RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 UBE2WQ96B02 151 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 C9orf85Q96MD7 179 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 PRRG4Q9BZD6 226 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 JPT2Q9H910 190 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 AMMECR1Q9Y4X0 333 aaPredicted RBP4.47□□□□□ -1.69
XRCC4-206ENST00000542685 DNAH12Q6ZR08 3092 aa4.47□□□□□ -1.69
XRCC4-206ENST00000542685 TANC2Q9HCD6 1990 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 IGHV1OR21-1A0A087WYE8 117 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 IGKV1-6A0A0C4DH72 117 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 TRBV10-2A0A0K0K1G8 114 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 FAM236AA0A1B0GUQ0 79 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 FAM236BA0A1B0GV22 79 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 C5orf63A6NC05 138 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 SPRY1O43609 319 aaPredicted RBP4.46□□□□□ -1.7
XRCC4-206ENST00000542685 ZFAND5O76080 213 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 LTAP01374 205 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 CA6P23280 308 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 ATXN8Q156A1 80 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 TMEM30BQ3MIR4 351 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 ZNF542PQ5EBM4 170 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 SIGLEC15Q6ZMC9 328 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 LINC00643Q86TS7 51 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 RPS19BP1Q86WX3 136 aaKnown RBP4.46□□□□□ -1.7
XRCC4-206ENST00000542685 C11orf53Q8IXP5 236 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 Q8IYB0 196 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 ORMDL3Q8N138 153 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 TMEM86BQ8N661 226 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 SLC25A39Q9BZJ4 359 aaPredicted RBP4.46□□□□□ -1.7
XRCC4-206ENST00000542685 NXT2Q9NPJ8 142 aaKnown RBP4.46□□□□□ -1.7
XRCC4-206ENST00000542685 TP53TG1Q9Y2A0 90 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 ZNF256Q9Y2P7 627 aaPredicted RBP4.46□□□□□ -1.7
XRCC4-206ENST00000542685 RP1P56715 2156 aa4.46□□□□□ -1.7
XRCC4-206ENST00000542685 TRAV12-1A0A0B4J245 112 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 TRAV17A0A0B4J275 112 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 LOC107984156A0A0G2JMH3 177 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 WI2-2373I1.2A0A1W2PRP0 233 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 RBAKDNA6NC62 111 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 OOSP1A8MZH6 123 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 NBR2O15453 112 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 NDUFC2O95298 119 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 TCL1BO95988 128 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 ZNF883P0CG24 379 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 COL8A2P25067 703 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 FCER1GP30273 86 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 CCL11P51671 97 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 HIST1H4AP62805 103 aaKnown RBP4.45□□□□□ -1.7
XRCC4-206ENST00000542685 EIF4EBP1Q13541 118 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-206ENST00000542685 HES3Q5TGS1 186 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 Q6ZQT7 251 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 AAED1Q7RTV5 226 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 ARL17AQ8IVW1 177 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-206ENST00000542685 ZNF714Q96N38 554 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 NABP2Q9BQ15 211 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 CHCHD5Q9BSY4 110 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 DEPPQ9NTK1 212 aa4.45□□□□□ -1.7
XRCC4-206ENST00000542685 KLF13Q9Y2Y9 288 aaPredicted RBP4.45□□□□□ -1.7
XRCC4-206ENST00000542685 CENPFP49454 3210 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 ALPK2Q86TB3 2170 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 IGKV2D-26A0A0A0MRZ7 120 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 TRAV13-1A0A0B4J241 112 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 LINC01549A6NIU2 74 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 EPM2AB3EWF7 344 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 LY6LH3BQJ8 138 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 K7EM74 188 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 LIFP15018 202 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 SLC25A16P16260 332 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 ZNF32P17041 273 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 DUTP33316 252 aaKnown RBP4.44□□□□□ -1.7
XRCC4-206ENST00000542685 MYCNOSP40205 109 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 MRPS36P82909 103 aaKnown RBP4.44□□□□□ -1.7
XRCC4-206ENST00000542685 IL11RAQ14626 422 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 ZC2HC1BQ5TFG8 222 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 C1orf195Q5TG92 126 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 MIR17HGQ75NE6 70 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 NDUFA11Q86Y39 141 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 LITAFQ99732 161 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 SHANK2-AS3Q9BTD1 123 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 RTL8AQ9BWD3 113 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 LAMTOR3Q9UHA4 124 aa4.44□□□□□ -1.7
XRCC4-206ENST00000542685 IGKV3D-15A0A087WSY6 115 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 A0A0B4J2C4 111 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 J3QQQ9 107 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 ZNHIT1O43257 154 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 COX6A1P12074 109 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 DEFA4P12838 97 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 PFN2P35080 140 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 CCL8P80075 99 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 ZNF876PQ49A33 203 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 HRCT1Q6UXD1 115 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 ZNF497Q6ZNH5 498 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 SDIM1Q6ZPB5 146 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 C5orf38Q86SI9 138 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 C1orf158Q8N1D5 194 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 PGLYRP4Q96LB8 373 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 AGPAT4-IT1Q9H0P7 198 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 DYNLRB1Q9NP97 96 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 CALYQ9NYX4 217 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 PYGO1Q9Y3Y4 419 aa4.43□□□□□ -1.7
XRCC4-206ENST00000542685 TRAV12-2A0A075B6T6 113 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms