RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ZFAND2AQ8N6M9 145 aa10.56□□□□□ -0.72
UBE3B-211ENST00000539843 CMTM2Q8TAZ6 248 aa10.56□□□□□ -0.72
UBE3B-211ENST00000539843 VSIG2Q96IQ7 327 aa10.56□□□□□ -0.72
UBE3B-211ENST00000539843 FAM167A-AS1Q96KT0 104 aa10.56□□□□□ -0.72
UBE3B-211ENST00000539843 MRPL16Q9NX20 251 aaKnown RBP10.56□□□□□ -0.72
UBE3B-211ENST00000539843 TRGV11A0A075B6L2 103 aa10.55□□□□□ -0.72
UBE3B-211ENST00000539843 TRGV4A0A0C4DH28 118 aa10.55□□□□□ -0.72
UBE3B-211ENST00000539843 NXPH4O95158 308 aa10.55□□□□□ -0.72
UBE3B-211ENST00000539843 RANP62826 216 aaKnown RBP10.55□□□□□ -0.72
UBE3B-211ENST00000539843 FAM159AQ6UWV7 190 aa10.55□□□□□ -0.72
UBE3B-211ENST00000539843 NFE4Q86UQ8 179 aa10.55□□□□□ -0.72
UBE3B-211ENST00000539843 KRTAP1-5Q9BYS1 174 aa10.55□□□□□ -0.72
UBE3B-211ENST00000539843 OR5AC2Q9NZP5 309 aa10.55□□□□□ -0.72
UBE3B-211ENST00000539843 HHLA3Q9XRX5 114 aa10.55□□□□□ -0.72
UBE3B-211ENST00000539843 PCLOQ9Y6V0 5065 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 INMT-MINDY4F8WBC2 141 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 SSNA1O43805 119 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 UPK1BO75841 260 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 LINC00315P59091 139 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 ERVFC1-1P60608 527 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 FFAR4Q5NUL3 377 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 Q8TAT8 98 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 FXYD5Q96DB9 178 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 PHYHIPLQ96FC7 376 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 SPXQ9BT56 116 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 LENEPQ9Y5L5 61 aa10.54□□□□□ -0.72
UBE3B-211ENST00000539843 SRIP30626 198 aa10.53□□□□□ -0.72
UBE3B-211ENST00000539843 DEFA1P59665 94 aa10.53□□□□□ -0.72
UBE3B-211ENST00000539843 DEFA3P59666 94 aa10.53□□□□□ -0.72
UBE3B-211ENST00000539843 ZNF266Q14584 549 aa10.53□□□□□ -0.72
UBE3B-211ENST00000539843 NEGR1Q7Z3B1 354 aa10.53□□□□□ -0.72
UBE3B-211ENST00000539843 PPP1R1CQ8WVI7 109 aa10.53□□□□□ -0.72
UBE3B-211ENST00000539843 C8orf49Q96NF6 230 aa10.53□□□□□ -0.72
UBE3B-211ENST00000539843 TP53TG3Q9ULZ0 132 aa10.53□□□□□ -0.72
UBE3B-211ENST00000539843 K7EP13 123 aa10.52□□□□□ -0.73
UBE3B-211ENST00000539843 ORM1P02763 201 aa10.52□□□□□ -0.73
UBE3B-211ENST00000539843 CRYBA4P53673 196 aa10.52□□□□□ -0.73
UBE3B-211ENST00000539843 MUC21Q5SSG8 566 aa10.52□□□□□ -0.73
UBE3B-211ENST00000539843 PRR9Q5T870 116 aa10.52□□□□□ -0.73
UBE3B-211ENST00000539843 HYLS1Q96M11 299 aa10.52□□□□□ -0.73
UBE3B-211ENST00000539843 HSPB11Q9Y547 144 aa10.52□□□□□ -0.73
UBE3B-211ENST00000539843 A0A1W2PPV4 95 aa10.51□□□□□ -0.73
UBE3B-211ENST00000539843 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
UBE3B-211ENST00000539843 TMED6Q8WW62 240 aa10.51□□□□□ -0.73
UBE3B-211ENST00000539843 TXNDC17Q9BRA2 123 aa10.51□□□□□ -0.73
UBE3B-211ENST00000539843 NAGKQ9UJ70 344 aa10.51□□□□□ -0.73
UBE3B-211ENST00000539843 RPH3ALQ9UNE2 315 aa10.51□□□□□ -0.73
UBE3B-211ENST00000539843 LY96Q9Y6Y9 160 aa10.51□□□□□ -0.73
UBE3B-211ENST00000539843 C9JCJ5 164 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 DIRC3C9JPN6 131 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 EVI2AP22794 236 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 RPL12P30050 165 aaKnown RBP10.5□□□□□ -0.73
UBE3B-211ENST00000539843 TMEM183BQ1AE95 376 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 Q6AWC8 147 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 PQLC2Q6ZP29 291 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 TMEM183AQ8IXX5 376 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 Q8N1X5 172 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 OTORQ9NRC9 128 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
UBE3B-211ENST00000539843 H0YIZ8 118 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 MPC2O95563 127 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 FHL2Q14192 279 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 CDPF1Q6NVV7 123 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 LYPD5Q6UWN5 251 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 SH2D6Q7Z4S9 175 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 OR10G4Q8NGN3 311 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 SMIM3Q9BZL3 60 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 SCRT2Q9NQ03 307 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 RYR1P21817 5038 aa10.49□□□□□ -0.73
UBE3B-211ENST00000539843 TRAV21A0A0B4J279 112 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 PGPA6NDG6 321 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 GYPEP15421 78 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 H2BFSP57053 126 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 IQCF2Q8IXL9 164 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 C10orf126Q8N4M7 172 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 OR4C5Q8NGB2 326 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 RASL10AQ92737 203 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 KCNS1Q96KK3 526 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 MARVELD1Q9BSK0 173 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 MBD2Q9UBB5 411 aa10.48□□□□□ -0.73
UBE3B-211ENST00000539843 TRAV4A0A0B4J268 109 aa10.47□□□□□ -0.73
UBE3B-211ENST00000539843 K7EQD1 137 aa10.47□□□□□ -0.73
UBE3B-211ENST00000539843 KRTAP10-2P60368 255 aa10.47□□□□□ -0.73
UBE3B-211ENST00000539843 ARL6IP6Q8N6S5 226 aa10.47□□□□□ -0.73
UBE3B-211ENST00000539843 SDF2L1Q9HCN8 221 aa10.47□□□□□ -0.73
UBE3B-211ENST00000539843 MDFICQ9P1T7 246 aa10.47□□□□□ -0.73
UBE3B-211ENST00000539843 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
UBE3B-211ENST00000539843 SERTM2A0A1B0GWG4 89 aa10.46□□□□□ -0.73
UBE3B-211ENST00000539843 K7EQM0 130 aa10.46□□□□□ -0.73
UBE3B-211ENST00000539843 M0R2P5 195 aa10.46□□□□□ -0.73
UBE3B-211ENST00000539843 SFTA3P0C7M3 94 aa10.46□□□□□ -0.73
UBE3B-211ENST00000539843 Q6ZQT7 251 aa10.46□□□□□ -0.73
UBE3B-211ENST00000539843 GOLT1AQ6ZVE7 132 aa10.46□□□□□ -0.73
UBE3B-211ENST00000539843 ZNF479Q96JC4 524 aa10.46□□□□□ -0.73
UBE3B-211ENST00000539843 KRTAP4-5Q9BYR2 181 aa10.46□□□□□ -0.73
UBE3B-211ENST00000539843 TREM1Q9NP99 234 aa10.46□□□□□ -0.73
UBE3B-211ENST00000539843 PPT1P50897 306 aa10.45□□□□□ -0.74
UBE3B-211ENST00000539843 TDRG1Q3Y452 100 aa10.45□□□□□ -0.74
UBE3B-211ENST00000539843 NHLRC2Q8NBF2 726 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms