RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 ORM1P02763 201 aa12.85□□□□□ -0.35
CLPTM1-203ENST00000546079 DLX6P56179 175 aa12.85□□□□□ -0.35
CLPTM1-203ENST00000546079 UBE2D3P61077 147 aa12.85□□□□□ -0.35
CLPTM1-203ENST00000546079 UBE2D2P62837 147 aa12.85□□□□□ -0.35
CLPTM1-203ENST00000546079 ACACAQ13085 2346 aa12.84□□□□□ -0.35
CLPTM1-203ENST00000546079 UBE2D1P51668 147 aa12.84□□□□□ -0.35
CLPTM1-203ENST00000546079 SS18L2Q9UHA2 77 aa12.84□□□□□ -0.35
CLPTM1-203ENST00000546079 LINC01549A6NIU2 74 aa12.84□□□□□ -0.35
CLPTM1-203ENST00000546079 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
CLPTM1-203ENST00000546079 PSMB2P49721 201 aa12.84□□□□□ -0.35
CLPTM1-203ENST00000546079 LYRM7Q5U5X0 104 aa12.84□□□□□ -0.35
CLPTM1-203ENST00000546079 Q8TAT8 98 aa12.84□□□□□ -0.35
CLPTM1-203ENST00000546079 CUL9Q8IWT3 2517 aa12.84□□□□□ -0.35
CLPTM1-203ENST00000546079 PRSS29PA6NIE9 313 aa12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 LGALS1P09382 135 aaKnown RBP12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 CCL8P80075 99 aa12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 FAM57AQ8TBR7 257 aa12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 TNFRSF13BO14836 293 aaPredicted RBP12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 NDUFB3O43676 98 aa12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 IGHV1-8P0DP01 117 aa12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 ZFAND6Q6FIF0 208 aa12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 SBSPONQ8IVN8 264 aa12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 PTH2Q96A98 100 aa12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 RALYQ9UKM9 306 aaKnown RBP12.83□□□□□ -0.36
CLPTM1-203ENST00000546079 TMEM262E9PQX1 116 aa12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 ZNF672Q499Z4 452 aaPredicted RBP12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 ZFP2Q6ZN57 461 aa12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 NRACQ8N912 160 aa12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 RP1L1Q8IWN7 2480 aaPredicted RBP12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 DCHS1Q96JQ0 3298 aa12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 LOC107984156A0A0G2JMH3 177 aa12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 ZNF688P0C7X2 276 aa12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 TMEM155Q4W5P6 130 aa12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 ARL17AQ8IVW1 177 aa12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 FBXL15Q9H469 300 aa12.82□□□□□ -0.36
CLPTM1-203ENST00000546079 MAP1BP46821 2468 aaKnown RBP12.81□□□□□ -0.36
CLPTM1-203ENST00000546079 TMEM78Q5T7P6 136 aa12.81□□□□□ -0.36
CLPTM1-203ENST00000546079 TEX29Q8N6K0 151 aa12.81□□□□□ -0.36
CLPTM1-203ENST00000546079 RAB1BQ9H0U4 201 aa12.81□□□□□ -0.36
CLPTM1-203ENST00000546079 ZGRF1Q86YA3 2104 aa12.81□□□□□ -0.36
CLPTM1-203ENST00000546079 RPL7P18124 248 aaKnown RBP12.8□□□□□ -0.36
CLPTM1-203ENST00000546079 LOXP28300 417 aaPredicted RBP12.8□□□□□ -0.36
CLPTM1-203ENST00000546079 C22orf34Q6ZV56 151 aa12.8□□□□□ -0.36
CLPTM1-203ENST00000546079 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
CLPTM1-203ENST00000546079 ICE1Q9Y2F5 2266 aa12.8□□□□□ -0.36
CLPTM1-203ENST00000546079 TRBV20-1A0A075B6N2 111 aa12.8□□□□□ -0.36
CLPTM1-203ENST00000546079 EFNA4P52798 201 aa12.8□□□□□ -0.36
CLPTM1-203ENST00000546079 OR11H6Q8NGC7 330 aa12.8□□□□□ -0.36
CLPTM1-203ENST00000546079 BSNQ9UPA5 3926 aa12.8□□□□□ -0.36
CLPTM1-203ENST00000546079 IGHV1-3A0A0C4DH29 117 aa12.79□□□□□ -0.36
CLPTM1-203ENST00000546079 FOXC1Q12948 553 aa12.79□□□□□ -0.36
CLPTM1-203ENST00000546079 LYPD2Q6UXB3 125 aa12.79□□□□□ -0.36
CLPTM1-203ENST00000546079 Q8NA96 180 aa12.79□□□□□ -0.36
CLPTM1-203ENST00000546079 CITED1Q99966 193 aa12.79□□□□□ -0.36
CLPTM1-203ENST00000546079 RAXQ9Y2V3 346 aa12.79□□□□□ -0.36
CLPTM1-203ENST00000546079 ATMQ13315 3056 aa12.79□□□□□ -0.36
CLPTM1-203ENST00000546079 IGHG4P01861 327 aa12.79□□□□□ -0.36
CLPTM1-203ENST00000546079 DMXL2Q8TDJ6 3036 aa12.79□□□□□ -0.36
CLPTM1-203ENST00000546079 A8MWV9 139 aa12.78□□□□□ -0.36
CLPTM1-203ENST00000546079 TMEM178BH3BS89 294 aa12.78□□□□□ -0.36
CLPTM1-203ENST00000546079 CD7P09564 240 aa12.78□□□□□ -0.36
CLPTM1-203ENST00000546079 SRD5A1P18405 259 aa12.78□□□□□ -0.36
CLPTM1-203ENST00000546079 FAM27E3Q08E93 113 aa12.78□□□□□ -0.36
CLPTM1-203ENST00000546079 UFC1Q9Y3C8 167 aa12.78□□□□□ -0.36
CLPTM1-203ENST00000546079 PLCE1Q9P212 2302 aa12.78□□□□□ -0.36
CLPTM1-203ENST00000546079 IGLV1-47P01700 117 aa12.78□□□□□ -0.36
CLPTM1-203ENST00000546079 RNF5Q99942 180 aa12.78□□□□□ -0.36
CLPTM1-203ENST00000546079 LINC01548A6NM66 108 aa12.77□□□□□ -0.36
CLPTM1-203ENST00000546079 C17orf100A8MU93 164 aa12.77□□□□□ -0.36
CLPTM1-203ENST00000546079 B5MCH6 92 aa12.77□□□□□ -0.36
CLPTM1-203ENST00000546079 NHLRC4P0CG21 123 aaPredicted RBP12.77□□□□□ -0.36
CLPTM1-203ENST00000546079 GFRALQ6UXV0 394 aa12.77□□□□□ -0.36
CLPTM1-203ENST00000546079 CTSZQ9UBR2 303 aa12.77□□□□□ -0.36
CLPTM1-203ENST00000546079 TRGV3P03979 118 aa12.77□□□□□ -0.37
CLPTM1-203ENST00000546079 SRSF9Q13242 221 aaKnown RBP eCLIP12.77□□□□□ -0.37
CLPTM1-203ENST00000546079 NEXN-AS1Q8NBZ9 246 aa12.77□□□□□ -0.37
CLPTM1-203ENST00000546079 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.37
CLPTM1-203ENST00000546079 CNIH1O95406 144 aa12.76□□□□□ -0.37
CLPTM1-203ENST00000546079 TCL1BO95988 128 aa12.76□□□□□ -0.37
CLPTM1-203ENST00000546079 SFTA2Q6UW10 78 aa12.76□□□□□ -0.37
CLPTM1-203ENST00000546079 NUP37Q8NFH4 326 aa12.76□□□□□ -0.37
CLPTM1-203ENST00000546079 A0A0G2JNJ9 132 aa12.76□□□□□ -0.37
CLPTM1-203ENST00000546079 ZNF815PA8K554 130 aa12.76□□□□□ -0.37
CLPTM1-203ENST00000546079 RHODO00212 210 aa12.76□□□□□ -0.37
CLPTM1-203ENST00000546079 NDUFA11Q86Y39 141 aa12.76□□□□□ -0.37
CLPTM1-203ENST00000546079 Q9UFV3 132 aa12.76□□□□□ -0.37
CLPTM1-203ENST00000546079 FAM90A27PA6NNH2 459 aa12.75□□□□□ -0.37
CLPTM1-203ENST00000546079 BUB1B-PAK6H3BSN5 160 aa12.75□□□□□ -0.37
CLPTM1-203ENST00000546079 SLC25A16P16260 332 aa12.75□□□□□ -0.37
CLPTM1-203ENST00000546079 SCGB1D4Q6XE38 83 aa12.75□□□□□ -0.37
CLPTM1-203ENST00000546079 TRAV26-2A0A0B4J265 109 aa12.74□□□□□ -0.37
CLPTM1-203ENST00000546079 IGKV3D-20A0A0C4DH25 116 aa12.74□□□□□ -0.37
CLPTM1-203ENST00000546079 COX6B1P14854 86 aa12.74□□□□□ -0.37
CLPTM1-203ENST00000546079 MFAP4P55083 255 aa12.74□□□□□ -0.37
CLPTM1-203ENST00000546079 TOMM6Q96B49 74 aa12.74□□□□□ -0.37
CLPTM1-203ENST00000546079 SCGB3A1Q96QR1 104 aa12.74□□□□□ -0.37
CLPTM1-203ENST00000546079 KAAG1Q9UBP8 84 aa12.74□□□□□ -0.37
CLPTM1-203ENST00000546079 SMAD5-AS1Q9Y6J3 95 aa12.74□□□□□ -0.37
CLPTM1-203ENST00000546079 PIEZO2Q9H5I5 2752 aa12.74□□□□□ -0.37
CLPTM1-203ENST00000546079 CEP295Q9C0D2 2601 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms