RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 A0A096LPF7 62 aa10.81□□□□□ -0.68
VPS33A-206ENST00000542310 SSNA1O43805 119 aa10.81□□□□□ -0.68
VPS33A-206ENST00000542310 IFNA5P01569 189 aa10.81□□□□□ -0.68
VPS33A-206ENST00000542310 ZNF415Q09FC8 603 aa10.81□□□□□ -0.68
VPS33A-206ENST00000542310 ESRGQ1W209 222 aa10.81□□□□□ -0.68
VPS33A-206ENST00000542310 FFAR4Q5NUL3 377 aa10.81□□□□□ -0.68
VPS33A-206ENST00000542310 VSIG2Q96IQ7 327 aa10.81□□□□□ -0.68
VPS33A-206ENST00000542310 KLF12Q9Y4X4 402 aa10.81□□□□□ -0.68
VPS33A-206ENST00000542310 RPL12P30050 165 aaKnown RBP10.8□□□□□ -0.68
VPS33A-206ENST00000542310 ZNF266Q14584 549 aa10.8□□□□□ -0.68
VPS33A-206ENST00000542310 Q8TAT8 98 aa10.8□□□□□ -0.68
VPS33A-206ENST00000542310 SCGB1C1Q8TD33 95 aa10.8□□□□□ -0.68
VPS33A-206ENST00000542310 TMED6Q8WW62 240 aa10.8□□□□□ -0.68
VPS33A-206ENST00000542310 KRTAP1-5Q9BYS1 174 aa10.8□□□□□ -0.68
VPS33A-206ENST00000542310 C16orf90A8MZG2 172 aa10.79□□□□□ -0.68
VPS33A-206ENST00000542310 SLAQ13239 276 aa10.79□□□□□ -0.68
VPS33A-206ENST00000542310 Q6AWC8 147 aa10.79□□□□□ -0.68
VPS33A-206ENST00000542310 MBD2Q9UBB5 411 aa10.79□□□□□ -0.68
VPS33A-206ENST00000542310 DIRC3C9JPN6 131 aa10.78□□□□□ -0.68
VPS33A-206ENST00000542310 RANP62826 216 aaKnown RBP10.78□□□□□ -0.68
VPS33A-206ENST00000542310 PQLC2Q6ZP29 291 aa10.78□□□□□ -0.68
VPS33A-206ENST00000542310 ARL6IP6Q8N6S5 226 aa10.78□□□□□ -0.68
VPS33A-206ENST00000542310 TP53TG3Q9ULZ0 132 aa10.78□□□□□ -0.68
VPS33A-206ENST00000542310 ICOSQ9Y6W8 199 aa10.78□□□□□ -0.68
VPS33A-206ENST00000542310 LRP1BQ9NZR2 4599 aa10.77□□□□□ -0.68
VPS33A-206ENST00000542310 CDK2AP2O75956 126 aa10.77□□□□□ -0.69
VPS33A-206ENST00000542310 FAM74A1Q5RGS3 127 aa10.77□□□□□ -0.69
VPS33A-206ENST00000542310 OTORQ9NRC9 128 aa10.77□□□□□ -0.69
VPS33A-206ENST00000542310 MRPL16Q9NX20 251 aaKnown RBP10.77□□□□□ -0.69
VPS33A-206ENST00000542310 PRO0255Q9UI72 69 aa10.77□□□□□ -0.69
VPS33A-206ENST00000542310 HSPG2P98160 4391 aa10.77□□□□□ -0.69
VPS33A-206ENST00000542310 TRGV11A0A075B6L2 103 aa10.76□□□□□ -0.69
VPS33A-206ENST00000542310 PAX4O43316 350 aa10.76□□□□□ -0.69
VPS33A-206ENST00000542310 ACOT6Q3I5F7 207 aaPredicted RBP10.76□□□□□ -0.69
VPS33A-206ENST00000542310 Q6ZQT7 251 aa10.76□□□□□ -0.69
VPS33A-206ENST00000542310 SMIM3Q9BZL3 60 aa10.76□□□□□ -0.69
VPS33A-206ENST00000542310 CRYBA4P53673 196 aa10.75□□□□□ -0.69
VPS33A-206ENST00000542310 TDRG1Q3Y452 100 aa10.75□□□□□ -0.69
VPS33A-206ENST00000542310 CMTM2Q8TAZ6 248 aa10.75□□□□□ -0.69
VPS33A-206ENST00000542310 SPXQ9BT56 116 aa10.75□□□□□ -0.69
VPS33A-206ENST00000542310 FAM159AQ6UWV7 190 aa10.74□□□□□ -0.69
VPS33A-206ENST00000542310 IQCF2Q8IXL9 164 aa10.74□□□□□ -0.69
VPS33A-206ENST00000542310 OR10G4Q8NGN3 311 aa10.74□□□□□ -0.69
VPS33A-206ENST00000542310 RASL10AQ92737 203 aa10.74□□□□□ -0.69
VPS33A-206ENST00000542310 A0A1W2PPV4 95 aa10.73□□□□□ -0.69
VPS33A-206ENST00000542310 SIVA1O15304 175 aa10.73□□□□□ -0.69
VPS33A-206ENST00000542310 IGHV3-53P01767 116 aa10.73□□□□□ -0.69
VPS33A-206ENST00000542310 FHL2Q14192 279 aa10.73□□□□□ -0.69
VPS33A-206ENST00000542310 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
VPS33A-206ENST00000542310 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
VPS33A-206ENST00000542310 WFDC1Q9HC57 220 aa10.73□□□□□ -0.69
VPS33A-206ENST00000542310 HHLA3Q9XRX5 114 aa10.73□□□□□ -0.69
VPS33A-206ENST00000542310 SERTM2A0A1B0GWG4 89 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 NXPH4O95158 308 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 LINC00315P59091 139 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 TMEM183BQ1AE95 376 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 SPATA12Q7Z6I5 190 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 OR2G3Q8NGZ4 309 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 HYLS1Q96M11 299 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 BATF3Q9NR55 127 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 MDFICQ9P1T7 246 aa10.72□□□□□ -0.69
VPS33A-206ENST00000542310 ABCA13Q86UQ4 5058 aa10.71□□□□□ -0.69
VPS33A-206ENST00000542310 TRAV21A0A0B4J279 112 aa10.71□□□□□ -0.69
VPS33A-206ENST00000542310 TRGV4A0A0C4DH28 118 aa10.71□□□□□ -0.69
VPS33A-206ENST00000542310 PGPA6NDG6 321 aa10.71□□□□□ -0.69
VPS33A-206ENST00000542310 RAB2AP61019 212 aa10.71□□□□□ -0.69
VPS33A-206ENST00000542310 Q6ZRN7 208 aaPredicted RBP10.71□□□□□ -0.69
VPS33A-206ENST00000542310 GOLT1AQ6ZVE7 132 aa10.71□□□□□ -0.69
VPS33A-206ENST00000542310 NEGR1Q7Z3B1 354 aa10.71□□□□□ -0.69
VPS33A-206ENST00000542310 C8orf49Q96NF6 230 aa10.71□□□□□ -0.69
VPS33A-206ENST00000542310 PSMG3Q9BT73 122 aaPredicted RBP10.71□□□□□ -0.69
VPS33A-206ENST00000542310 ALG5Q9Y673 324 aa10.71□□□□□ -0.69
VPS33A-206ENST00000542310 TRAV4A0A0B4J268 109 aa10.7□□□□□ -0.7
VPS33A-206ENST00000542310 K7EP13 123 aa10.7□□□□□ -0.7
VPS33A-206ENST00000542310 PTTG1O95997 202 aa10.7□□□□□ -0.7
VPS33A-206ENST00000542310 ORM1P02763 201 aa10.7□□□□□ -0.7
VPS33A-206ENST00000542310 CDC34P49427 236 aaPredicted RBP10.7□□□□□ -0.7
VPS33A-206ENST00000542310 OR10G9Q8NGN4 311 aa10.7□□□□□ -0.7
VPS33A-206ENST00000542310 OR10G7Q8NGN6 311 aa10.7□□□□□ -0.7
VPS33A-206ENST00000542310 PCNPQ8WW12 178 aaKnown RBP10.7□□□□□ -0.7
VPS33A-206ENST00000542310 AQP10Q96PS8 301 aa10.7□□□□□ -0.7
VPS33A-206ENST00000542310 RPH3ALQ9UNE2 315 aa10.7□□□□□ -0.7
VPS33A-206ENST00000542310 DNAH5Q8TE73 4624 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 M0R2P5 195 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 STAG3L2P0CL84 134 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 STAG3L3P0CL85 134 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 ARL14EPLP0DKL9 152 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 SRIP30626 198 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 LYPD5Q6UWN5 251 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 ASB13Q8WXK3 278 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 ZNF479Q96JC4 524 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 NAGKQ9UJ70 344 aa10.69□□□□□ -0.7
VPS33A-206ENST00000542310 APOBP04114 4563 aaKnown RBP10.68□□□□□ -0.7
VPS33A-206ENST00000542310 IGHV3-16A0A0C4DH30 117 aa10.68□□□□□ -0.7
VPS33A-206ENST00000542310 C9JCJ5 164 aa10.68□□□□□ -0.7
VPS33A-206ENST00000542310 K7EQD1 137 aa10.68□□□□□ -0.7
VPS33A-206ENST00000542310 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.7
VPS33A-206ENST00000542310 SFTA3P0C7M3 94 aa10.68□□□□□ -0.7
VPS33A-206ENST00000542310 C5orf17Q8NAS9 161 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms