RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 IGHG2P01859 326 aa12.26□□□□□ -0.45
CHD4-210ENST00000544040 WT1-ASQ06250 92 aa12.26□□□□□ -0.45
CHD4-210ENST00000544040 BOD1L2Q8IYS8 172 aa12.26□□□□□ -0.45
CHD4-210ENST00000544040 VOPP1Q96AW1 172 aa12.26□□□□□ -0.45
CHD4-210ENST00000544040 Q96MF0 132 aa12.26□□□□□ -0.45
CHD4-210ENST00000544040 COL5A3P25940 1745 aaPredicted RBP12.26□□□□□ -0.45
CHD4-210ENST00000544040 NOP10Q9NPE3 64 aaKnown RBP12.26□□□□□ -0.45
CHD4-210ENST00000544040 CFC1BP0CG36 223 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 CFC1P0CG37 223 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 FOXL2NBQ6ZUU3 175 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 FAM231DQ6ZW35 169 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 NDUFA4O00483 81 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 WFDC9Q8NEX5 89 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 CHKB-CPT1BH3BT56 60 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 AKAP6Q13023 2319 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 SDK2Q58EX2 2172 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 FHL1Q13642 323 aa12.25□□□□□ -0.45
CHD4-210ENST00000544040 WIPF2Q8TF74 440 aaPredicted RBP12.25□□□□□ -0.45
CHD4-210ENST00000544040 RPL18AQ02543 176 aaKnown RBP12.24□□□□□ -0.45
CHD4-210ENST00000544040 FOXE3Q13461 319 aa12.24□□□□□ -0.45
CHD4-210ENST00000544040 Q9HAA7 133 aa12.24□□□□□ -0.45
CHD4-210ENST00000544040 IGKV3D-7A0A0C4DH55 119 aa12.24□□□□□ -0.45
CHD4-210ENST00000544040 SP5Q6BEB4 398 aaPredicted RBP12.24□□□□□ -0.45
CHD4-210ENST00000544040 TMEM14CQ9P0S9 112 aa12.24□□□□□ -0.45
CHD4-210ENST00000544040 A0A0G2JMZ2 1700 aa12.24□□□□□ -0.45
CHD4-210ENST00000544040 LRRC37A2A6NM11 1700 aa12.24□□□□□ -0.45
CHD4-210ENST00000544040 GATA1P15976 413 aaPredicted RBP12.24□□□□□ -0.45
CHD4-210ENST00000544040 APOC4P55056 127 aa12.24□□□□□ -0.45
CHD4-210ENST00000544040 Q6ZR03 302 aa12.24□□□□□ -0.45
CHD4-210ENST00000544040 IGHV2-70DA0A0C4DH43 119 aa12.23□□□□□ -0.45
CHD4-210ENST00000544040 IGLC7A0M8Q6 106 aa12.23□□□□□ -0.45
CHD4-210ENST00000544040 DOCK9Q9BZ29 2069 aa12.23□□□□□ -0.45
CHD4-210ENST00000544040 IGFBPL1Q8WX77 278 aa12.23□□□□□ -0.45
CHD4-210ENST00000544040 RALGAPA2Q2PPJ7 1873 aa12.23□□□□□ -0.45
CHD4-210ENST00000544040 DYNAPQ8N1N2 210 aa12.22□□□□□ -0.45
CHD4-210ENST00000544040 SPANXDQ9BXN6 97 aa12.22□□□□□ -0.45
CHD4-210ENST00000544040 SIVA1O15304 175 aa12.22□□□□□ -0.45
CHD4-210ENST00000544040 MRPL53Q96EL3 112 aaKnown RBP12.22□□□□□ -0.45
CHD4-210ENST00000544040 SCN10AQ9Y5Y9 1956 aa12.22□□□□□ -0.45
CHD4-210ENST00000544040 WNK3Q9BYP7 1800 aa12.22□□□□□ -0.45
CHD4-210ENST00000544040 C5orf38Q86SI9 138 aa12.22□□□□□ -0.45
CHD4-210ENST00000544040 PYGO2Q9BRQ0 406 aa12.22□□□□□ -0.45
CHD4-210ENST00000544040 CEP290O15078 2479 aa12.22□□□□□ -0.45
CHD4-210ENST00000544040 LTAP01374 205 aa12.21□□□□□ -0.45
CHD4-210ENST00000544040 U3KQE9 123 aa12.21□□□□□ -0.45
CHD4-210ENST00000544040 IGHV7-4-1A0A0J9YVY3 117 aa12.21□□□□□ -0.45
CHD4-210ENST00000544040 WISP1O95388 367 aa12.21□□□□□ -0.45
CHD4-210ENST00000544040 C20orf78Q9BR46 151 aa12.21□□□□□ -0.45
CHD4-210ENST00000544040 TRAV4A0A0B4J268 109 aa12.21□□□□□ -0.46
CHD4-210ENST00000544040 C10orf91Q5T1B1 145 aa12.21□□□□□ -0.46
CHD4-210ENST00000544040 CEP250Q9BV73 2442 aa12.21□□□□□ -0.46
CHD4-210ENST00000544040 KIAA2026Q5HYC2 2103 aa12.21□□□□□ -0.46
CHD4-210ENST00000544040 ZNF503-AS2A6NEH8 195 aa12.2□□□□□ -0.46
CHD4-210ENST00000544040 ZNF493Q6ZR52 646 aa12.2□□□□□ -0.46
CHD4-210ENST00000544040 SMIM20Q8N5G0 67 aa12.2□□□□□ -0.46
CHD4-210ENST00000544040 RMI2Q96E14 147 aa12.2□□□□□ -0.46
CHD4-210ENST00000544040 LOXP28300 417 aaPredicted RBP12.2□□□□□ -0.46
CHD4-210ENST00000544040 LMO1P25800 156 aa12.2□□□□□ -0.46
CHD4-210ENST00000544040 MYO7BQ6PIF6 2116 aa12.2□□□□□ -0.46
CHD4-210ENST00000544040 C17orf82Q86X59 251 aaPredicted RBP12.2□□□□□ -0.46
CHD4-210ENST00000544040 ADAMTS7Q9UKP4 1686 aa12.2□□□□□ -0.46
CHD4-210ENST00000544040 DOCK11Q5JSL3 2073 aa12.2□□□□□ -0.46
CHD4-210ENST00000544040 CFPP27918 469 aa12.2□□□□□ -0.46
CHD4-210ENST00000544040 UNQ6494/PRO21346Q6UXR6 183 aa12.19□□□□□ -0.46
CHD4-210ENST00000544040 Q6ZS92 163 aa12.19□□□□□ -0.46
CHD4-210ENST00000544040 COX7B2Q8TF08 81 aa12.19□□□□□ -0.46
CHD4-210ENST00000544040 ZNF747Q9BV97 191 aa12.19□□□□□ -0.46
CHD4-210ENST00000544040 RPL39LQ96EH5 51 aaKnown RBP12.19□□□□□ -0.46
CHD4-210ENST00000544040 IGLV10-54A0A075B6I4 117 aa12.19□□□□□ -0.46
CHD4-210ENST00000544040 SBF2Q86WG5 1849 aa12.19□□□□□ -0.46
CHD4-210ENST00000544040 IGLC1P0CG04 106 aa12.19□□□□□ -0.46
CHD4-210ENST00000544040 SLC25A29Q8N8R3 303 aa12.19□□□□□ -0.46
CHD4-210ENST00000544040 ARFGEF3Q5TH69 2177 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 BUB3O43684 328 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 TEX48A0A1B0GUV7 120 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 Q8TCH9 128 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 DKK4Q9UBT3 224 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 THSD7AQ9UPZ6 1657 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 DOCK3Q8IZD9 2030 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 CR1LQ2VPA4 569 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 NRXN2Q9P2S2 1712 aa12.18□□□□□ -0.46
CHD4-210ENST00000544040 DIDO1Q9BTC0 2240 aaKnown RBP12.17□□□□□ -0.46
CHD4-210ENST00000544040 C15orf65H3BRN8 121 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 K7EM74 188 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 IGLV3-9A0A075B6K5 115 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 A0A1B0GX51 115 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 PTPRDP23468 1912 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 APRG1Q8IVJ8 170 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 DAND5Q8N907 189 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 NCOR1P1Q9H4R4 102 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 C14orf132Q9NPU4 83 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 PRSS47A8MTI9 375 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 RHOHQ15669 191 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 MUSTN1Q8IVN3 82 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 TIMM17AQ99595 171 aa12.17□□□□□ -0.46
CHD4-210ENST00000544040 PHF3Q92576 2039 aaKnown RBP12.17□□□□□ -0.46
CHD4-210ENST00000544040 MED12Q93074 2177 aa12.16□□□□□ -0.46
CHD4-210ENST00000544040 GATA3P23771 443 aa12.16□□□□□ -0.46
CHD4-210ENST00000544040 ZFP2Q6ZN57 461 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms