RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 IGLL1P15814 213 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 ZNF138P52744 262 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 BTN1A1Q13410 526 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 PRR27Q6MZM9 219 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 TMEM88Q6PEY1 159 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 CBLN2Q8IUK8 224 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 APRG1Q8IVJ8 170 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 NUDT10Q8NFP7 164 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 NUDT11Q96G61 164 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 FAM19A4Q96LR4 140 aa6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 SPAG8Q99932 426 aaPredicted RBP6.79□□□□□ -1.32
RTN4IP1-204ENST00000539449 C19orf71A6NCJ1 209 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 OR4C46A6NHA9 309 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 J3KRW8 73 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 SNRPD3P62318 126 aaKnown RBP6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 RHEBQ15382 184 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 C9orf66Q5T8R8 295 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 SAMD13Q5VXD3 122 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 ZFAND2AQ8N6M9 145 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 OR10G8Q8NGN5 311 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 OR2K2Q8NGT1 345 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 OR10J6PQ8NGY7 276 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 LINC00477Q96M19 166 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 WFDC10AQ9H1F0 79 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 SAV1Q9H4B6 383 aaPredicted RBP6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 C19orf73Q9NVV2 129 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 ZFP30Q9Y2G7 519 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 V9GYV3 84 aa6.78□□□□□ -1.32
RTN4IP1-204ENST00000539449 B4DEV8 164 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 CA1P00915 261 aaPredicted RBP6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 FXYD7P58549 80 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 RPL19P84098 196 aaKnown RBP6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 TMEM78Q5T7P6 136 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 FOXI2Q6ZQN5 318 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 COX8CQ7Z4L0 72 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 ZNF575Q86XF7 245 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 SFRP2Q96HF1 295 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 OSTCQ9NRP0 149 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 PPP1R14DQ9NXH3 145 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 C11orf21Q9P2W6 132 aa6.77□□□□□ -1.33
RTN4IP1-204ENST00000539449 A0A087WWC5 75 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 FBLL1A6NHQ2 334 aaKnown RBP6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 H3BMM0 161 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 GATCO43716 136 aaKnown RBP6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 SH2D1AO60880 128 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 MT-ND4LP03901 98 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 ERVFC1-1P60608 527 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 ACTL10Q5JWF8 245 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 SAPCD1Q5SSQ6 148 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 EBLN2Q6P2I7 272 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 FAM231DQ6ZW35 169 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 OR4B1Q8NGF8 309 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 SMIM12Q96EX1 92 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 YPEL4Q96NS1 127 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 LYSTQ99698 3801 aa6.76□□□□□ -1.33
RTN4IP1-204ENST00000539449 A8MTW9 85 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 H7BYZ3 331 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 PFN1P07737 140 aaKnown RBP6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 GZMBP10144 247 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 HLA-DRB4P13762 266 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 SMUG1Q53HV7 270 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 IBA57Q5T440 356 aaKnown RBP6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 ANAPC16Q96DE5 110 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 NDFIP1Q9BT67 221 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 CTDSP1Q9GZU7 261 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 HLA-DRB4X5D2U9 266 aa6.75□□□□□ -1.33
RTN4IP1-204ENST00000539449 TRAV12-2A0A075B6T6 113 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 TMSB15BA0A087X1C1 80 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 COLCA2A8K830 154 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 ZNF705GA8MUZ8 300 aaPredicted RBP6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 OR11H12B2RN74 326 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 M0R2Z0 102 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 DUSP14O95147 198 aaKnown RBP6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 CXCL1P09341 107 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 CRISP2P16562 243 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 RNASE4P34096 147 aaKnown RBP6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 INSL3P51460 131 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 TCL1AP56279 114 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 FAM3BP58499 235 aaPredicted RBP6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 SPINK13Q1W4C9 94 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 Q8N1Y9 231 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 SMCO4Q9NRQ5 59 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 LENEPQ9Y5L5 61 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 URGCP-MRPS24S4R325 110 aa6.74□□□□□ -1.33
RTN4IP1-204ENST00000539449 TGIF2-C20orf24A0A0A6YYL0 155 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 IGKV3D-20A0A0C4DH25 116 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 KLLNB2CW77 178 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 PPP1R2P9O14990 202 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 CRXO43186 299 aaPredicted RBP6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 GPX1P07203 203 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 FRMD6-AS1P0C7T7 363 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 RBMY1A1P0DJD3 496 aaKnown RBP6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 RBMY1CP0DJD4 496 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 KRTAP10-11P60412 298 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 ELOBQ15370 118 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 RBMY1FQ15415 496 aaKnown RBP6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 DEFB125Q8N687 156 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms