RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ODF3Q96PU9 254 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 LINC01587Q99440 93 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 NIPSNAP3BQ9BS92 247 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 MRPL32Q9BYC8 188 aaKnown RBP4.07□□□□□ -1.76
SUDS3-202ENST00000541280 PARD6GQ9BYG4 376 aaPredicted RBP4.07□□□□□ -1.76
SUDS3-202ENST00000541280 WDR61Q9GZS3 305 aaKnown RBP4.07□□□□□ -1.76
SUDS3-202ENST00000541280 TIMM9Q9Y5J7 89 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 DNAH9Q9NYC9 4486 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 TRBV19A0A075B6N1 114 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 IGHV3OR16-12A0A075B7B8 117 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 IGLV5-45A0A087WSX0 123 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 TRBV7-9A0A0J9YWB2 115 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 UBE2L5PA0A1B0GUS4 154 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 DEFB4AO15263 64 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 SIX6O95475 246 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 MPC2O95563 127 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 NMBP08949 121 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 P0DMU3 169 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 FAM231AP0DMU4 169 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 FAM231CP0DMU5 169 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 RPL12P30050 165 aaKnown RBP4.06□□□□□ -1.76
SUDS3-202ENST00000541280 LEPP41159 167 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 CSN1S1P47710 185 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 H2BFSP57053 126 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 FXYD7P58549 80 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 TAS2R45P59539 299 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 HIST1H1AQ02539 215 aaPredicted RBP4.06□□□□□ -1.76
SUDS3-202ENST00000541280 ZNF266Q14584 549 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 C1orf158Q8N1D5 194 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 RNF182Q8N6D2 247 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 ARL6IP6Q8N6S5 226 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 C16orf74Q96GX8 76 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 ATP5SQ99766 215 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 NDUFAF3Q9BU61 184 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 SLC35B3Q9H1N7 401 aa4.06□□□□□ -1.76
SUDS3-202ENST00000541280 IGHV4-4A0A075B6R2 117 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 TRAV5A0A0B4J249 113 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 H3BQ15 152 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 CRXO43186 299 aaPredicted RBP4.05□□□□□ -1.76
SUDS3-202ENST00000541280 MBP02144 154 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 SLC25A5P05141 298 aaKnown RBP4.05□□□□□ -1.76
SUDS3-202ENST00000541280 NBEAP1P0C6P0 100 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 EMP1P54849 157 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 DAD1P61803 113 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 CLINT1Q14677 625 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 SPINK13Q1W4C9 94 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 ACOT6Q3I5F7 207 aaPredicted RBP4.05□□□□□ -1.76
SUDS3-202ENST00000541280 FAM74A1Q5RGS3 127 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 FAM222AQ5U5X8 452 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 NOTCH2NLQ7Z3S9 236 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 RPP25LQ8N5L8 163 aaKnown RBP4.05□□□□□ -1.76
SUDS3-202ENST00000541280 RXFP4Q8TDU9 374 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 PYGO2Q9BRQ0 406 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 MED28Q9H204 178 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 OR51M1Q9H341 326 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 ZNF586Q9NXT0 402 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 OR5AC2Q9NZP5 309 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 APLNQ9ULZ1 77 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 FUT9Q9Y231 359 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 HSPB11Q9Y547 144 aa4.05□□□□□ -1.76
SUDS3-202ENST00000541280 YTHDF2Q9Y5A9 579 aaKnown RBP4.05□□□□□ -1.76
SUDS3-202ENST00000541280 TIMM8BQ9Y5J9 83 aaPredicted RBP4.05□□□□□ -1.76
SUDS3-202ENST00000541280 A0A1W2PPV4 95 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 RBAKDNA6NC62 111 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 M0R2Z0 102 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 M6PRP20645 277 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 DEFB1P60022 68 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 ZC2HC1BQ5TFG8 222 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 C15orf53Q8NAA6 179 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 INO80EQ8NBZ0 244 aaPredicted RBP4.04□□□□□ -1.76
SUDS3-202ENST00000541280 TMEM263Q8WUH6 116 aaKnown RBP4.04□□□□□ -1.76
SUDS3-202ENST00000541280 LINC00467Q9BRT7 94 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 PAXXQ9BUH6 204 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 TENM3Q9P273 2699 aa4.04□□□□□ -1.76
SUDS3-202ENST00000541280 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
SUDS3-202ENST00000541280 TRAV12-2A0A075B6T6 113 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 ZNF705GA8MUZ8 300 aaPredicted RBP4.03□□□□□ -1.76
SUDS3-202ENST00000541280 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 VCYO14598 125 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 OR7C2O60412 319 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 GIPP09681 153 aaPredicted RBP4.03□□□□□ -1.76
SUDS3-202ENST00000541280 CRISP2P16562 243 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 SERF2P84101 59 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 RGS21Q2M5E4 152 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 RNF212Q495C1 297 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 KHDC3LQ587J8 217 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 FFAR4Q5NUL3 377 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 TMEM78Q5T7P6 136 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 POM121L12Q8N7R1 296 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 ZNF680Q8NEM1 530 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 BLNKQ8WV28 456 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 FAM167A-AS1Q96KT0 104 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 AQP10Q96PS8 301 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 SLC25A2Q9BXI2 301 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 MBD2Q9UBB5 411 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 CELA1Q9UNI1 258 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 LENEPQ9Y5L5 61 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 ALG5Q9Y673 324 aa4.03□□□□□ -1.76
SUDS3-202ENST00000541280 BORCS7-ASMTA0A0B4J1R7 106 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms