RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 C16orf95Q9H693 158 aa12.91□□□□□ -0.34
COPS3-212ENST00000539941 DAZ1Q9NQZ3 744 aaKnown RBP12.91□□□□□ -0.34
COPS3-212ENST00000539941 TRBV6-1A0A0K0K1D8 114 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 SERTM2A0A1B0GWG4 89 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 ZNF785A8K8V0 405 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 SNURFLB1AK76 121 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 K7EQM0 130 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 HLA-DQA1P01909 254 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 C3orf79P0CE67 100 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 SCGB1A1P11684 91 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 GLMPQ8WWB7 406 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 WFDC12Q8WWY7 111 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 SLC50A1Q9BRV3 221 aa12.9□□□□□ -0.34
COPS3-212ENST00000539941 ISLRO14498 428 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 APOHP02749 345 aaPredicted RBP12.89□□□□□ -0.35
COPS3-212ENST00000539941 CSN1S1P47710 185 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 MAJINQ3KP22 176 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 LINC00479Q96M42 142 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 ST20Q9HBF5 79 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 ZNF331Q9NQX6 463 aaPredicted RBP12.89□□□□□ -0.35
COPS3-212ENST00000539941 UFC1Q9Y3C8 167 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 K7EN84 100 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 M0QZ24 198 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 CRLF1O75462 422 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 IGLV2-8P01709 118 aa12.89□□□□□ -0.35
COPS3-212ENST00000539941 WIPF2Q8TF74 440 aaPredicted RBP12.89□□□□□ -0.35
COPS3-212ENST00000539941 DNHD1Q96M86 4753 aa12.88□□□□□ -0.35
COPS3-212ENST00000539941 TRAV34A0A0B4J273 112 aa12.88□□□□□ -0.35
COPS3-212ENST00000539941 IGHV3-66A0A0C4DH42 116 aa12.88□□□□□ -0.35
COPS3-212ENST00000539941 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
COPS3-212ENST00000539941 RASL11AQ6T310 242 aa12.88□□□□□ -0.35
COPS3-212ENST00000539941 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.88□□□□□ -0.35
COPS3-212ENST00000539941 DEFB125Q8N687 156 aa12.88□□□□□ -0.35
COPS3-212ENST00000539941 TMEM75Q8N9X5 138 aa12.88□□□□□ -0.35
COPS3-212ENST00000539941 CLEC5AQ9NY25 188 aa12.88□□□□□ -0.35
COPS3-212ENST00000539941 IGHV3OR16-13A0A075B7E8 117 aa12.87□□□□□ -0.35
COPS3-212ENST00000539941 IGHV3-49A0A0A0MS15 119 aa12.87□□□□□ -0.35
COPS3-212ENST00000539941 IGHV3-74A0A0B4J1X5 117 aa12.87□□□□□ -0.35
COPS3-212ENST00000539941 FBLL1A6NHQ2 334 aaKnown RBP12.87□□□□□ -0.35
COPS3-212ENST00000539941 LGALS9O00182 355 aa12.87□□□□□ -0.35
COPS3-212ENST00000539941 GOLT1AQ6ZVE7 132 aa12.87□□□□□ -0.35
COPS3-212ENST00000539941 C4orf3Q8WVX3 66 aa12.87□□□□□ -0.35
COPS3-212ENST00000539941 CUBNO60494 3623 aa12.87□□□□□ -0.35
COPS3-212ENST00000539941 FBN1P35555 2871 aaKnown RBP12.87□□□□□ -0.35
COPS3-212ENST00000539941 NDUFA7O95182 113 aa12.86□□□□□ -0.35
COPS3-212ENST00000539941 LTAP01374 205 aa12.86□□□□□ -0.35
COPS3-212ENST00000539941 NAT8BQ9UHF3 227 aa12.86□□□□□ -0.35
COPS3-212ENST00000539941 TAX1BP3O14907 124 aa12.86□□□□□ -0.35
COPS3-212ENST00000539941 PMCHP20382 165 aa12.86□□□□□ -0.35
COPS3-212ENST00000539941 MRPL53Q96EL3 112 aaKnown RBP12.86□□□□□ -0.35
COPS3-212ENST00000539941 OSTCQ9NRP0 149 aa12.86□□□□□ -0.35
COPS3-212ENST00000539941 SMPXQ9UHP9 88 aa12.86□□□□□ -0.35
COPS3-212ENST00000539941 IGHV4OR15-8A0A075B7B6 117 aa12.85□□□□□ -0.35
COPS3-212ENST00000539941 A0A087WW49 117 aa12.85□□□□□ -0.35
COPS3-212ENST00000539941 M0R3E3 92 aa12.85□□□□□ -0.35
COPS3-212ENST00000539941 IGLV2-11P01706 119 aa12.85□□□□□ -0.35
COPS3-212ENST00000539941 TM4SF20Q53R12 229 aa12.85□□□□□ -0.35
COPS3-212ENST00000539941 TCTEX1D4Q5JR98 221 aa12.85□□□□□ -0.35
COPS3-212ENST00000539941 MRPL54Q6P161 138 aaKnown RBP12.85□□□□□ -0.35
COPS3-212ENST00000539941 Q86TA4 180 aa12.85□□□□□ -0.35
COPS3-212ENST00000539941 MLST8Q9BVC4 326 aa12.85□□□□□ -0.35
COPS3-212ENST00000539941 RHPN1-AS1Q9BWJ2 59 aa12.85□□□□□ -0.35
COPS3-212ENST00000539941 CHEK1O14757 476 aa12.84□□□□□ -0.35
COPS3-212ENST00000539941 MGST1P10620 155 aaKnown RBP12.84□□□□□ -0.35
COPS3-212ENST00000539941 PSG3Q16557 428 aa12.84□□□□□ -0.35
COPS3-212ENST00000539941 C8orf86Q6ZUL3 223 aa12.84□□□□□ -0.35
COPS3-212ENST00000539941 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
COPS3-212ENST00000539941 GTF2H5Q6ZYL4 71 aa12.84□□□□□ -0.35
COPS3-212ENST00000539941 LINC01006Q8NI28 216 aa12.84□□□□□ -0.35
COPS3-212ENST00000539941 GAGE12BA1L429 117 aa12.83□□□□□ -0.35
COPS3-212ENST00000539941 HOXD3P31249 432 aaPredicted RBP12.83□□□□□ -0.35
COPS3-212ENST00000539941 TMEM136Q6ZRR5 245 aa12.83□□□□□ -0.35
COPS3-212ENST00000539941 TSKUQ8WUA8 353 aa12.83□□□□□ -0.35
COPS3-212ENST00000539941 PMCHL2Q9BQD1 86 aa12.83□□□□□ -0.35
COPS3-212ENST00000539941 RNF114Q9Y508 228 aa12.83□□□□□ -0.35
COPS3-212ENST00000539941 TMEM213A2RRL7 107 aa12.83□□□□□ -0.36
COPS3-212ENST00000539941 SAMD13Q5VXD3 122 aa12.83□□□□□ -0.36
COPS3-212ENST00000539941 MDFIQ99750 246 aa12.83□□□□□ -0.36
COPS3-212ENST00000539941 ATRQ13535 2644 aa12.82□□□□□ -0.36
COPS3-212ENST00000539941 TRAV8-1A0A0A6YYK1 113 aa12.82□□□□□ -0.36
COPS3-212ENST00000539941 LINC01619G3V211 115 aa12.82□□□□□ -0.36
COPS3-212ENST00000539941 IBA57Q5T440 356 aaKnown RBP12.82□□□□□ -0.36
COPS3-212ENST00000539941 LCN12Q6JVE5 192 aa12.82□□□□□ -0.36
COPS3-212ENST00000539941 NHLRC2Q8NBF2 726 aa12.82□□□□□ -0.36
COPS3-212ENST00000539941 SGK494Q96LW2 274 aa12.82□□□□□ -0.36
COPS3-212ENST00000539941 PSG8Q9UQ74 426 aa12.82□□□□□ -0.36
COPS3-212ENST00000539941 TRAV8-2A0A0B4J237 113 aa12.81□□□□□ -0.36
COPS3-212ENST00000539941 RBAKDNA6NC62 111 aa12.81□□□□□ -0.36
COPS3-212ENST00000539941 F2Z2F3 143 aa12.81□□□□□ -0.36
COPS3-212ENST00000539941 KLF5Q13887 457 aaPredicted RBP12.81□□□□□ -0.36
COPS3-212ENST00000539941 KHDC1LQ5JSQ8 128 aa12.81□□□□□ -0.36
COPS3-212ENST00000539941 BVES-AS1Q5T3Y7 98 aa12.81□□□□□ -0.36
COPS3-212ENST00000539941 PRNTQ86SH4 94 aa12.81□□□□□ -0.36
COPS3-212ENST00000539941 ZNF492Q9P255 531 aa12.81□□□□□ -0.36
COPS3-212ENST00000539941 V9GYV3 84 aa12.81□□□□□ -0.36
COPS3-212ENST00000539941 G3V4G9 280 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 SMIM17P0DL12 118 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 SYNJ2BPP57105 145 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 DPF1Q92782 380 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 C16orf92Q96LL3 132 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms