RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-216ENST00000545170 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-216ENST00000545170 FAM223BA6NKX1 122 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 WDR86Q86TI4 376 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 FAM223AQ8IWN6 122 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 KIAA0100Q14667 2235 aaKnown RBP6.85□□□□□ -1.31
ATXN3-216ENST00000545170 IGKV1-6A0A0C4DH72 117 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 RHOHQ15669 191 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 TEX36Q5VZQ5 186 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 COL24A1Q17RW2 1714 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 BUB1B-PAK6H3BSN5 160 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 UBE2DNLQ8IWF7 75 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 RNF5Q99942 180 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 NDUFA11Q86Y39 141 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 DEFB130BP0DP73 79 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 DEFB130AP0DP74 79 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 RNF166Q96A37 237 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-216ENST00000545170 TDRD6O60522 2096 aaKnown RBP6.85□□□□□ -1.31
ATXN3-216ENST00000545170 ATP5EP56381 51 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-216ENST00000545170 FAM110AQ9BQ89 295 aa6.85□□□□□ -1.31
ATXN3-216ENST00000545170 Q9HAA7 133 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 SRRM5B3KS81 715 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 LECT2O14960 151 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 NSUN5P1Q3KNT7 163 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 TNRC6BQ9UPQ9 1833 aaKnown RBP6.84□□□□□ -1.31
ATXN3-216ENST00000545170 WI2-2373I1.2A0A1W2PRP0 233 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 IGKV1-39P01597 117 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 IGKV1D-39P04432 117 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-216ENST00000545170 C9orf106Q8NAJ2 232 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 NDUFA4L2Q9NRX3 87 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 A6NED7 52 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
ATXN3-216ENST00000545170 HEATR5AQ86XA9 2040 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 ZNF831Q5JPB2 1677 aa6.84□□□□□ -1.31
ATXN3-216ENST00000545170 H3BQ85 93 aa6.84□□□□□ -1.32
ATXN3-216ENST00000545170 C11orf44Q8N8P7 122 aa6.84□□□□□ -1.32
ATXN3-216ENST00000545170 GAFA1Q96PS6 74 aa6.84□□□□□ -1.32
ATXN3-216ENST00000545170 FREM3P0C091 2139 aa6.84□□□□□ -1.32
ATXN3-216ENST00000545170 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-216ENST00000545170 PARP14Q460N5 1801 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 ADAMTSL1Q8N6G6 1762 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 FANCD2OSQ96PS1 177 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 E9PLD3 99 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 ZNF134P52741 427 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 ZNRD1Q9P1U0 126 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 HIST2H2BCQ6DN03 193 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 HIST2H2BDQ6DRA6 164 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 Q6ZR03 302 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 CFHR1Q03591 330 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 HIGD2BQ4VC39 106 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 NCR3O14931 201 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 ENHOQ6UWT2 76 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 PIFOQ8TCI5 191 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 PLA2G2EQ9NZK7 142 aa6.83□□□□□ -1.32
ATXN3-216ENST00000545170 SIPA1L3O60292 1781 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-216ENST00000545170 XCL1P47992 114 aa6.82□□□□□ -1.32
ATXN3-216ENST00000545170 TMEM256-PLSCR3K7ERE1 68 aa6.82□□□□□ -1.32
ATXN3-216ENST00000545170 USMG5Q96IX5 58 aa6.82□□□□□ -1.32
ATXN3-216ENST00000545170 ABCA7Q8IZY2 2146 aa6.82□□□□□ -1.32
ATXN3-216ENST00000545170 ARTNQ5T4W7 220 aa6.82□□□□□ -1.32
ATXN3-216ENST00000545170 FANCMQ8IYD8 2048 aa6.82□□□□□ -1.32
ATXN3-216ENST00000545170 DEFB131AP59861 70 aa6.82□□□□□ -1.32
ATXN3-216ENST00000545170 C17orf77Q96MU5 243 aa6.82□□□□□ -1.32
ATXN3-216ENST00000545170 RBBP6Q7Z6E9 1792 aaKnown RBP6.82□□□□□ -1.32
ATXN3-216ENST00000545170 IGKV1D-17A0A075B6S4 117 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 IGHV1-69DA0A0B4J2H0 117 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 E9PLN8 166 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 ETV2O00321 342 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-216ENST00000545170 UBE2BP63146 152 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 DAZ1Q9NQZ3 744 aaKnown RBP6.81□□□□□ -1.32
ATXN3-216ENST00000545170 BTAF1O14981 1849 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 IGKV2D-26A0A0A0MRZ7 120 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 K7EM74 188 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 IGF2BP2-AS1Q96M15 143 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 NDUFB1O75438 58 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 ARID2Q68CP9 1835 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 IGHV4OR15-8A0A075B7B6 117 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 A0A087WW49 117 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 IGLV3-32A0A0A0MS00 114 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 GNRH2O43555 120 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 UBE2E1P51965 193 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 DEFB123Q8N688 67 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 SERP2Q8N6R1 65 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 TOMM6Q96B49 74 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 PMAIP1Q13794 54 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 XCL2Q9UBD3 114 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 TP73-AS1Q9UF72 201 aa6.81□□□□□ -1.32
ATXN3-216ENST00000545170 CSDC2Q9Y534 153 aaKnown RBP6.81□□□□□ -1.32
ATXN3-216ENST00000545170 ODF1Q14990 250 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 RP1P56715 2156 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 COX7CP15954 63 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 DAZ2Q13117 558 aaKnown RBP6.8□□□□□ -1.32
ATXN3-216ENST00000545170 DAZ4Q86SG3 579 aaKnown RBP6.8□□□□□ -1.32
ATXN3-216ENST00000545170 DAZ3Q9NR90 486 aaKnown RBP6.8□□□□□ -1.32
ATXN3-216ENST00000545170 TMEM178BH3BS89 294 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 OVOL3O00110 214 aa6.8□□□□□ -1.32
ATXN3-216ENST00000545170 MINOS1Q5TGZ0 78 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms