RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 RAB24Q969Q5 203 aa8.28□□□□□ -1.08
PTPN6-219ENST00000542848 RPUSD4Q96CM3 377 aaKnown RBP8.28□□□□□ -1.08
PTPN6-219ENST00000542848 FAM210AQ96ND0 272 aa8.28□□□□□ -1.08
PTPN6-219ENST00000542848 C20orf144Q9BQM9 153 aa8.28□□□□□ -1.08
PTPN6-219ENST00000542848 DNAJC4Q9NNZ3 241 aa8.28□□□□□ -1.08
PTPN6-219ENST00000542848 ARL2-SNX15V9GYD0 113 aa8.28□□□□□ -1.08
PTPN6-219ENST00000542848 STAG3L2P0CL84 134 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 STAG3L3P0CL85 134 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 PEA15Q15121 130 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 ZNF726P1Q15940 193 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 LCN15Q6UWW0 184 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 SLC7A5P1Q8MH63 180 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 OR10J6PQ8NGY7 276 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 SUN5Q8TC36 379 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 RNASE8Q8TDE3 154 aaKnown RBP8.27□□□□□ -1.09
PTPN6-219ENST00000542848 ZNF503Q96F45 646 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 SLC50A1Q9BRV3 221 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 Q9H8V8 135 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 NOP10Q9NPE3 64 aaKnown RBP8.27□□□□□ -1.09
PTPN6-219ENST00000542848 ZNF331Q9NQX6 463 aaPredicted RBP8.27□□□□□ -1.09
PTPN6-219ENST00000542848 TMEM167BQ9NRX6 74 aa8.27□□□□□ -1.09
PTPN6-219ENST00000542848 KRBOX1C9JBD0 128 aa8.26□□□□□ -1.09
PTPN6-219ENST00000542848 SSX7Q7RTT5 188 aa8.26□□□□□ -1.09
PTPN6-219ENST00000542848 LINC00305Q7Z4B0 112 aa8.26□□□□□ -1.09
PTPN6-219ENST00000542848 LINC00612Q8N6U2 182 aa8.26□□□□□ -1.09
PTPN6-219ENST00000542848 TXNDC17Q9BRA2 123 aa8.26□□□□□ -1.09
PTPN6-219ENST00000542848 BCL2P10415 239 aa8.25□□□□□ -1.09
PTPN6-219ENST00000542848 OR5I1Q13606 314 aa8.25□□□□□ -1.09
PTPN6-219ENST00000542848 GUK1Q16774 197 aa8.25□□□□□ -1.09
PTPN6-219ENST00000542848 GCSAMLQ5JQS6 135 aa8.25□□□□□ -1.09
PTPN6-219ENST00000542848 ZNF506Q5JVG8 444 aa8.25□□□□□ -1.09
PTPN6-219ENST00000542848 BPIFA4PQ86YQ2 179 aa8.25□□□□□ -1.09
PTPN6-219ENST00000542848 CCDC28AQ8IWP9 274 aa8.25□□□□□ -1.09
PTPN6-219ENST00000542848 RXFP4Q8TDU9 374 aa8.25□□□□□ -1.09
PTPN6-219ENST00000542848 EIF5A2Q9GZV4 153 aaKnown RBP8.25□□□□□ -1.09
PTPN6-219ENST00000542848 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
PTPN6-219ENST00000542848 TRAV26-1A0A087WT03 109 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 RBFOX3A6NFN3 312 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 H3BNG1 76 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 ARL14EPLP0DKL9 152 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 KIR3DS1Q14943 382 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 TTC32Q5I0X7 151 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 TOR2AQ5JU69 321 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 IQCF2Q8IXL9 164 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 TMEM37Q8WXS4 190 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 TREM1Q9NP99 234 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 GNG13Q9P2W3 67 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 VAX2Q9UIW0 290 aa8.24□□□□□ -1.09
PTPN6-219ENST00000542848 A0A1B0GV50 99 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 A0A1W2PPQ1 181 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 OR7C2O60412 319 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 PRB4P10163 310 aaPredicted RBP8.23□□□□□ -1.09
PTPN6-219ENST00000542848 BTF3P20290 206 aaKnown RBP8.23□□□□□ -1.09
PTPN6-219ENST00000542848 GCHFRP30047 84 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 FGF8P55075 233 aaPredicted RBP8.23□□□□□ -1.09
PTPN6-219ENST00000542848 UBE2L3P68036 154 aaKnown RBP8.23□□□□□ -1.09
PTPN6-219ENST00000542848 GFI1BQ5VTD9 330 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 MIR17HGQ75NE6 70 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 MAPKAPK5-AS1Q8N8E1 139 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 TCEAL7Q9BRU2 100 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 UPK3BQ9BT76 320 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 Q9H3A6 140 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 TMEM14CQ9P0S9 112 aa8.23□□□□□ -1.09
PTPN6-219ENST00000542848 SNURFLB1AK76 121 aa8.22□□□□□ -1.09
PTPN6-219ENST00000542848 PRAC2D3DTV9 90 aa8.22□□□□□ -1.09
PTPN6-219ENST00000542848 SNRPCP09234 159 aaKnown RBP8.22□□□□□ -1.09
PTPN6-219ENST00000542848 IGLC2P0DOY2 106 aa8.22□□□□□ -1.09
PTPN6-219ENST00000542848 MEF2BQ02080 365 aaPredicted RBP8.22□□□□□ -1.09
PTPN6-219ENST00000542848 ESRGQ1W209 222 aa8.22□□□□□ -1.09
PTPN6-219ENST00000542848 ODF3Q96PU9 254 aa8.22□□□□□ -1.09
PTPN6-219ENST00000542848 NKX6-2Q9C056 277 aaPredicted RBP8.22□□□□□ -1.09
PTPN6-219ENST00000542848 A0A0J9YY99 117 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 GAGE12BA1L429 117 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 TMEM218A2RU14 115 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 F6UZH7 168 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 TMEM250H0YL14 139 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 SLC17A3O00476 420 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 HMGB3O15347 200 aaKnown RBP8.21□□□□□ -1.1
PTPN6-219ENST00000542848 PDE6DO43924 150 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 GAGE7O76087 117 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 GAGE12FP0CL80 117 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 GAGE12GP0CL81 117 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 GAGE12IP0CL82 117 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 CT45A10P0DMU9 189 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 HOXA5P20719 270 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 LEPP41159 167 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 CCL20P78556 96 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 DAZ2Q13117 558 aaKnown RBP8.21□□□□□ -1.1
PTPN6-219ENST00000542848 SPATA12Q7Z6I5 190 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 PYGO2Q9BRQ0 406 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 PAXXQ9BUH6 204 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 SLC25A2Q9BXI2 301 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 OR51M1Q9H341 326 aa8.21□□□□□ -1.1
PTPN6-219ENST00000542848 TRAV12-3A0A0B4J271 114 aa8.2□□□□□ -1.1
PTPN6-219ENST00000542848 A0A1W2PRE2 83 aa8.2□□□□□ -1.1
PTPN6-219ENST00000542848 NPIPB6E9PJ23 425 aa8.2□□□□□ -1.1
PTPN6-219ENST00000542848 H3BQ15 152 aa8.2□□□□□ -1.1
PTPN6-219ENST00000542848 H3BTX0 84 aa8.2□□□□□ -1.1
PTPN6-219ENST00000542848 ICAM4Q14773 271 aa8.2□□□□□ -1.1
PTPN6-219ENST00000542848 MORN5Q5VZ52 161 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms