RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TNCP24821 2201 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 LINC01549A6NIU2 74 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 HOXB4P17483 251 aaPredicted RBP5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 FBXL19-AS1Q494R0 122 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 UQCR10Q9UDW1 63 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 CARHSP1Q9Y2V2 147 aaKnown RBP5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 C15orf65H3BRN8 121 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 EVI2AP22794 236 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 TLN1Q9Y490 2541 aaKnown RBP5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 A0A087WWC5 75 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 TRAV8-1A0A0A6YYK1 113 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 SPINK13Q1W4C9 94 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 FAM120AOSQ5T036 256 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 C1QL4Q86Z23 238 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 OR5A1Q8NGJ0 315 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 C1orf147Q96MC9 270 aaPredicted RBP5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 C1orf194Q5T5A4 169 aa5.5□□□□□ -1.53
SRGAP1-206ENST00000543397 HBDP02042 147 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 GZMBP10144 247 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 CFPP27918 469 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 HSD52Q0P140 79 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 C9JAW5 83 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 H3BUA1 57 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 NDUFA3O95167 84 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 IGHV4-38-2P0DP08 117 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 RBX1P62877 108 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 IFITM2Q01629 132 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 DIAPH2-AS1Q14236 149 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 SEM1Q6ZVN7 128 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 TTC9CQ8N5M4 171 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 DOCK11Q5JSL3 2073 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 DENND4CQ5VZ89 1909 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 FAM231BA6NCW3 169 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 TPSG1Q9NRR2 321 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 KLF12Q9Y4X4 402 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 CCL24O00175 119 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 SH2D1AO60880 128 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 LIME1Q9H400 295 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 LAMTOR3Q9UHA4 124 aa5.49□□□□□ -1.53
SRGAP1-206ENST00000543397 TRAV1-1A0A0B4J248 108 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 FAM90A2PQ658T7 463 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 LYZL1Q6UWQ5 148 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 C14orf178Q8N769 122 aaPredicted RBP5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 OR11H6Q8NGC7 330 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 PMCHL2Q9BQD1 86 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 WT1-ASQ06250 92 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 FAM19A2Q8N3H0 131 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 TMEM86BQ8N661 226 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 RNF182Q8N6D2 247 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 NAA38Q9BRA0 125 aaKnown RBP5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 FAM236DA0A1B0GTK5 79 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 NDUFC2-KCTD14E9PQ53 114 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 FAM236CP0DP71 79 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 GP9P14770 177 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 C8orf31Q8N9H6 132 aa5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 C11orf68Q9H3H3 251 aaKnown RBP5.48□□□□□ -1.53
SRGAP1-206ENST00000543397 MYO9AB2RTY4 2548 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 FREM1Q5H8C1 2179 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 SLC25A20O43772 301 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 IGLV3-1P01715 115 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 ERCC8Q13216 396 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 SPATA25Q9BR10 227 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 DOPEY1Q5JWR5 2465 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 NCR2O95944 276 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 HOXD3P31249 432 aaPredicted RBP5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 SEC11AP67812 179 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 C11orf53Q8IXP5 236 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 IGHV7-4-1A0A0J9YVY3 117 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 LGALS1P09382 135 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 C9orf66Q5T8R8 295 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 Q6ZVH6 145 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 TMEM158Q8WZ71 300 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 GAGE12BA1L429 117 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 TRACP01848 142 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 ARMS2P0C7Q2 107 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 CFHR3Q02985 330 aa5.47□□□□□ -1.53
SRGAP1-206ENST00000543397 EP400Q96L91 3159 aa5.46□□□□□ -1.53
SRGAP1-206ENST00000543397 LHBP01229 141 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 SMIM13P0DJ93 91 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 PMAIP1Q13794 54 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 DEFB136Q30KP8 78 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 Q86TA4 180 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 PHLDA1Q8WV24 401 aaPredicted RBP5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 A8MXK9 166 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 FOXE3Q13461 319 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 LAGE3Q14657 143 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 TEX43Q6ZNM6 134 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 GNB1LQ9BYB4 327 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 SORL1Q92673 2214 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 GAGE12HA6NDE8 117 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 IFITM1P13164 125 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 PAX9P55771 341 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 LINC00158P58513 81 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 MORN3Q6PF18 240 aaPredicted RBP5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 KLK9Q9UKQ9 250 aa5.46□□□□□ -1.54
SRGAP1-206ENST00000543397 D6R8Y8 96 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 SERF1AO75920 110 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms