RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 HIST1H1EP10412 219 aaKnown RBP3.24□□□□□ -1.89
MDM2-228ENST00000542502 RPL35AP18077 110 aaKnown RBP3.24□□□□□ -1.89
MDM2-228ENST00000542502 TAGLN2P37802 199 aaKnown RBP3.24□□□□□ -1.89
MDM2-228ENST00000542502 FAM78BQ5VT40 261 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 MIC13Q5XKP0 118 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 EBLN2Q6P2I7 272 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 MORN3Q6PF18 240 aaPredicted RBP3.24□□□□□ -1.89
MDM2-228ENST00000542502 ADAMTSL5Q6ZMM2 481 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 BAP18Q8IXM2 172 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 KIR2DL5AQ8N109 375 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 OR10G4Q8NGN3 311 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 OR10G9Q8NGN4 311 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 OR10G7Q8NGN6 311 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 KIR2DL5BQ8NHK3 375 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 SUN5Q8TC36 379 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 RXFP4Q8TDU9 374 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 MRPL53Q96EL3 112 aaKnown RBP3.24□□□□□ -1.89
MDM2-228ENST00000542502 TCEAL7Q9BRU2 100 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 RSG1Q9BU20 258 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 ZNF471Q9BX82 626 aaPredicted RBP3.24□□□□□ -1.89
MDM2-228ENST00000542502 SMIM3Q9BZL3 60 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 SLC25A22Q9H936 323 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 TMEM167BQ9NRX6 74 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 FUT9Q9Y231 359 aa3.24□□□□□ -1.89
MDM2-228ENST00000542502 STAB2Q8WWQ8 2551 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 AGRNO00468 2067 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 IGHV3OR16-8A0A075B7F1 116 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 SERTM2A0A1B0GWG4 89 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 K7EQM0 130 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 OR7C2O60412 319 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 HBE1P02100 147 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 NBEAP1P0C6P0 100 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 GATA2P23769 480 aaPredicted RBP3.23□□□□□ -1.89
MDM2-228ENST00000542502 ATP6V0CP27449 155 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 TSPOP30536 169 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 CSN1S1P47710 185 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 CDC34P49427 236 aaPredicted RBP3.23□□□□□ -1.89
MDM2-228ENST00000542502 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 DEFA6Q01524 100 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 Q5BKY6 102 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 DEFB121Q5J5C9 76 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 RPL7L1Q6DKI1 246 aaKnown RBP3.23□□□□□ -1.89
MDM2-228ENST00000542502 PATE2Q6UY27 113 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 FOXI2Q6ZQN5 318 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 TMUB2Q71RG4 321 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 STHQ8IWL8 128 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 HSD17B11Q8NBQ5 300 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 MRAPQ8TCY5 172 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 DCANP1Q8TF63 244 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 TMEM37Q8WXS4 190 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 TXNDC17Q9BRA2 123 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 PAXXQ9BUH6 204 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 OR51M1Q9H341 326 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 DOK5Q9P104 306 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 TP53TG1Q9Y2A0 90 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 PYGO1Q9Y3Y4 419 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 ARL2-SNX15V9GYD0 113 aa3.23□□□□□ -1.89
MDM2-228ENST00000542502 TRBV19A0A075B6N1 114 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 IGHV3OR16-13A0A075B7E8 117 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 A0A087WZ39 114 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 LOC102724200A0A096LPH7 203 aaPredicted RBP3.22□□□□□ -1.89
MDM2-228ENST00000542502 IGHV3-49A0A0A0MS15 119 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 IGHV3-74A0A0B4J1X5 117 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 TRBV7-9A0A0J9YWB2 115 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 CTXND1A0A1B0GTU2 59 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 RBAKDNA6NC62 111 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 F6UZH7 168 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 G3V3Q6 166 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 H7C423 109 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 SLC25A5P05141 298 aaKnown RBP3.22□□□□□ -1.89
MDM2-228ENST00000542502 NMBP08949 121 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 IGLC2P0DOY2 106 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 XGP55808 180 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 UBE2L3P68036 154 aaKnown RBP3.22□□□□□ -1.89
MDM2-228ENST00000542502 PSG3Q16557 428 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 ADAMTSL4-AS1Q5T5F5 129 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 LEMD1Q68G75 181 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 OR10J6PQ8NGY7 276 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 CMTM2Q8TAZ6 248 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 C2orf48Q96LS8 159 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 LINC00477Q96M19 166 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 FAM218AQ96MZ4 157 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 VGLL1Q99990 258 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 B9D2Q9BPU9 175 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 SCRT1Q9BWW7 348 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 WFDC1Q9HC57 220 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 ZNF331Q9NQX6 463 aaPredicted RBP3.22□□□□□ -1.89
MDM2-228ENST00000542502 LENEPQ9Y5L5 61 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 TENM3Q9P273 2699 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
MDM2-228ENST00000542502 IGKV3-7A0A075B6H7 116 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 TRAV1-1A0A0B4J248 108 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 IGHV3-66A0A0C4DH42 116 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 A0A1W2PRE2 83 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 IZUMO1RA6ND01 250 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 SMLR1H3BR10 107 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 IFNA1P01562 189 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 IFNA7P01567 189 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 S100A9P06702 114 aaKnown RBP3.21□□□□□ -1.9
MDM2-228ENST00000542502 ZNF688P0C7X2 276 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms