RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 DNAH17Q9UFH2 4485 aa12.18□□□□□ -0.46
LTBR-210ENST00000542830 TRGV1A0A0A0MS02 117 aa12.18□□□□□ -0.46
LTBR-210ENST00000542830 PGPA6NDG6 321 aa12.18□□□□□ -0.46
LTBR-210ENST00000542830 HOXA5P20719 270 aa12.18□□□□□ -0.46
LTBR-210ENST00000542830 HYLS1Q96M11 299 aa12.18□□□□□ -0.46
LTBR-210ENST00000542830 TMPRSS5Q9H3S3 457 aa12.18□□□□□ -0.46
LTBR-210ENST00000542830 A0A0J9YY99 117 aa12.17□□□□□ -0.46
LTBR-210ENST00000542830 SPINK4O60575 86 aa12.17□□□□□ -0.46
LTBR-210ENST00000542830 EIF3GO75821 320 aaKnown RBP eCLIP12.17□□□□□ -0.46
LTBR-210ENST00000542830 MBP02144 154 aa12.17□□□□□ -0.46
LTBR-210ENST00000542830 CDC34P49427 236 aaPredicted RBP12.17□□□□□ -0.46
LTBR-210ENST00000542830 C1orf134Q5TEV5 83 aa12.17□□□□□ -0.46
LTBR-210ENST00000542830 HSD17B11Q8NBQ5 300 aa12.17□□□□□ -0.46
LTBR-210ENST00000542830 INO80EQ8NBZ0 244 aaPredicted RBP12.17□□□□□ -0.46
LTBR-210ENST00000542830 ZNRF2Q8NHG8 242 aa12.17□□□□□ -0.46
LTBR-210ENST00000542830 LINC00588Q9Y4M8 146 aa12.17□□□□□ -0.46
LTBR-210ENST00000542830 KLF12Q9Y4X4 402 aa12.17□□□□□ -0.46
LTBR-210ENST00000542830 SERF2P84101 59 aa12.16□□□□□ -0.46
LTBR-210ENST00000542830 ZNF415Q09FC8 603 aa12.16□□□□□ -0.46
LTBR-210ENST00000542830 Q6AWC8 147 aa12.16□□□□□ -0.46
LTBR-210ENST00000542830 SSX7Q7RTT5 188 aa12.16□□□□□ -0.46
LTBR-210ENST00000542830 A0A1B0GVY2 172 aa12.15□□□□□ -0.46
LTBR-210ENST00000542830 STAG3L2P0CL84 134 aa12.15□□□□□ -0.46
LTBR-210ENST00000542830 STAG3L3P0CL85 134 aa12.15□□□□□ -0.46
LTBR-210ENST00000542830 ATP6V0CP27449 155 aa12.15□□□□□ -0.46
LTBR-210ENST00000542830 TP53TG3Q9ULZ0 132 aa12.15□□□□□ -0.46
LTBR-210ENST00000542830 RPH3ALQ9UNE2 315 aa12.15□□□□□ -0.46
LTBR-210ENST00000542830 NBDYA0A0U1RRE5 68 aa12.14□□□□□ -0.47
LTBR-210ENST00000542830 HMGB3O15347 200 aaKnown RBP12.14□□□□□ -0.47
LTBR-210ENST00000542830 ARL14EPLP0DKL9 152 aa12.14□□□□□ -0.47
LTBR-210ENST00000542830 FAM159AQ6UWV7 190 aa12.14□□□□□ -0.47
LTBR-210ENST00000542830 Q6ZQT7 251 aa12.14□□□□□ -0.47
LTBR-210ENST00000542830 ST6GAL2Q96JF0 529 aa12.14□□□□□ -0.47
LTBR-210ENST00000542830 MUC4Q99102 2169 aa12.13□□□□□ -0.47
LTBR-210ENST00000542830 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
LTBR-210ENST00000542830 SERTM2A0A1B0GWG4 89 aa12.13□□□□□ -0.47
LTBR-210ENST00000542830 RGS21Q2M5E4 152 aa12.13□□□□□ -0.47
LTBR-210ENST00000542830 Q5BKY6 102 aa12.13□□□□□ -0.47
LTBR-210ENST00000542830 MUC21Q5SSG8 566 aa12.13□□□□□ -0.47
LTBR-210ENST00000542830 GOLT1AQ6ZVE7 132 aa12.13□□□□□ -0.47
LTBR-210ENST00000542830 RAB24Q969Q5 203 aa12.13□□□□□ -0.47
LTBR-210ENST00000542830 FXYD6-FXYD2A0A087WZ82 144 aa12.12□□□□□ -0.47
LTBR-210ENST00000542830 BORCS7-ASMTA0A0B4J1R7 106 aa12.12□□□□□ -0.47
LTBR-210ENST00000542830 SLAQ13239 276 aa12.12□□□□□ -0.47
LTBR-210ENST00000542830 UPK3BQ9BT76 320 aa12.12□□□□□ -0.47
LTBR-210ENST00000542830 ACTR3CQ9C0K3 210 aaPredicted RBP12.12□□□□□ -0.47
LTBR-210ENST00000542830 MRPL16Q9NX20 251 aaKnown RBP12.12□□□□□ -0.47
LTBR-210ENST00000542830 TNFSF18Q9UNG2 199 aa12.12□□□□□ -0.47
LTBR-210ENST00000542830 TRAV21A0A0B4J279 112 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 RNF222A6NCQ9 220 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 GCHFRP30047 84 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 OR2T35Q8NGX2 323 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 SUN5Q8TC36 379 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 VSIG2Q96IQ7 327 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 SPXQ9BT56 116 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 Q9H8V8 135 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 TMEM167BQ9NRX6 74 aa12.11□□□□□ -0.47
LTBR-210ENST00000542830 A0A096LPF7 62 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 CXorf1O96002 111 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 GNG5P63218 68 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 TMEM183BQ1AE95 376 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 ESRGQ1W209 222 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 TTC32Q5I0X7 151 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 TMEM183AQ8IXX5 376 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 C6orf223Q8N319 242 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 C5orf17Q8NAS9 161 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 NDFIP1Q9BT67 221 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 SH3BGRL3Q9H299 93 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 TREM1Q9NP99 234 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 MDFICQ9P1T7 246 aa12.1□□□□□ -0.47
LTBR-210ENST00000542830 MRPS16Q9Y3D3 137 aaKnown RBP12.1□□□□□ -0.47
LTBR-210ENST00000542830 K7EQM0 130 aa12.09□□□□□ -0.47
LTBR-210ENST00000542830 PAX4O43316 350 aa12.09□□□□□ -0.47
LTBR-210ENST00000542830 RPL7L1Q6DKI1 246 aaKnown RBP12.09□□□□□ -0.47
LTBR-210ENST00000542830 PRO0255Q9UI72 69 aa12.09□□□□□ -0.47
LTBR-210ENST00000542830 NAGKQ9UJ70 344 aa12.09□□□□□ -0.47
LTBR-210ENST00000542830 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.48
LTBR-210ENST00000542830 IGHV3-53P01767 116 aa12.08□□□□□ -0.48
LTBR-210ENST00000542830 TCRAP04437 139 aa12.08□□□□□ -0.48
LTBR-210ENST00000542830 RASL10AQ92737 203 aa12.08□□□□□ -0.48
LTBR-210ENST00000542830 ICOSQ9Y6W8 199 aa12.08□□□□□ -0.48
LTBR-210ENST00000542830 F6UZH7 168 aa12.07□□□□□ -0.48
LTBR-210ENST00000542830 TVP23CQ96ET8 276 aa12.07□□□□□ -0.48
LTBR-210ENST00000542830 KCNS1Q96KK3 526 aa12.07□□□□□ -0.48
LTBR-210ENST00000542830 HHLA3Q9XRX5 114 aa12.07□□□□□ -0.48
LTBR-210ENST00000542830 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
LTBR-210ENST00000542830 A0A1W2PPQ1 181 aa12.06□□□□□ -0.48
LTBR-210ENST00000542830 FBLL1A6NHQ2 334 aaKnown RBP12.06□□□□□ -0.48
LTBR-210ENST00000542830 TAAR5O14804 337 aa12.06□□□□□ -0.48
LTBR-210ENST00000542830 CRYBA4P53673 196 aa12.06□□□□□ -0.48
LTBR-210ENST00000542830 SUMO1P63165 101 aaKnown RBP12.06□□□□□ -0.48
LTBR-210ENST00000542830 FHL2Q14192 279 aa12.06□□□□□ -0.48
LTBR-210ENST00000542830 IQCF2Q8IXL9 164 aa12.06□□□□□ -0.48
LTBR-210ENST00000542830 SDF2L1Q9HCN8 221 aa12.06□□□□□ -0.48
LTBR-210ENST00000542830 EPDR1Q9UM22 224 aa12.06□□□□□ -0.48
LTBR-210ENST00000542830 TRGV4A0A0C4DH28 118 aa12.05□□□□□ -0.48
LTBR-210ENST00000542830 CTXND1A0A1B0GTU2 59 aa12.05□□□□□ -0.48
LTBR-210ENST00000542830 A0A1W2PRE2 83 aa12.05□□□□□ -0.48
LTBR-210ENST00000542830 CYB561D1Q8N8Q1 229 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms