RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SAPCD1Q5SSQ6 148 aa11.18□□□□□ -0.62
DDB1-218ENST00000540784 C11orf68Q9H3H3 251 aaKnown RBP11.18□□□□□ -0.62
DDB1-218ENST00000540784 LOC102723971A0A1B0GUV8 181 aa11.17□□□□□ -0.62
DDB1-218ENST00000540784 TMEM189A5PLL7 270 aa11.17□□□□□ -0.62
DDB1-218ENST00000540784 IGLV2-11P01706 119 aa11.17□□□□□ -0.62
DDB1-218ENST00000540784 PRM2P04554 102 aa11.17□□□□□ -0.62
DDB1-218ENST00000540784 ZNF680Q8NEM1 530 aa11.17□□□□□ -0.62
DDB1-218ENST00000540784 TVP23CQ96ET8 276 aa11.17□□□□□ -0.62
DDB1-218ENST00000540784 TXNDC17Q9BRA2 123 aa11.17□□□□□ -0.62
DDB1-218ENST00000540784 AZU1P20160 251 aa11.16□□□□□ -0.62
DDB1-218ENST00000540784 TAGLN2P37802 199 aaKnown RBP11.16□□□□□ -0.62
DDB1-218ENST00000540784 EMP1P54849 157 aa11.16□□□□□ -0.62
DDB1-218ENST00000540784 PRR9Q5T870 116 aa11.16□□□□□ -0.62
DDB1-218ENST00000540784 IL17DQ8TAD2 202 aa11.16□□□□□ -0.62
DDB1-218ENST00000540784 PYGO2Q9BRQ0 406 aa11.16□□□□□ -0.62
DDB1-218ENST00000540784 KLF12Q9Y4X4 402 aa11.16□□□□□ -0.62
DDB1-218ENST00000540784 S100A9P06702 114 aaKnown RBP11.15□□□□□ -0.62
DDB1-218ENST00000540784 UBE2G1P62253 170 aa11.15□□□□□ -0.62
DDB1-218ENST00000540784 LYPD6BQ8NI32 183 aa11.15□□□□□ -0.62
DDB1-218ENST00000540784 C11orf45Q8TAV5 145 aa11.15□□□□□ -0.62
DDB1-218ENST00000540784 FMC1Q96HJ9 113 aa11.15□□□□□ -0.62
DDB1-218ENST00000540784 VAX2Q9UIW0 290 aa11.15□□□□□ -0.62
DDB1-218ENST00000540784 SCO2A0A1W2PP80 73 aa11.14□□□□□ -0.63
DDB1-218ENST00000540784 CXorf65A6NEN9 183 aa11.14□□□□□ -0.63
DDB1-218ENST00000540784 RGS13O14921 159 aa11.14□□□□□ -0.63
DDB1-218ENST00000540784 BCL2P10415 239 aa11.14□□□□□ -0.63
DDB1-218ENST00000540784 AKR1C3P42330 323 aa11.14□□□□□ -0.63
DDB1-218ENST00000540784 TMEM183BQ1AE95 376 aa11.14□□□□□ -0.63
DDB1-218ENST00000540784 SMUG1Q53HV7 270 aa11.14□□□□□ -0.63
DDB1-218ENST00000540784 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
DDB1-218ENST00000540784 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
DDB1-218ENST00000540784 TRAV21A0A0B4J279 112 aa11.13□□□□□ -0.63
DDB1-218ENST00000540784 TRBV6-1A0A0K0K1D8 114 aa11.13□□□□□ -0.63
DDB1-218ENST00000540784 PDE6DO43924 150 aa11.13□□□□□ -0.63
DDB1-218ENST00000540784 SPART-AS1P0CW21 52 aa11.13□□□□□ -0.63
DDB1-218ENST00000540784 MEF2BQ02080 365 aaPredicted RBP11.13□□□□□ -0.63
DDB1-218ENST00000540784 Q6AWC8 147 aa11.13□□□□□ -0.63
DDB1-218ENST00000540784 Q6ZQT7 251 aa11.13□□□□□ -0.63
DDB1-218ENST00000540784 EIF4E3Q8N5X7 224 aaKnown RBP11.13□□□□□ -0.63
DDB1-218ENST00000540784 MUC7Q8TAX7 377 aa11.13□□□□□ -0.63
DDB1-218ENST00000540784 C8orf49Q96NF6 230 aa11.13□□□□□ -0.63
DDB1-218ENST00000540784 LINC00467Q9BRT7 94 aa11.13□□□□□ -0.63
DDB1-218ENST00000540784 IGHV1OR15-1A0A075B7D0 117 aa11.12□□□□□ -0.63
DDB1-218ENST00000540784 RBFOX3A6NFN3 312 aa11.12□□□□□ -0.63
DDB1-218ENST00000540784 CBY3A6NI87 242 aa11.12□□□□□ -0.63
DDB1-218ENST00000540784 GCGP01275 180 aa11.12□□□□□ -0.63
DDB1-218ENST00000540784 FAM159AQ6UWV7 190 aa11.12□□□□□ -0.63
DDB1-218ENST00000540784 C2CD4CQ8TF44 421 aa11.12□□□□□ -0.63
DDB1-218ENST00000540784 TMEM263Q8WUH6 116 aaKnown RBP11.12□□□□□ -0.63
DDB1-218ENST00000540784 C16orf74Q96GX8 76 aa11.12□□□□□ -0.63
DDB1-218ENST00000540784 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
DDB1-218ENST00000540784 NANOS2P60321 138 aaKnown RBP11.11□□□□□ -0.63
DDB1-218ENST00000540784 MUC21Q5SSG8 566 aa11.11□□□□□ -0.63
DDB1-218ENST00000540784 Q86TA4 180 aa11.11□□□□□ -0.63
DDB1-218ENST00000540784 MED9Q9NWA0 146 aa11.11□□□□□ -0.63
DDB1-218ENST00000540784 C3orf84H3BNL1 204 aa11.1□□□□□ -0.63
DDB1-218ENST00000540784 LTAP01374 205 aa11.1□□□□□ -0.63
DDB1-218ENST00000540784 ZNF80P51504 273 aaPredicted RBP11.1□□□□□ -0.63
DDB1-218ENST00000540784 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
DDB1-218ENST00000540784 FAM222AQ5U5X8 452 aa11.1□□□□□ -0.63
DDB1-218ENST00000540784 BAGE2Q86Y30 109 aa11.1□□□□□ -0.63
DDB1-218ENST00000540784 RNASE8Q8TDE3 154 aaKnown RBP11.1□□□□□ -0.63
DDB1-218ENST00000540784 PCNPQ8WW12 178 aaKnown RBP11.1□□□□□ -0.63
DDB1-218ENST00000540784 C11orf52Q96A22 123 aa11.1□□□□□ -0.63
DDB1-218ENST00000540784 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
DDB1-218ENST00000540784 NAGKQ9UJ70 344 aa11.1□□□□□ -0.63
DDB1-218ENST00000540784 TIMM8BQ9Y5J9 83 aaPredicted RBP11.1□□□□□ -0.63
DDB1-218ENST00000540784 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
DDB1-218ENST00000540784 FABP5P3A8MUU1 101 aa11.09□□□□□ -0.63
DDB1-218ENST00000540784 PFN1P07737 140 aaKnown RBP11.09□□□□□ -0.63
DDB1-218ENST00000540784 RPL35P42766 123 aaKnown RBP11.09□□□□□ -0.63
DDB1-218ENST00000540784 TMEM183AQ8IXX5 376 aa11.09□□□□□ -0.63
DDB1-218ENST00000540784 EIF5A2Q9GZV4 153 aaKnown RBP11.09□□□□□ -0.63
DDB1-218ENST00000540784 TP53TG3Q9ULZ0 132 aa11.09□□□□□ -0.63
DDB1-218ENST00000540784 CELA1Q9UNI1 258 aa11.09□□□□□ -0.63
DDB1-218ENST00000540784 PLAC8L1A1L4L8 177 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 LYRM9A8MSI8 78 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 SNURFLB1AK76 121 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 RAB14P61106 215 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 C12orf74Q32Q52 190 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 ZNF506Q5JVG8 444 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 COX8CQ7Z4L0 72 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 KCNS1Q96KK3 526 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
DDB1-218ENST00000540784 GSN-AS1Q9NRJ2 163 aa11.08□□□□□ -0.64
DDB1-218ENST00000540784 TDRG1Q3Y452 100 aa11.07□□□□□ -0.64
DDB1-218ENST00000540784 ZNF767PQ75MW2 155 aa11.07□□□□□ -0.64
DDB1-218ENST00000540784 ZC2HC1AQ96GY0 325 aa11.07□□□□□ -0.64
DDB1-218ENST00000540784 FAM210AQ96ND0 272 aa11.07□□□□□ -0.64
DDB1-218ENST00000540784 DERL1Q9BUN8 251 aa11.07□□□□□ -0.64
DDB1-218ENST00000540784 TRGV11A0A075B6L2 103 aa11.06□□□□□ -0.64
DDB1-218ENST00000540784 RAB19A4D1S5 217 aa11.06□□□□□ -0.64
DDB1-218ENST00000540784 GNRH2O43555 120 aa11.06□□□□□ -0.64
DDB1-218ENST00000540784 CRIP1P50238 77 aa11.06□□□□□ -0.64
DDB1-218ENST00000540784 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
DDB1-218ENST00000540784 TOR2AQ5JU69 321 aa11.06□□□□□ -0.64
DDB1-218ENST00000540784 IBA57Q5T440 356 aaKnown RBP11.06□□□□□ -0.64
DDB1-218ENST00000540784 FAM162BQ5T6X4 162 aa11.06□□□□□ -0.64
DDB1-218ENST00000540784 NHLRC2Q8NBF2 726 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms