RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SPINK13Q1W4C9 94 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 TEX261Q6UWH6 196 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 AMTNQ6UX39 209 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 GOLT1AQ6ZVE7 132 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 CYB561D1Q8N8Q1 229 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 Q8TAT8 98 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 RXFP4Q8TDU9 374 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 ODF3Q96PU9 254 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 TM2D3Q9BRN9 247 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 TCEAL7Q9BRU2 100 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 C1QTNF4Q9BXJ3 329 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 CSTL1Q9H114 145 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 SLC35B3Q9H1N7 401 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 RETNQ9HD89 108 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 MANBALQ9NQG1 85 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 GNG13Q9P2W3 67 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 SERTM2A0A1B0GWG4 89 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 RBAKDNA6NC62 111 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 PGPA6NDG6 321 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 PEX7O00628 323 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 PAGE4O60829 102 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 INSP01308 110 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 IFNA1P01562 189 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 IFNA7P01567 189 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 AMBPP02760 352 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 TCRAP04437 139 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 GIG44P09565 113 aaPredicted RBP4.61□□□□□ -1.67
PRKDC-211ENST00000546304 BCL2P10415 239 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 ATP5G3P48201 142 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 FXYD7P58549 80 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 ZNF674Q2M3X9 581 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 TMEM78Q5T7P6 136 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 CST9LP1Q5W188 147 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 C9orf47Q6ZRZ4 202 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 Q6ZWC4 215 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 ZNF680Q8NEM1 530 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 RCHY1Q96PM5 261 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 VGLL1Q99990 258 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 ATG101Q9BSB4 218 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 NKX6-2Q9C056 277 aaPredicted RBP4.61□□□□□ -1.67
PRKDC-211ENST00000546304 PPP1R14DQ9NXH3 145 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 XCL2Q9UBD3 114 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
PRKDC-211ENST00000546304 TRAV12-2A0A075B6T6 113 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 TRAV8-1A0A0A6YYK1 113 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 C11orf94C9JXX5 98 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 K7EQM0 130 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 NHLRC4P0CG21 123 aaPredicted RBP4.6□□□□□ -1.67
PRKDC-211ENST00000546304 CT45A10P0DMU9 189 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 TSPOP30536 169 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 LEPP41159 167 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 CDKN1BP46527 198 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 ZNF138P52744 262 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 CCL20P78556 96 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 ERCC8Q13216 396 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 GFI1BQ5VTD9 330 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 Q86TA4 180 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 CCDC28AQ8IWP9 274 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 HIST1H2BAQ96A08 127 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 IGF2BP2-AS1Q96M15 143 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 AGPAT4-IT1Q9H0P7 198 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 EPDR1Q9UM22 224 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 TP53TG1Q9Y2A0 90 aa4.6□□□□□ -1.67
PRKDC-211ENST00000546304 DYNC2H1Q8NCM8 4307 aaKnown RBP4.59□□□□□ -1.67
PRKDC-211ENST00000546304 TRBV7-9A0A0J9YWB2 115 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 FBLL1A6NHQ2 334 aaKnown RBP4.59□□□□□ -1.67
PRKDC-211ENST00000546304 PRSS29PA6NIE9 313 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 KLLNB2CW77 178 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 CRXO43186 299 aaPredicted RBP4.59□□□□□ -1.67
PRKDC-211ENST00000546304 SPRY2O43597 315 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 NMBP08949 121 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 CRISP2P16562 243 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 TAGLN2P37802 199 aaKnown RBP4.59□□□□□ -1.67
PRKDC-211ENST00000546304 AKR1C3P42330 323 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 MEF2BQ02080 365 aaPredicted RBP4.59□□□□□ -1.67
PRKDC-211ENST00000546304 PRR9Q5T870 116 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 ZFAND2AQ8N6M9 145 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 TMEM75Q8N9X5 138 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 CSNK1G2-AS1Q8NCQ2 148 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 LYPD6BQ8NI32 183 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 PCNPQ8WW12 178 aaKnown RBP4.59□□□□□ -1.67
PRKDC-211ENST00000546304 C11orf52Q96A22 123 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 RNF183Q96D59 192 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 FAM19A4Q96LR4 140 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 LINC00477Q96M19 166 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 OVOL2Q9BRP0 275 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 NDFIP1Q9BT67 221 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 ZNF492Q9P255 531 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 GOLT1BQ9Y3E0 138 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 LENEPQ9Y5L5 61 aa4.59□□□□□ -1.67
PRKDC-211ENST00000546304 PLECQ15149 4684 aaKnown RBP4.58□□□□□ -1.68
PRKDC-211ENST00000546304 CSMD3Q7Z407 3707 aa4.58□□□□□ -1.68
PRKDC-211ENST00000546304 IGHV3OR16-12A0A075B7B8 117 aa4.58□□□□□ -1.68
PRKDC-211ENST00000546304 LOC102723971A0A1B0GUV8 181 aa4.58□□□□□ -1.68
PRKDC-211ENST00000546304 C7orf71A4D174 169 aa4.58□□□□□ -1.68
PRKDC-211ENST00000546304 F6UZH7 168 aa4.58□□□□□ -1.68
PRKDC-211ENST00000546304 IGLV2-11P01706 119 aa4.58□□□□□ -1.68
PRKDC-211ENST00000546304 RBMY1A1P0DJD3 496 aaKnown RBP4.58□□□□□ -1.68
PRKDC-211ENST00000546304 RBMY1CP0DJD4 496 aa4.58□□□□□ -1.68
PRKDC-211ENST00000546304 UBE2G1P62253 170 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms