RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 SYS1-DBNDD2H3BUS1 97 aa8.03□□□□□ -1.12
TRERF1-205ENST00000541110 NDUFA4O00483 81 aa8.03□□□□□ -1.12
TRERF1-205ENST00000541110 WDR90Q96KV7 1748 aa8.03□□□□□ -1.12
TRERF1-205ENST00000541110 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.03□□□□□ -1.12
TRERF1-205ENST00000541110 IGKV2-29A2NJV5 120 aaPredicted RBP8.03□□□□□ -1.12
TRERF1-205ENST00000541110 TMEM190Q8WZ59 177 aa8.03□□□□□ -1.12
TRERF1-205ENST00000541110 PLXNA3P51805 1871 aa8.03□□□□□ -1.12
TRERF1-205ENST00000541110 SDHAF1A6NFY7 115 aa8.02□□□□□ -1.12
TRERF1-205ENST00000541110 LINC00473A8K010 186 aa8.02□□□□□ -1.12
TRERF1-205ENST00000541110 IGKV4-1P06312 121 aa8.02□□□□□ -1.12
TRERF1-205ENST00000541110 Q6ZS92 163 aa8.02□□□□□ -1.12
TRERF1-205ENST00000541110 C5orf38Q86SI9 138 aa8.02□□□□□ -1.12
TRERF1-205ENST00000541110 TEX22C9J3V5 150 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 SLURP1P55000 103 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 SVIPQ8NHG7 77 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 MRPL53Q96EL3 112 aaKnown RBP8.02□□□□□ -1.13
TRERF1-205ENST00000541110 SPATA25Q9BR10 227 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 SHANK2-AS3Q9BTD1 123 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 MRPL27Q9P0M9 148 aaKnown RBP8.02□□□□□ -1.13
TRERF1-205ENST00000541110 F6UB75 175 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 TET2Q6N021 2002 aaPredicted RBP8.02□□□□□ -1.13
TRERF1-205ENST00000541110 IFITM3Q01628 133 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 PDE6HQ13956 83 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 VPREB3Q9UKI3 123 aa8.02□□□□□ -1.13
TRERF1-205ENST00000541110 IGHV4-59P01825 116 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 MRPL23Q16540 153 aaKnown RBP8.01□□□□□ -1.13
TRERF1-205ENST00000541110 LINC00479Q96M42 142 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 WDR83OSQ9Y284 106 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 ROS1P08922 2347 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 A0A1B0GW64 132 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 DEFB112Q30KQ8 113 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 LINC01551Q86U37 167 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 PROP1O75360 226 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 PRSS57Q6UWY2 283 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 PLXNB3Q9ULL4 1909 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 IGKV1-27A0A075B6S5 117 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 COX7B2Q8TF08 81 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 CARHSP1Q9Y2V2 147 aaKnown RBP8.01□□□□□ -1.13
TRERF1-205ENST00000541110 WISP1O95388 367 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 C5orf24Q7Z6I8 188 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 OR11H6Q8NGC7 330 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 A0A0G2JMZ2 1700 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 LRRC37A2A6NM11 1700 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 IGLV3-32A0A0A0MS00 114 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 Q86TA4 180 aa8.01□□□□□ -1.13
TRERF1-205ENST00000541110 UTF1Q5T230 341 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 ZNF106Q9H2Y7 1883 aaKnown RBP8□□□□□ -1.13
TRERF1-205ENST00000541110 DEFB4AO15263 64 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 FAM104BQ5XKR9 115 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 LAIR2Q6ISS4 152 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 C2orf66Q6UXQ4 117 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 IGHV4OR15-8A0A075B7B6 117 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 IGKV1D-8A0A087WSZ0 117 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 A0A087WW49 117 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 NPBQ8NG41 125 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 IL17DQ8TAD2 202 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 DUX4L9Q6RFH8 374 aaPredicted RBP8□□□□□ -1.13
TRERF1-205ENST00000541110 ZSWIM8A7E2V4 1837 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 IGKV1-12A0A0C4DH73 117 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 COX7A2LO14548 114 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 NCR3O14931 201 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST1H2BKO60814 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST1H2BJP06899 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST1H2BOP23527 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST1H2BBP33778 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST1H2BDP58876 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST1H2BCP62807 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST2H2BEQ16778 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST2H2BFQ5QNW6 126 aaPredicted RBP8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST1H2BHQ93079 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 VWCEQ96DN2 955 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST1H2BNQ99877 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 HIST1H2BMQ99879 126 aa8□□□□□ -1.13
TRERF1-205ENST00000541110 IGHV7-4-1A0A0J9YVY3 117 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 LINC00114Q6XXX2 140 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 DSCAMO60469 2012 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 THSD7AQ9UPZ6 1657 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 TRAV4A0A0B4J268 109 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 MP68P56378 58 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 B9D2Q9BPU9 175 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 PLXNA4Q9HCM2 1894 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 Q6ZWC4 215 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 C16orf74Q96GX8 76 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 HGFACQ04756 655 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 AMTNQ6UX39 209 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 A0A087WV48 116 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 ETV2O00321 342 aaPredicted RBP7.99□□□□□ -1.13
TRERF1-205ENST00000541110 GFI1Q99684 422 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 WNK1Q9H4A3 2382 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 IFITM1P13164 125 aa7.99□□□□□ -1.13
TRERF1-205ENST00000541110 Q6P435 159 aa7.98□□□□□ -1.13
TRERF1-205ENST00000541110 C17orf77Q96MU5 243 aa7.98□□□□□ -1.13
TRERF1-205ENST00000541110 Q8NFD4 153 aa7.98□□□□□ -1.13
TRERF1-205ENST00000541110 VSIG2Q96IQ7 327 aa7.98□□□□□ -1.13
TRERF1-205ENST00000541110 CARD19Q96LW7 228 aa7.98□□□□□ -1.13
TRERF1-205ENST00000541110 ZFP36P26651 326 aaKnown RBP7.98□□□□□ -1.13
TRERF1-205ENST00000541110 RNF222A6NCQ9 220 aa7.98□□□□□ -1.13
TRERF1-205ENST00000541110 A0A1B0GX51 115 aa7.98□□□□□ -1.13
TRERF1-205ENST00000541110 HOXB4P17483 251 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms