NGA8 305 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 OR4F4Q96R69 305 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 SLC50A1Q9BRV3 221 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 PARLQ9H300 379 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 SDF2L1Q9HCN8 221 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 SIGLEC8Q9NYZ4 499 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 SMAD5-AS1Q9Y6J3 95 aa6.37□□□□□ -1.39
VPS29-203ENST00000546588 TRBV20OR9-2A0A075B6H5 130 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 IGHV4OR15-8A0A075B7B6 117 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 A0A087WW49 117 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 A0A087WWC5 75 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 A0A1W2PS18 150 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 B4DEV8 164 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 RHODO00212 210 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 GCGP01275 180 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 HOXD3P31249 432 aaPredicted RBP6.36□□□□□ -1.39
VPS29-203ENST00000546588 PSG9Q00887 426 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 FAM106AQ4KMX7 169 aa6.36□□□□□ -1.39
VPS29-203ENST00000546588 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms