RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 IGHV1-69P01742 117 aa11.19□□□□□ -0.62
TRPM1-203ENST00000542188 GATA4P43694 442 aa11.19□□□□□ -0.62
TRPM1-203ENST00000542188 KNTC1P50748 2209 aa11.19□□□□□ -0.62
TRPM1-203ENST00000542188 TRBV12-3P01733 135 aa11.19□□□□□ -0.62
TRPM1-203ENST00000542188 PRDM6Q9NQX0 595 aa11.19□□□□□ -0.62
TRPM1-203ENST00000542188 TDRD15B5MCY1 1934 aaKnown RBP11.19□□□□□ -0.62
TRPM1-203ENST00000542188 MSMBP08118 114 aa11.19□□□□□ -0.62
TRPM1-203ENST00000542188 RUSC1-AS1Q66K80 236 aa11.19□□□□□ -0.62
TRPM1-203ENST00000542188 SHANK3Q9BYB0 1731 aa11.19□□□□□ -0.62
TRPM1-203ENST00000542188 A0A0G2JNJ9 132 aa11.18□□□□□ -0.62
TRPM1-203ENST00000542188 Q9UFV3 132 aa11.18□□□□□ -0.62
TRPM1-203ENST00000542188 MBD3L4A6NDZ8 208 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-203ENST00000542188 MBD3L3A6NE82 208 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-203ENST00000542188 MBD3L5A6NJ08 208 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-203ENST00000542188 MBD3L2Q8NHZ7 208 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-203ENST00000542188 TIMM17AQ99595 171 aa11.18□□□□□ -0.62
TRPM1-203ENST00000542188 BPESC1Q9GZL8 116 aa11.18□□□□□ -0.62
TRPM1-203ENST00000542188 HIGD1BQ9P298 99 aa11.18□□□□□ -0.62
TRPM1-203ENST00000542188 LENEPQ9Y5L5 61 aa11.18□□□□□ -0.62
TRPM1-203ENST00000542188 A4D1N5 150 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 Q8TCH9 128 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 EPOPA6NHQ4 379 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 COX7A2LO14548 114 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 HIST2H2BCQ6DN03 193 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 ZMAT4Q9H898 229 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 MTCL1Q9Y4B5 1905 aaKnown RBP11.17□□□□□ -0.62
TRPM1-203ENST00000542188 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 H3BUA1 57 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 PRR15LQ9BU68 103 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 TMEM256-PLSCR3K7ERE1 68 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 LGALS9O00182 355 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 Q6ZUT4 128 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 ZNF581Q9P0T4 197 aa11.17□□□□□ -0.62
TRPM1-203ENST00000542188 GBF1Q92538 1859 aa11.16□□□□□ -0.62
TRPM1-203ENST00000542188 G3V4G9 280 aa11.16□□□□□ -0.62
TRPM1-203ENST00000542188 LMO1P25800 156 aa11.16□□□□□ -0.62
TRPM1-203ENST00000542188 UBE2AP49459 152 aa11.16□□□□□ -0.62
TRPM1-203ENST00000542188 C4orf48Q5BLP8 95 aa11.16□□□□□ -0.62
TRPM1-203ENST00000542188 Q6ZQT7 251 aa11.16□□□□□ -0.62
TRPM1-203ENST00000542188 LINC00311Q8N616 119 aa11.16□□□□□ -0.62
TRPM1-203ENST00000542188 FAM120AOSQ5T036 256 aa11.16□□□□□ -0.62
TRPM1-203ENST00000542188 KLF2Q9Y5W3 355 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-203ENST00000542188 PLXNB2O15031 1838 aa11.16□□□□□ -0.62
TRPM1-203ENST00000542188 RNF144BQ7Z419 303 aa11.15□□□□□ -0.62
TRPM1-203ENST00000542188 LINC00643Q86TS7 51 aa11.15□□□□□ -0.62
TRPM1-203ENST00000542188 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
TRPM1-203ENST00000542188 NOP10Q9NPE3 64 aaKnown RBP11.15□□□□□ -0.62
TRPM1-203ENST00000542188 IGKV1-6A0A0C4DH72 117 aa11.15□□□□□ -0.62
TRPM1-203ENST00000542188 FAM236DA0A1B0GTK5 79 aa11.15□□□□□ -0.62
TRPM1-203ENST00000542188 K7EN84 100 aa11.15□□□□□ -0.62
TRPM1-203ENST00000542188 FAM236CP0DP71 79 aa11.15□□□□□ -0.62
TRPM1-203ENST00000542188 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
TRPM1-203ENST00000542188 PIKFYVEQ9Y2I7 2098 aa11.15□□□□□ -0.63
TRPM1-203ENST00000542188 CXCL5P42830 114 aa11.15□□□□□ -0.63
TRPM1-203ENST00000542188 DAZ2Q13117 558 aaKnown RBP11.15□□□□□ -0.63
TRPM1-203ENST00000542188 CASC2Q6XLA1 102 aa11.15□□□□□ -0.63
TRPM1-203ENST00000542188 DAZ4Q86SG3 579 aaKnown RBP11.15□□□□□ -0.63
TRPM1-203ENST00000542188 DAZ3Q9NR90 486 aaKnown RBP11.15□□□□□ -0.63
TRPM1-203ENST00000542188 KIAA0100Q14667 2235 aaKnown RBP11.15□□□□□ -0.63
TRPM1-203ENST00000542188 TRAV26-1A0A087WT03 109 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 G3V318 75 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 NHSL1Q5SYE7 1610 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 K7EQD1 137 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 WDR86Q86TI4 376 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
TRPM1-203ENST00000542188 J3QLI3 93 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 LY6DQ14210 128 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 DIRC1Q969H9 104 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 WFDC2Q14508 124 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 NCR3O14931 201 aa11.14□□□□□ -0.63
TRPM1-203ENST00000542188 SPTBP11277 2137 aa11.13□□□□□ -0.63
TRPM1-203ENST00000542188 H0Y9J4 135 aa11.13□□□□□ -0.63
TRPM1-203ENST00000542188 IGKV4-1P06312 121 aa11.13□□□□□ -0.63
TRPM1-203ENST00000542188 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
TRPM1-203ENST00000542188 ATG2BQ96BY7 2078 aa11.13□□□□□ -0.63
TRPM1-203ENST00000542188 GNRH2O43555 120 aa11.13□□□□□ -0.63
TRPM1-203ENST00000542188 ELANEP08246 267 aa11.13□□□□□ -0.63
TRPM1-203ENST00000542188 A0A0J9YY99 117 aa11.12□□□□□ -0.63
TRPM1-203ENST00000542188 GNLYP22749 145 aa11.12□□□□□ -0.63
TRPM1-203ENST00000542188 UPK3BQ9BT76 320 aa11.12□□□□□ -0.63
TRPM1-203ENST00000542188 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.12□□□□□ -0.63
TRPM1-203ENST00000542188 ZNF236Q9UL36 1845 aa11.12□□□□□ -0.63
TRPM1-203ENST00000542188 LECT2O14960 151 aa11.12□□□□□ -0.63
TRPM1-203ENST00000542188 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.12□□□□□ -0.63
TRPM1-203ENST00000542188 NDUFA1O15239 70 aa11.12□□□□□ -0.63
TRPM1-203ENST00000542188 C16orf74Q96GX8 76 aa11.12□□□□□ -0.63
TRPM1-203ENST00000542188 E7EQL1 145 aa11.12□□□□□ -0.63
TRPM1-203ENST00000542188 Q9HAA7 133 aa11.12□□□□□ -0.63
TRPM1-203ENST00000542188 UQCRQO14949 82 aa11.11□□□□□ -0.63
TRPM1-203ENST00000542188 CD59P13987 128 aa11.11□□□□□ -0.63
TRPM1-203ENST00000542188 SLX1AQ9BQ83 275 aa11.11□□□□□ -0.63
TRPM1-203ENST00000542188 RNF183Q96D59 192 aa11.11□□□□□ -0.63
TRPM1-203ENST00000542188 FAM110AQ9BQ89 295 aa11.11□□□□□ -0.63
TRPM1-203ENST00000542188 C17orf58Q2M2W7 97 aa11.11□□□□□ -0.63
TRPM1-203ENST00000542188 RNASE8Q8TDE3 154 aaKnown RBP11.11□□□□□ -0.63
TRPM1-203ENST00000542188 ATP5EP56381 51 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-203ENST00000542188 ZNRD1Q9P1U0 126 aa11.11□□□□□ -0.63
TRPM1-203ENST00000542188 WNK3Q9BYP7 1800 aa11.11□□□□□ -0.63
TRPM1-203ENST00000542188 COA6Q5JTJ3 125 aaKnown RBP11.1□□□□□ -0.63
TRPM1-203ENST00000542188 B3GALT5-AS1P59052 145 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms