RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 A0A1B0GWB2 263 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 F8W735 103 aaPredicted RBP13.66□□□□□ -0.22
RAB40C-205ENST00000539661 TIMM23O14925 209 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 GOSR1O95249 250 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 RRN3P1Q2M238 152 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 ZNF672Q499Z4 452 aaPredicted RBP13.66□□□□□ -0.22
RAB40C-205ENST00000539661 SPAG8Q99932 426 aaPredicted RBP13.66□□□□□ -0.22
RAB40C-205ENST00000539661 VPS13CQ709C8 3753 aa13.66□□□□□ -0.22
RAB40C-205ENST00000539661 H3BMG7 143 aa13.65□□□□□ -0.22
RAB40C-205ENST00000539661 LAGE3Q14657 143 aa13.65□□□□□ -0.22
RAB40C-205ENST00000539661 MAPKAPK5-AS1Q8N8E1 139 aa13.65□□□□□ -0.22
RAB40C-205ENST00000539661 C21orf62Q9NYP8 219 aa13.65□□□□□ -0.22
RAB40C-205ENST00000539661 ZFHX3Q15911 3703 aa13.65□□□□□ -0.22
RAB40C-205ENST00000539661 SMAD5-AS1Q9Y6J3 95 aa13.65□□□□□ -0.22
RAB40C-205ENST00000539661 RBAKDNA6NC62 111 aa13.64□□□□□ -0.23
RAB40C-205ENST00000539661 NCBP2LA6PVI3 153 aaKnown RBP13.64□□□□□ -0.23
RAB40C-205ENST00000539661 PRB3Q04118 309 aaPredicted RBP13.64□□□□□ -0.23
RAB40C-205ENST00000539661 HIST1H4GQ99525 98 aa13.64□□□□□ -0.23
RAB40C-205ENST00000539661 PRO0461Q9UI25 63 aa13.64□□□□□ -0.23
RAB40C-205ENST00000539661 ETDBQ3ZM63 59 aa13.64□□□□□ -0.23
RAB40C-205ENST00000539661 IGF2-ASQ6U949 168 aa13.64□□□□□ -0.23
RAB40C-205ENST00000539661 IL17RELQ6ZVW7 336 aa13.64□□□□□ -0.23
RAB40C-205ENST00000539661 S4R3C0 116 aa13.64□□□□□ -0.23
RAB40C-205ENST00000539661 TRBV7-3A0A075B6L6 115 aa13.63□□□□□ -0.23
RAB40C-205ENST00000539661 GATA1P15976 413 aaPredicted RBP13.63□□□□□ -0.23
RAB40C-205ENST00000539661 CCDC144NLQ6NUI1 221 aa13.63□□□□□ -0.23
RAB40C-205ENST00000539661 ABCA4P78363 2273 aa13.63□□□□□ -0.23
RAB40C-205ENST00000539661 TCTEX1D4Q5JR98 221 aa13.63□□□□□ -0.23
RAB40C-205ENST00000539661 TRAV12-1A0A0B4J245 112 aa13.62□□□□□ -0.23
RAB40C-205ENST00000539661 SH2D6Q7Z4S9 175 aa13.62□□□□□ -0.23
RAB40C-205ENST00000539661 A0A0G2JNJ9 132 aa13.62□□□□□ -0.23
RAB40C-205ENST00000539661 TMEM238LA0A1B0GVL6 79 aa13.62□□□□□ -0.23
RAB40C-205ENST00000539661 Q9UFV3 132 aa13.62□□□□□ -0.23
RAB40C-205ENST00000539661 NRACQ8N912 160 aa13.61□□□□□ -0.23
RAB40C-205ENST00000539661 CFHR4Q92496 578 aa13.61□□□□□ -0.23
RAB40C-205ENST00000539661 MAP1AP78559 2803 aaPredicted RBP13.61□□□□□ -0.23
RAB40C-205ENST00000539661 C5orf64Q2M2E5 130 aa13.61□□□□□ -0.23
RAB40C-205ENST00000539661 DPM3Q9P2X0 92 aa13.61□□□□□ -0.23
RAB40C-205ENST00000539661 HLA-DMBP28068 263 aa13.6□□□□□ -0.23
RAB40C-205ENST00000539661 DYNAPQ8N1N2 210 aa13.6□□□□□ -0.23
RAB40C-205ENST00000539661 E7EQL1 145 aa13.6□□□□□ -0.23
RAB40C-205ENST00000539661 H7C1H1 209 aa13.6□□□□□ -0.23
RAB40C-205ENST00000539661 ATP6V0E2Q8NHE4 81 aa13.6□□□□□ -0.23
RAB40C-205ENST00000539661 F8VRH5 84 aa13.6□□□□□ -0.23
RAB40C-205ENST00000539661 RAB9AP51151 201 aa13.6□□□□□ -0.23
RAB40C-205ENST00000539661 MYMXA0A1B0GTQ4 84 aa13.59□□□□□ -0.23
RAB40C-205ENST00000539661 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.59□□□□□ -0.23
RAB40C-205ENST00000539661 K7EMI3 77 aa13.59□□□□□ -0.23
RAB40C-205ENST00000539661 PRRG2O14669 202 aa13.59□□□□□ -0.23
RAB40C-205ENST00000539661 CTSGP08311 255 aa13.59□□□□□ -0.23
RAB40C-205ENST00000539661 IGFL4Q6B9Z1 124 aa13.59□□□□□ -0.23
RAB40C-205ENST00000539661 AMTNQ6UX39 209 aa13.59□□□□□ -0.23
RAB40C-205ENST00000539661 OR11H6Q8NGC7 330 aa13.59□□□□□ -0.23
RAB40C-205ENST00000539661 IGHV4-4A0A075B6R2 117 aa13.58□□□□□ -0.24
RAB40C-205ENST00000539661 IGKV3D-20A0A0C4DH25 116 aa13.58□□□□□ -0.24
RAB40C-205ENST00000539661 OR11H12B2RN74 326 aa13.58□□□□□ -0.24
RAB40C-205ENST00000539661 ERCC8Q13216 396 aa13.58□□□□□ -0.24
RAB40C-205ENST00000539661 OR11H1Q8NG94 326 aa13.58□□□□□ -0.24
RAB40C-205ENST00000539661 OR11H2Q8NH07 326 aa13.58□□□□□ -0.24
RAB40C-205ENST00000539661 B9A039 149 aa13.58□□□□□ -0.24
RAB40C-205ENST00000539661 PPIFP30405 207 aaKnown RBP13.58□□□□□ -0.24
RAB40C-205ENST00000539661 TRGV3P03979 118 aa13.57□□□□□ -0.24
RAB40C-205ENST00000539661 CKS1BP61024 79 aa13.57□□□□□ -0.24
RAB40C-205ENST00000539661 LY6G5BQ8NDX9 201 aa13.57□□□□□ -0.24
RAB40C-205ENST00000539661 SLC50A1Q9BRV3 221 aa13.57□□□□□ -0.24
RAB40C-205ENST00000539661 HOXA3O43365 443 aaPredicted RBP13.57□□□□□ -0.24
RAB40C-205ENST00000539661 ONECUT1Q9UBC0 465 aa13.57□□□□□ -0.24
RAB40C-205ENST00000539661 SLC25A16P16260 332 aa13.56□□□□□ -0.24
RAB40C-205ENST00000539661 PRR30Q53SZ7 412 aaPredicted RBP13.56□□□□□ -0.24
RAB40C-205ENST00000539661 MRAP2Q96G30 205 aa13.56□□□□□ -0.24
RAB40C-205ENST00000539661 PRAC2D3DTV9 90 aa13.56□□□□□ -0.24
RAB40C-205ENST00000539661 APOMO95445 188 aa13.56□□□□□ -0.24
RAB40C-205ENST00000539661 AKAP6Q13023 2319 aa13.56□□□□□ -0.24
RAB40C-205ENST00000539661 SPTAN1Q13813 2472 aaKnown RBP13.55□□□□□ -0.24
RAB40C-205ENST00000539661 IGHV7-4-1A0A0J9YVY3 117 aa13.55□□□□□ -0.24
RAB40C-205ENST00000539661 MORN3Q6PF18 240 aaPredicted RBP13.55□□□□□ -0.24
RAB40C-205ENST00000539661 C1QTNF4Q9BXJ3 329 aa13.55□□□□□ -0.24
RAB40C-205ENST00000539661 SPTBN1Q01082 2364 aaKnown RBP13.55□□□□□ -0.24
RAB40C-205ENST00000539661 A6NJY4 79 aa13.55□□□□□ -0.24
RAB40C-205ENST00000539661 ORMDL2Q53FV1 153 aa13.55□□□□□ -0.24
RAB40C-205ENST00000539661 MTURNQ8N3F0 131 aa13.55□□□□□ -0.24
RAB40C-205ENST00000539661 CELSR1Q9NYQ6 3014 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 AGRNO00468 2067 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 FOXI1Q12951 378 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 HES1Q14469 280 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 LCNL1Q6ZST4 164 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 C11orf21Q9P2W6 132 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 IGHV3-23P01764 117 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 EFNA4P52798 201 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 FOXC1Q12948 553 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 DLX4Q92988 240 aaPredicted RBP13.54□□□□□ -0.24
RAB40C-205ENST00000539661 SMIM2Q9BVW6 85 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 HIF1ANQ9NWT6 349 aa13.54□□□□□ -0.24
RAB40C-205ENST00000539661 NDPQ00604 133 aa13.53□□□□□ -0.24
RAB40C-205ENST00000539661 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
RAB40C-205ENST00000539661 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.53□□□□□ -0.24
RAB40C-205ENST00000539661 MRPL53Q96EL3 112 aaKnown RBP13.53□□□□□ -0.24
RAB40C-205ENST00000539661 MRPL16Q9NX20 251 aaKnown RBP13.53□□□□□ -0.24
RAB40C-205ENST00000539661 INSL3P51460 131 aa13.53□□□□□ -0.24
RAB40C-205ENST00000539661 KLRD1Q13241 179 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms