RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 MAP1LC3B2A6NCE7 125 aa10.56□□□□□ -0.72
USB1-203ENST00000539737 PGPA6NDG6 321 aa10.56□□□□□ -0.72
USB1-203ENST00000539737 DIRC3C9JPN6 131 aa10.56□□□□□ -0.72
USB1-203ENST00000539737 H7BYZ3 331 aa10.56□□□□□ -0.72
USB1-203ENST00000539737 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
USB1-203ENST00000539737 MAP1LC3BQ9GZQ8 125 aa10.56□□□□□ -0.72
USB1-203ENST00000539737 AGPAT4-IT1Q9H0P7 198 aa10.56□□□□□ -0.72
USB1-203ENST00000539737 YTHDF2Q9Y5A9 579 aaKnown RBP10.56□□□□□ -0.72
USB1-203ENST00000539737 SERTM2A0A1B0GWG4 89 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 C16orf90A8MZG2 172 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 PRM2P04554 102 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 NMBP08949 121 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 CRISP2P16562 243 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 ZNF138P52744 262 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 TAS2R60P59551 318 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 EIF5AL1Q6IS14 154 aaKnown RBP10.55□□□□□ -0.72
USB1-203ENST00000539737 DPPA3Q6W0C5 159 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 FAM19A4Q96LR4 140 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 LINC01587Q99440 93 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 VGLL1Q99990 258 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 RPH3ALQ9UNE2 315 aa10.55□□□□□ -0.72
USB1-203ENST00000539737 A0A1W2PRE2 83 aa10.54□□□□□ -0.72
USB1-203ENST00000539737 C7orf71A4D174 169 aa10.54□□□□□ -0.72
USB1-203ENST00000539737 KLLNB2CW77 178 aa10.54□□□□□ -0.72
USB1-203ENST00000539737 J3KRW8 73 aa10.54□□□□□ -0.72
USB1-203ENST00000539737 LGALSLQ3ZCW2 172 aaPredicted RBP10.54□□□□□ -0.72
USB1-203ENST00000539737 ZFP69Q49AA0 526 aa10.54□□□□□ -0.72
USB1-203ENST00000539737 C1orf134Q5TEV5 83 aa10.54□□□□□ -0.72
USB1-203ENST00000539737 TMEM88Q6PEY1 159 aa10.54□□□□□ -0.72
USB1-203ENST00000539737 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
USB1-203ENST00000539737 LENEPQ9Y5L5 61 aa10.54□□□□□ -0.72
USB1-203ENST00000539737 LYRM9A8MSI8 78 aa10.53□□□□□ -0.72
USB1-203ENST00000539737 KIR3DS1Q14943 382 aa10.53□□□□□ -0.72
USB1-203ENST00000539737 GOLT1AQ6ZVE7 132 aa10.53□□□□□ -0.72
USB1-203ENST00000539737 Q8TAT8 98 aa10.53□□□□□ -0.72
USB1-203ENST00000539737 FAM213BQ8TBF2 198 aa10.53□□□□□ -0.72
USB1-203ENST00000539737 C16orf74Q96GX8 76 aa10.53□□□□□ -0.72
USB1-203ENST00000539737 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
USB1-203ENST00000539737 ZNF705GA8MUZ8 300 aaPredicted RBP10.52□□□□□ -0.73
USB1-203ENST00000539737 GGTLC3B5MD39 225 aa10.52□□□□□ -0.73
USB1-203ENST00000539737 K7EQM0 130 aa10.52□□□□□ -0.73
USB1-203ENST00000539737 GPX1P07203 203 aa10.52□□□□□ -0.73
USB1-203ENST00000539737 FGF8P55075 233 aaPredicted RBP10.52□□□□□ -0.73
USB1-203ENST00000539737 ZNF493Q6ZR52 646 aa10.52□□□□□ -0.73
USB1-203ENST00000539737 SLC51BQ86UW2 128 aa10.52□□□□□ -0.73
USB1-203ENST00000539737 NKX6-2Q9C056 277 aaPredicted RBP10.52□□□□□ -0.73
USB1-203ENST00000539737 TRAV12-3A0A0B4J271 114 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 TCRAP04437 139 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 FHITP49789 147 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 RAB5CP51148 216 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 GNG5P63218 68 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 BTN1A1Q13410 526 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 CCDC28AQ8IWP9 274 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 C9orf62Q8N4C0 152 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 ZFAND2AQ8N6M9 145 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 TMEM263Q8WUH6 116 aaKnown RBP10.51□□□□□ -0.73
USB1-203ENST00000539737 PYGO2Q9BRQ0 406 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 ARL2-SNX15V9GYD0 113 aa10.51□□□□□ -0.73
USB1-203ENST00000539737 FBLL1A6NHQ2 334 aaKnown RBP10.5□□□□□ -0.73
USB1-203ENST00000539737 HTN1P15515 57 aa10.5□□□□□ -0.73
USB1-203ENST00000539737 RNASE4P34096 147 aaKnown RBP10.5□□□□□ -0.73
USB1-203ENST00000539737 SUMO1P63165 101 aaKnown RBP10.5□□□□□ -0.73
USB1-203ENST00000539737 CD300CQ08708 224 aa10.5□□□□□ -0.73
USB1-203ENST00000539737 CYB561D1Q8N8Q1 229 aa10.5□□□□□ -0.73
USB1-203ENST00000539737 C15orf53Q8NAA6 179 aa10.5□□□□□ -0.73
USB1-203ENST00000539737 MBD3L1Q8WWY6 194 aa10.5□□□□□ -0.73
USB1-203ENST00000539737 ATG101Q9BSB4 218 aa10.5□□□□□ -0.73
USB1-203ENST00000539737 NDFIP1Q9BT67 221 aa10.5□□□□□ -0.73
USB1-203ENST00000539737 TMPRSS5Q9H3S3 457 aa10.5□□□□□ -0.73
USB1-203ENST00000539737 FAM74A7A6NL05 159 aa10.49□□□□□ -0.73
USB1-203ENST00000539737 DEFB130BP0DP73 79 aa10.49□□□□□ -0.73
USB1-203ENST00000539737 DEFB130AP0DP74 79 aa10.49□□□□□ -0.73
USB1-203ENST00000539737 UBE2G2P60604 165 aa10.49□□□□□ -0.73
USB1-203ENST00000539737 RNASE8Q8TDE3 154 aaKnown RBP10.49□□□□□ -0.73
USB1-203ENST00000539737 SFT2D1Q8WV19 159 aa10.49□□□□□ -0.73
USB1-203ENST00000539737 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
USB1-203ENST00000539737 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
USB1-203ENST00000539737 EPDR1Q9UM22 224 aa10.49□□□□□ -0.73
USB1-203ENST00000539737 FAT1Q14517 4588 aa10.48□□□□□ -0.73
USB1-203ENST00000539737 ZNF324O75467 553 aaPredicted RBP10.48□□□□□ -0.73
USB1-203ENST00000539737 IFNA7P01567 189 aa10.48□□□□□ -0.73
USB1-203ENST00000539737 H2AFB1P0C5Y9 115 aa10.48□□□□□ -0.73
USB1-203ENST00000539737 PPT1P50897 306 aa10.48□□□□□ -0.73
USB1-203ENST00000539737 RNF212Q495C1 297 aa10.48□□□□□ -0.73
USB1-203ENST00000539737 SOHLH1Q5JUK2 328 aa10.48□□□□□ -0.73
USB1-203ENST00000539737 PRR9Q5T870 116 aa10.48□□□□□ -0.73
USB1-203ENST00000539737 TMEM75Q8N9X5 138 aa10.48□□□□□ -0.73
USB1-203ENST00000539737 ZNF680Q8NEM1 530 aa10.48□□□□□ -0.73
USB1-203ENST00000539737 TIMM8BQ9Y5J9 83 aaPredicted RBP10.48□□□□□ -0.73
USB1-203ENST00000539737 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
USB1-203ENST00000539737 PLAC8L1A1L4L8 177 aa10.47□□□□□ -0.73
USB1-203ENST00000539737 RGS13O14921 159 aa10.47□□□□□ -0.73
USB1-203ENST00000539737 AZU1P20160 251 aa10.47□□□□□ -0.73
USB1-203ENST00000539737 EIF4E3Q8N5X7 224 aaKnown RBP10.47□□□□□ -0.73
USB1-203ENST00000539737 HIST1H2BAQ96A08 127 aa10.47□□□□□ -0.73
USB1-203ENST00000539737 SCRT2Q9NQ03 307 aa10.47□□□□□ -0.73
USB1-203ENST00000539737 CBY3A6NI87 242 aa10.46□□□□□ -0.73
USB1-203ENST00000539737 SNURFLB1AK76 121 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms