RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 SLC45A2Q9UMX9 530 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 U3KQ87 197 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 IGLV10-54A0A075B6I4 117 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 A0A087X0K7 114 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 A0A1B0GVG6 124 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 TRBV6-4A0A1B0GX49 114 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 H3BRN7 92 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 TMEM127O75204 238 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 EIF3GO75821 320 aaKnown RBP eCLIP1.89□□□□□ -2.11
CHD4-209ENST00000542717 CDS2O95674 445 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 SLPIP03973 132 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 SNRPCP09234 159 aaKnown RBP1.89□□□□□ -2.11
CHD4-209ENST00000542717 KRTAP1-4P0C5Y4 121 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 ANXA7P20073 488 aaKnown RBP1.89□□□□□ -2.11
CHD4-209ENST00000542717 SDC2P34741 201 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 PRSS3P35030 304 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 RPS10P46783 165 aaKnown RBP1.89□□□□□ -2.11
CHD4-209ENST00000542717 ATP5IP56385 69 aaPredicted RBP1.89□□□□□ -2.11
CHD4-209ENST00000542717 MXD1Q05195 221 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 OPCMLQ14982 345 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 MIAQ16674 131 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 KRTAP19-2Q3LHN2 52 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 ZNF876PQ49A33 203 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 MUC21Q5SSG8 566 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 GGNBP1Q5YKI7 109 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 CLPSL2Q6UWE3 100 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 LHFPL1Q86WI0 220 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 CYB561D1Q8N8Q1 229 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 GPX8Q8TED1 209 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 S100A16Q96FQ6 103 aaKnown RBP1.89□□□□□ -2.11
CHD4-209ENST00000542717 ODF3Q96PU9 254 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 SLC50A1Q9BRV3 221 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 SPXQ9BT56 116 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 CHCHD7Q9BUK0 85 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 SAMD10Q9BYL1 202 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 GFRA4Q9GZZ7 299 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 VCXQ9H320 206 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 COPZ2Q9P299 210 aa1.89□□□□□ -2.11
CHD4-209ENST00000542717 CARHSP1Q9Y2V2 147 aaKnown RBP1.89□□□□□ -2.11
CHD4-209ENST00000542717 A0A087WWL8 130 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 A0A087WZ39 114 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 PRAC2D3DTV9 90 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 ANKRD65E5RJM6 399 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 M0R2P5 195 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 HOXB5P09067 269 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 OR4E1P0C645 316 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 SULT1A3P0DMM9 295 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 SULT1A4P0DMN0 295 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 CXCL2P19875 107 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 RAP2BP61225 183 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 BAK1Q16611 211 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 UBE2NLQ5JXB2 153 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 GPR107Q5VW38 600 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 TMEM268Q5VZI3 342 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 TMEM182Q6ZP80 229 aaPredicted RBP1.88□□□□□ -2.11
CHD4-209ENST00000542717 SELENOHQ8IZQ5 122 aaKnown RBP1.88□□□□□ -2.11
CHD4-209ENST00000542717 OR1S1Q8NH92 325 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 ZFAND1Q8TCF1 268 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 MARCH1Q8TCQ1 289 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 DTD1Q8TEA8 209 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 GLYATL2Q8WU03 294 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 OPRPNQ99935 248 aaPredicted RBP1.88□□□□□ -2.11
CHD4-209ENST00000542717 SHANK2-AS3Q9BTD1 123 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 SRRQ9GZT4 340 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 HSPB7Q9UBY9 170 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 BLOC1S6Q9UL45 172 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 PKIGQ9Y2B9 76 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
CHD4-209ENST00000542717 TRGV11A0A075B6L2 103 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 PMS2P5A8MQ11 134 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 KLLNB2CW77 178 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 H3BTX0 84 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 MRPS12O15235 138 aaKnown RBP1.87□□□□□ -2.11
CHD4-209ENST00000542717 HYPMO75409 117 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 TSHBP01222 138 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 OR5G3P0C626 314 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 TBPP20226 339 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 AMTP48728 403 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 RAB5CP51148 216 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 AQP4P55087 323 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 PLP1P60201 277 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 UBE2MP61081 183 aaKnown RBP1.87□□□□□ -2.11
CHD4-209ENST00000542717 RAB11AP62491 216 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 SMCO1Q147U7 214 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 ZNF674Q2M3X9 581 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 RNASE10Q5GAN6 216 aaKnown RBP1.87□□□□□ -2.11
CHD4-209ENST00000542717 EIF5AL1Q6IS14 154 aaKnown RBP1.87□□□□□ -2.11
CHD4-209ENST00000542717 FAM159AQ6UWV7 190 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 LCN15Q6UWW0 184 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 ACOT7LQ6ZUV0 252 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 S100A7AQ86SG5 101 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 ZNF546Q86UE3 836 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 SAMD12Q8N8I0 201 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 OR13C8Q8NGS7 320 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 TERB2Q8NHR7 220 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 RBKSQ9H477 322 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 NAA60Q9H7X0 242 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 ZNF331Q9NQX6 463 aaPredicted RBP1.87□□□□□ -2.11
CHD4-209ENST00000542717 SLC39A9Q9NUM3 307 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 NAGKQ9UJ70 344 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms