RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 GZMBP10144 247 aa8.47□□□□□ -1.05
TNC-213ENST00000544972 CD33P20138 364 aa8.47□□□□□ -1.05
TNC-213ENST00000544972 Q6ZQT7 251 aa8.47□□□□□ -1.05
TNC-213ENST00000544972 CITED1Q99966 193 aa8.47□□□□□ -1.05
TNC-213ENST00000544972 GFRA4Q9GZZ7 299 aa8.47□□□□□ -1.05
TNC-213ENST00000544972 ZNF256Q9Y2P7 627 aaPredicted RBP8.47□□□□□ -1.05
TNC-213ENST00000544972 AGRNO00468 2067 aa8.46□□□□□ -1.05
TNC-213ENST00000544972 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.06
TNC-213ENST00000544972 A0A0J9YX75 114 aa8.46□□□□□ -1.06
TNC-213ENST00000544972 FAM231BA6NCW3 169 aa8.46□□□□□ -1.06
TNC-213ENST00000544972 FABP5P3A8MUU1 101 aa8.46□□□□□ -1.06
TNC-213ENST00000544972 C1orf196B1AJZ1 125 aa8.46□□□□□ -1.06
TNC-213ENST00000544972 SPINK4O60575 86 aa8.46□□□□□ -1.06
TNC-213ENST00000544972 FOXA3P55318 350 aaPredicted RBP8.46□□□□□ -1.06
TNC-213ENST00000544972 ZFP82Q8N141 532 aa8.46□□□□□ -1.06
TNC-213ENST00000544972 SPAG8Q99932 426 aaPredicted RBP8.46□□□□□ -1.06
TNC-213ENST00000544972 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.06
TNC-213ENST00000544972 TRBV7-9A0A0J9YWB2 115 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 CRISP2P16562 243 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 KIR3DS1Q14943 382 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 APRG1Q8IVJ8 170 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 LINC00482Q8N8I6 264 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 SAV1Q9H4B6 383 aaPredicted RBP8.45□□□□□ -1.06
TNC-213ENST00000544972 C11orf21Q9P2W6 132 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 TMEM189A5PLL7 270 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 DEFB131AP59861 70 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 KRTAP24-1Q3LI83 254 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 MRPL54Q6P161 138 aaKnown RBP8.45□□□□□ -1.06
TNC-213ENST00000544972 FOXI2Q6ZQN5 318 aa8.45□□□□□ -1.06
TNC-213ENST00000544972 TMSB15BA0A087X1C1 80 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 IGKV3D-20A0A0C4DH25 116 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 KLLNB2CW77 178 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 J3KRW8 73 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 SAP30O75446 220 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 IGLV1-51P01701 117 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 PF4P02776 101 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 LINC01559Q495D7 138 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 ACTL10Q5JWF8 245 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 PGLYRP4Q96LB8 373 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 MAP6D1Q9H9H5 199 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 ATRQ13535 2644 aa8.44□□□□□ -1.06
TNC-213ENST00000544972 OR4C46A6NHA9 309 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 ORM1P02763 201 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 RAB5BP61020 215 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 ZNF124Q15973 351 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 EBLN2Q6P2I7 272 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 SPATA3Q8NHX4 192 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 FRZBQ92765 325 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 ODF3Q96PU9 254 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 KNCNA6PVL3 124 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 GPX1P07203 203 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 FABP9Q0Z7S8 132 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 Q6AWC8 147 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 AMTNQ6UX39 209 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 PRIMA1Q86XR5 153 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 TRAPPC1Q9Y5R8 145 aa8.43□□□□□ -1.06
TNC-213ENST00000544972 A8MTW9 85 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST1H2BKO60814 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 DUSP14O95147 198 aaKnown RBP8.42□□□□□ -1.06
TNC-213ENST00000544972 IGKV3-20P01619 116 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST1H2BJP06899 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST1H2BOP23527 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST1H2BBP33778 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST1H2BDP58876 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST1H2BCP62807 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST2H2BEQ16778 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 ODF3L2Q3SX64 289 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.42□□□□□ -1.06
TNC-213ENST00000544972 TMEM136Q6ZRR5 245 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 ATP5L2Q7Z4Y8 100 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST1H2BHQ93079 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST1H2BNQ99877 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 HIST1H2BMQ99879 126 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 GNB1LQ9BYB4 327 aa8.42□□□□□ -1.06
TNC-213ENST00000544972 MAST4O15021 2626 aa8.41□□□□□ -1.06
TNC-213ENST00000544972 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
TNC-213ENST00000544972 SNURFLB1AK76 121 aa8.41□□□□□ -1.06
TNC-213ENST00000544972 H3BMM0 161 aa8.41□□□□□ -1.06
TNC-213ENST00000544972 TRGC1P0CF51 173 aa8.41□□□□□ -1.06
TNC-213ENST00000544972 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
TNC-213ENST00000544972 HLA-DRB4P13762 266 aa8.41□□□□□ -1.06
TNC-213ENST00000544972 RNASE4P34096 147 aaKnown RBP8.41□□□□□ -1.06
TNC-213ENST00000544972 RPS20P60866 119 aaKnown RBP8.41□□□□□ -1.06
TNC-213ENST00000544972 RASL11AQ6T310 242 aa8.41□□□□□ -1.06
TNC-213ENST00000544972 HLA-DRB4X5D2U9 266 aa8.41□□□□□ -1.06
TNC-213ENST00000544972 TRAV21A0A0B4J279 112 aa8.4□□□□□ -1.06
TNC-213ENST00000544972 GRIFINA4D1Z8 144 aa8.4□□□□□ -1.06
TNC-213ENST00000544972 ARMS2P0C7Q2 107 aa8.4□□□□□ -1.06
TNC-213ENST00000544972 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.06
TNC-213ENST00000544972 OR2K2Q8NGT1 345 aa8.4□□□□□ -1.06
TNC-213ENST00000544972 LOC105371267A0A1B0GV96 52 aa8.4□□□□□ -1.07
TNC-213ENST00000544972 RBMY1BA6NDE4 496 aaKnown RBP8.4□□□□□ -1.07
TNC-213ENST00000544972 RBMY1EA6NEQ0 496 aaKnown RBP8.4□□□□□ -1.07
TNC-213ENST00000544972 M0R2Z0 102 aa8.4□□□□□ -1.07
TNC-213ENST00000544972 ZNF324O75467 553 aaPredicted RBP8.4□□□□□ -1.07
TNC-213ENST00000544972 RBMY1DP0C7P1 496 aaKnown RBP8.4□□□□□ -1.07
TNC-213ENST00000544972 CTRLP40313 264 aa8.4□□□□□ -1.07
TNC-213ENST00000544972 LEPP41159 167 aa8.4□□□□□ -1.07
TNC-213ENST00000544972 COX19Q49B96 90 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms