RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SFTA2Q6UW10 78 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 GTF2H5Q6ZYL4 71 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 LYPD1Q8N2G4 141 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 CHAC1Q9BUX1 264 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 MAP1LC3AQ9H492 121 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 A0A1B0GW15 77 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 B9A039 149 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 FCER1GP30273 86 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 MRPL35Q9NZE8 188 aaKnown RBP8□□□□□ -1.13
CDC42SE1-207ENST00000540998 NDUFA3O95167 84 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 CLEC3BP05452 202 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 C15orf32Q32M92 178 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 SAMD5Q5TGI4 173 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 ARL6IP6Q8N6S5 226 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 PSMG3-AS1Q96PY0 264 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 NPFFR1Q9GZQ6 430 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 TRBV25-1A0A075B6N4 114 aa7.99□□□□□ -1.13
CDC42SE1-207ENST00000540998 RPL7P18124 248 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-207ENST00000540998 CLEC19AQ6UXS0 136 aa7.99□□□□□ -1.13
CDC42SE1-207ENST00000540998 G3V4G9 280 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 ZFP36P26651 326 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 RAB1BQ9H0U4 201 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 ZANQ9Y493 2812 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 IGKV3-7A0A075B6H7 116 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 IGHV3OR16-10A0A075B7F0 116 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 IGHV7-81A0A0B4J1V7 117 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 TMEM238C9JI98 176 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 PDE6HQ13956 83 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 VMO1Q7Z5L0 202 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 OR9G4Q8NGQ1 327 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 AGPAT4-IT1Q9H0P7 198 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 IGKCP01834 107 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 SMIM17P0DL12 118 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 RPS20P60866 119 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 WFDC2Q14508 124 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 PRR9Q5T870 116 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 SH2D6Q7Z4S9 175 aa7.98□□□□□ -1.13
CDC42SE1-207ENST00000540998 FABP2P12104 132 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 GTSF1LQ9H1H1 148 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 H3BVH4 76 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 CCL21O00585 134 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 SMIM13P0DJ93 91 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 NEGR1Q7Z3B1 354 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 NPBQ8NG41 125 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 OR4X2Q8NGF9 303 aa7.97□□□□□ -1.13
CDC42SE1-207ENST00000540998 H3BMG7 143 aa7.96□□□□□ -1.13
CDC42SE1-207ENST00000540998 BMI1P35226 326 aa7.96□□□□□ -1.13
CDC42SE1-207ENST00000540998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.96□□□□□ -1.14
CDC42SE1-207ENST00000540998 ATP6V0E1O15342 81 aa7.96□□□□□ -1.14
CDC42SE1-207ENST00000540998 TMEM219Q86XT9 240 aa7.96□□□□□ -1.14
CDC42SE1-207ENST00000540998 LY6G5BQ8NDX9 201 aa7.96□□□□□ -1.14
CDC42SE1-207ENST00000540998 ABCA2Q9BZC7 2435 aa7.96□□□□□ -1.14
CDC42SE1-207ENST00000540998 EMP1P54849 157 aa7.96□□□□□ -1.14
CDC42SE1-207ENST00000540998 OR11H6Q8NGC7 330 aa7.96□□□□□ -1.14
CDC42SE1-207ENST00000540998 CLPSL1A2RUU4 121 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 INSL3P51460 131 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 TTC9CQ8N5M4 171 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 PHLDA1Q8WV24 401 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 GLMPQ8WWB7 406 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 DPF1Q92782 380 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 MSRB2Q9Y3D2 182 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 ITPR1Q14643 2758 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 IGLV2-18A0A075B6J9 118 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 TRAV8-2A0A0B4J237 113 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 ODF3BA8MYP8 253 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 M0R381 172 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 BUB3O43684 328 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 CCDC140Q96MF4 163 aa7.95□□□□□ -1.14
CDC42SE1-207ENST00000540998 DPM2O94777 84 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 SMAGPQ0VAQ4 97 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 Q8N9W7 124 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 RPL39LQ96EH5 51 aaKnown RBP7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 RNF5Q99942 180 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 ZFAND3Q9H8U3 227 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 IGHV7-4-1A0A0J9YVY3 117 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 A0A1W2PPR1 153 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 CEACAM3P40198 252 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 SPANXN1Q5VSR9 72 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 NRACQ8N912 160 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 COL25A1Q9BXS0 654 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 ZMAT4Q9H898 229 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 FLNCQ14315 2725 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 POLQO75417 2590 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 F6UB75 175 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 ETDBQ3ZM63 59 aa7.94□□□□□ -1.14
CDC42SE1-207ENST00000540998 PRTN3P24158 256 aa7.93□□□□□ -1.14
CDC42SE1-207ENST00000540998 FOXC1Q12948 553 aa7.93□□□□□ -1.14
CDC42SE1-207ENST00000540998 CEND1Q8N111 149 aa7.93□□□□□ -1.14
CDC42SE1-207ENST00000540998 SRSF8Q9BRL6 282 aaKnown RBP7.93□□□□□ -1.14
CDC42SE1-207ENST00000540998 USP9YO00507 2555 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE1-207ENST00000540998 TRBV12-3P01733 135 aa7.93□□□□□ -1.14
CDC42SE1-207ENST00000540998 IGF2-ASQ6U949 168 aa7.93□□□□□ -1.14
CDC42SE1-207ENST00000540998 C20orf173Q96LM9 149 aa7.93□□□□□ -1.14
CDC42SE1-207ENST00000540998 SIVA1O15304 175 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 LINC01559Q495D7 138 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 C8orf86Q6ZUL3 223 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 ZNF502Q8TBZ5 544 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms