RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 IGLV11-55A0A075B6I3 123 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 IGKV3-20P01619 116 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 ADORA2A-AS1P86434 159 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 IGHV1-69DA0A0B4J2H0 117 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 MYMXA0A1B0GTQ4 84 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 IGHV1-69P01742 117 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 TMEM86BQ8N661 226 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 Q8N7P7 452 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 SELENOKQ9Y6D0 94 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 KIAA2026Q5HYC2 2103 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 IGFBPL1Q8WX77 278 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 MCRIP2Q9BUT9 160 aaKnown RBP4.55□□□□□ -1.68
VPS50-220ENST00000544910 DPH3P1Q9H4G8 78 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 H3BUX3 64 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 CRPP02741 224 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 CD7P09564 240 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 ZNF407Q9C0G0 2248 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 RBAKDNA6NC62 111 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 B5MCH6 92 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 G3V318 75 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 ACYP1P07311 99 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 CRYGBP07316 175 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 FRMD6-AS1P0C7T7 363 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 C8orf86Q6ZUL3 223 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 PHLDA1Q8WV24 401 aaPredicted RBP4.54□□□□□ -1.68
VPS50-220ENST00000544910 GTSF1Q8WW33 167 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 SS18L2Q9UHA2 77 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 TRAV8-3A0A0A6YYJ7 113 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 SP5Q6BEB4 398 aaPredicted RBP4.54□□□□□ -1.68
VPS50-220ENST00000544910 Q8N8P6 123 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 SIGLEC8Q9NYZ4 499 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 PCSK5Q92824 1860 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 TRGV11A0A075B6L2 103 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 IGHG4P01861 327 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 TMEM141Q96I45 108 aa4.54□□□□□ -1.68
VPS50-220ENST00000544910 IGKV1-17P01599 117 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 HLA-DMBP28068 263 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 CFAP161Q6P656 301 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 RASL10AQ92737 203 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 PRSS22Q9GZN4 317 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 DUSP14O95147 198 aaKnown RBP4.53□□□□□ -1.68
VPS50-220ENST00000544910 SRD5A1P18405 259 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 FBXL19-AS1Q494R0 122 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 C1orf159Q96HA4 380 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 PEMTQ9UBM1 199 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 DNAJC13O75165 2243 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 C19orf71A6NCJ1 209 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 B4DSR2 109 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 G3V4G9 280 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 H3BMG7 143 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 LEPROTO15243 131 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 FSTL3O95633 263 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 PRO1854Q9UHT4 67 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 IGHV7-81A0A0B4J1V7 117 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 ODF3BA8MYP8 253 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 MRPL53Q96EL3 112 aaKnown RBP4.53□□□□□ -1.68
VPS50-220ENST00000544910 VWC2LB2RUY7 222 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 NDUFA4O00483 81 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 C12orf74Q32Q52 190 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 TOMM7Q9P0U1 55 aa4.53□□□□□ -1.68
VPS50-220ENST00000544910 URB1O60287 2271 aaKnown RBP4.52□□□□□ -1.69
VPS50-220ENST00000544910 SOCS3O14543 225 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 DYNAPQ8N1N2 210 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 DUX3Q96PT4 197 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 TECTAO75443 2155 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 DYSFO75923 2080 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 NPYP01303 97 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 EGR2P11161 476 aaPredicted RBP4.52□□□□□ -1.69
VPS50-220ENST00000544910 TDRG1Q3Y452 100 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 TIMM21Q9BVV7 248 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 RHPN1-AS1Q9BWJ2 59 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 DAZ1Q9NQZ3 744 aaKnown RBP4.52□□□□□ -1.69
VPS50-220ENST00000544910 TEX48A0A1B0GUV7 120 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 J3KT08 172 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 MSMBP08118 114 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 SMIM20Q8N5G0 67 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 ANKRD29Q8N6D5 301 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 LINC01356Q8N9X3 169 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 LY6G5BQ8NDX9 201 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 WFDC12Q8WWY7 111 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 A0A1B0GXF2 115 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 H3BUA1 57 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 C15orf53Q8NAA6 179 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 CFHR4Q92496 578 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 DOCK10Q96BY6 2186 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 RAI1Q7Z5J4 1906 aaPredicted RBP4.52□□□□□ -1.69
VPS50-220ENST00000544910 ESPL1Q14674 2120 aa4.52□□□□□ -1.69
VPS50-220ENST00000544910 LY6LH3BQJ8 138 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 SLC25A16P16260 332 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 TMEM258P61165 79 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 HEATR1Q9H583 2144 aaKnown RBP4.51□□□□□ -1.69
VPS50-220ENST00000544910 IGKV3OR2-268A0A0C4DH90 116 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 CTSGP08311 255 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 LINC01545Q5VT33 79 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 FOXI2Q6ZQN5 318 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 ATP6V0E2Q8NHE4 81 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 CITED2Q99967 270 aaPredicted RBP4.51□□□□□ -1.69
VPS50-220ENST00000544910 CHD3Q12873 2000 aaKnown RBP4.51□□□□□ -1.69
VPS50-220ENST00000544910 ZFP36P26651 326 aaKnown RBP4.51□□□□□ -1.69
VPS50-220ENST00000544910 MYCNOSP40205 109 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms