RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ZNF767PQ75MW2 155 aa12.06□□□□□ -0.48
LTBR-215ENST00000546296 PHLDA1Q8WV24 401 aaPredicted RBP12.06□□□□□ -0.48
LTBR-215ENST00000546296 C16orf74Q96GX8 76 aa12.06□□□□□ -0.48
LTBR-215ENST00000546296 TREM1Q9NP99 234 aa12.06□□□□□ -0.48
LTBR-215ENST00000546296 PSG8Q9UQ74 426 aa12.06□□□□□ -0.48
LTBR-215ENST00000546296 TEX48A0A1B0GUV7 120 aa12.05□□□□□ -0.48
LTBR-215ENST00000546296 FBLL1A6NHQ2 334 aaKnown RBP12.05□□□□□ -0.48
LTBR-215ENST00000546296 RGS13O14921 159 aa12.05□□□□□ -0.48
LTBR-215ENST00000546296 CEMP1Q6PRD7 247 aaPredicted RBP12.05□□□□□ -0.48
LTBR-215ENST00000546296 PRNTQ86SH4 94 aa12.05□□□□□ -0.48
LTBR-215ENST00000546296 HIST1H2BAQ96A08 127 aa12.05□□□□□ -0.48
LTBR-215ENST00000546296 LINC00479Q96M42 142 aa12.05□□□□□ -0.48
LTBR-215ENST00000546296 DKK2Q9UBU2 259 aa12.05□□□□□ -0.48
LTBR-215ENST00000546296 ARL2-SNX15V9GYD0 113 aa12.05□□□□□ -0.48
LTBR-215ENST00000546296 TRAV1-1A0A0B4J248 108 aa12.04□□□□□ -0.48
LTBR-215ENST00000546296 TRAV34A0A0B4J273 112 aa12.04□□□□□ -0.48
LTBR-215ENST00000546296 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
LTBR-215ENST00000546296 CBY3A6NI87 242 aa12.04□□□□□ -0.48
LTBR-215ENST00000546296 CCL20P78556 96 aa12.04□□□□□ -0.48
LTBR-215ENST00000546296 FLI1Q01543 452 aaPredicted RBP12.04□□□□□ -0.48
LTBR-215ENST00000546296 C12orf74Q32Q52 190 aa12.04□□□□□ -0.48
LTBR-215ENST00000546296 ALKAL2Q6UX46 152 aa12.04□□□□□ -0.48
LTBR-215ENST00000546296 TMEM75Q8N9X5 138 aa12.04□□□□□ -0.48
LTBR-215ENST00000546296 TMEM263Q8WUH6 116 aaKnown RBP12.04□□□□□ -0.48
LTBR-215ENST00000546296 GNG13Q9P2W3 67 aa12.04□□□□□ -0.48
LTBR-215ENST00000546296 KLK5Q9Y337 293 aaPredicted RBP12.04□□□□□ -0.48
LTBR-215ENST00000546296 ATP5G3P48201 142 aa12.03□□□□□ -0.48
LTBR-215ENST00000546296 SAPCD1Q5SSQ6 148 aa12.03□□□□□ -0.48
LTBR-215ENST00000546296 Q6ZQT7 251 aa12.03□□□□□ -0.48
LTBR-215ENST00000546296 Q6ZTC4 211 aa12.03□□□□□ -0.48
LTBR-215ENST00000546296 EIF4E3Q8N5X7 224 aaKnown RBP12.03□□□□□ -0.48
LTBR-215ENST00000546296 TVP23CQ96ET8 276 aa12.03□□□□□ -0.48
LTBR-215ENST00000546296 TCEAL7Q9BRU2 100 aa12.03□□□□□ -0.48
LTBR-215ENST00000546296 TIMM8BQ9Y5J9 83 aaPredicted RBP12.03□□□□□ -0.48
LTBR-215ENST00000546296 IGHV1OR15-1A0A075B7D0 117 aa12.02□□□□□ -0.49
LTBR-215ENST00000546296 LYRM9A8MSI8 78 aa12.02□□□□□ -0.49
LTBR-215ENST00000546296 C11orf94C9JXX5 98 aa12.02□□□□□ -0.49
LTBR-215ENST00000546296 IGLV2-11P01706 119 aa12.02□□□□□ -0.49
LTBR-215ENST00000546296 DAD1P61803 113 aa12.02□□□□□ -0.49
LTBR-215ENST00000546296 RNASE8Q8TDE3 154 aaKnown RBP12.02□□□□□ -0.49
LTBR-215ENST00000546296 LINC00467Q9BRT7 94 aa12.02□□□□□ -0.49
LTBR-215ENST00000546296 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
LTBR-215ENST00000546296 TRAV10A0A0B4J240 114 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 TRAV21A0A0B4J279 112 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 SNURFLB1AK76 121 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 UBE2G1P62253 170 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 MUC21Q5SSG8 566 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 Q6AWC8 147 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 FAM159AQ6UWV7 190 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 ZNF680Q8NEM1 530 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 C8orf49Q96NF6 230 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 NOP10Q9NPE3 64 aaKnown RBP12.01□□□□□ -0.49
LTBR-215ENST00000546296 NAGKQ9UJ70 344 aa12.01□□□□□ -0.49
LTBR-215ENST00000546296 PLAC8L1A1L4L8 177 aa12□□□□□ -0.49
LTBR-215ENST00000546296 IFNA1P01562 189 aa12□□□□□ -0.49
LTBR-215ENST00000546296 DEFB130BP0DP73 79 aa12□□□□□ -0.49
LTBR-215ENST00000546296 DEFB130AP0DP74 79 aa12□□□□□ -0.49
LTBR-215ENST00000546296 AKR1C3P42330 323 aa12□□□□□ -0.49
LTBR-215ENST00000546296 BLOC1S1P78537 153 aa12□□□□□ -0.49
LTBR-215ENST00000546296 ANXA2RQ3ZCQ2 193 aa12□□□□□ -0.49
LTBR-215ENST00000546296 SMUG1Q53HV7 270 aa12□□□□□ -0.49
LTBR-215ENST00000546296 FMC1Q96HJ9 113 aa12□□□□□ -0.49
LTBR-215ENST00000546296 TENM2Q9NT68 2774 aa12□□□□□ -0.49
LTBR-215ENST00000546296 CSMD3Q7Z407 3707 aa11.99□□□□□ -0.49
LTBR-215ENST00000546296 DEFB131BA0A096LNP1 70 aa11.99□□□□□ -0.49
LTBR-215ENST00000546296 GCGP01275 180 aa11.99□□□□□ -0.49
LTBR-215ENST00000546296 C2CD4CQ8TF44 421 aa11.99□□□□□ -0.49
LTBR-215ENST00000546296 GSN-AS1Q9NRJ2 163 aa11.99□□□□□ -0.49
LTBR-215ENST00000546296 TP53TG3Q9ULZ0 132 aa11.99□□□□□ -0.49
LTBR-215ENST00000546296 HTN3P15516 51 aa11.98□□□□□ -0.49
LTBR-215ENST00000546296 Q86TA4 180 aa11.98□□□□□ -0.49
LTBR-215ENST00000546296 SCO2A0A1W2PP80 73 aa11.97□□□□□ -0.49
LTBR-215ENST00000546296 IGLL5B9A064 214 aa11.97□□□□□ -0.49
LTBR-215ENST00000546296 S100A9P06702 114 aaKnown RBP11.97□□□□□ -0.49
LTBR-215ENST00000546296 TMEM183BQ1AE95 376 aa11.97□□□□□ -0.49
LTBR-215ENST00000546296 TMEM183AQ8IXX5 376 aa11.97□□□□□ -0.49
LTBR-215ENST00000546296 ZFP30Q9Y2G7 519 aa11.97□□□□□ -0.49
LTBR-215ENST00000546296 KLF12Q9Y4X4 402 aa11.97□□□□□ -0.49
LTBR-215ENST00000546296 TRGV11A0A075B6L2 103 aa11.96□□□□□ -0.49
LTBR-215ENST00000546296 ZNF80P51504 273 aaPredicted RBP11.96□□□□□ -0.49
LTBR-215ENST00000546296 ZNF415Q09FC8 603 aa11.96□□□□□ -0.49
LTBR-215ENST00000546296 DAZ2Q13117 558 aaKnown RBP11.96□□□□□ -0.49
LTBR-215ENST00000546296 C11orf72Q8NBR9 251 aa11.96□□□□□ -0.49
LTBR-215ENST00000546296 TXNDC17Q9BRA2 123 aa11.96□□□□□ -0.49
LTBR-215ENST00000546296 STARD9Q9P2P6 4700 aa11.95□□□□□ -0.5
LTBR-215ENST00000546296 TRBV6-1A0A0K0K1D8 114 aa11.95□□□□□ -0.5
LTBR-215ENST00000546296 GAGE12BA1L429 117 aa11.95□□□□□ -0.5
LTBR-215ENST00000546296 GAGE7O76087 117 aa11.95□□□□□ -0.5
LTBR-215ENST00000546296 PFN1P07737 140 aaKnown RBP11.95□□□□□ -0.5
LTBR-215ENST00000546296 GAGE12FP0CL80 117 aa11.95□□□□□ -0.5
LTBR-215ENST00000546296 GAGE12GP0CL81 117 aa11.95□□□□□ -0.5
LTBR-215ENST00000546296 GAGE12IP0CL82 117 aa11.95□□□□□ -0.5
LTBR-215ENST00000546296 IBA57Q5T440 356 aaKnown RBP11.95□□□□□ -0.5
LTBR-215ENST00000546296 KCNS1Q96KK3 526 aa11.95□□□□□ -0.5
LTBR-215ENST00000546296 SDF2L1Q9HCN8 221 aa11.95□□□□□ -0.5
LTBR-215ENST00000546296 FABP5P3A8MUU1 101 aa11.94□□□□□ -0.5
LTBR-215ENST00000546296 GNRH2O43555 120 aa11.94□□□□□ -0.5
LTBR-215ENST00000546296 BCL2P10415 239 aa11.94□□□□□ -0.5
LTBR-215ENST00000546296 TAGLN2P37802 199 aaKnown RBP11.94□□□□□ -0.5
LTBR-215ENST00000546296 TCL1AP56279 114 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms