RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 IGHV4OR15-8A0A075B7B6 117 aa19.33■□□□□ 0.68
KLHL42-202ENST00000539176 A0A087WW49 117 aa19.33■□□□□ 0.68
KLHL42-202ENST00000539176 DEFB136Q30KP8 78 aa19.33■□□□□ 0.68
KLHL42-202ENST00000539176 RNF182Q8N6D2 247 aa19.32■□□□□ 0.68
KLHL42-202ENST00000539176 CD28P10747 220 aa19.31■□□□□ 0.68
KLHL42-202ENST00000539176 PPP1R14DQ9NXH3 145 aa19.31■□□□□ 0.68
KLHL42-202ENST00000539176 NDUFA7O95182 113 aa19.31■□□□□ 0.68
KLHL42-202ENST00000539176 EDN2P20800 178 aa19.3■□□□□ 0.68
KLHL42-202ENST00000539176 C16orf92Q96LL3 132 aa19.3■□□□□ 0.68
KLHL42-202ENST00000539176 DAZ1Q9NQZ3 744 aaKnown RBP19.3■□□□□ 0.68
KLHL42-202ENST00000539176 SETD2Q9BYW2 2564 aaPredicted RBP19.29■□□□□ 0.68
KLHL42-202ENST00000539176 PRAC2D3DTV9 90 aa19.29■□□□□ 0.68
KLHL42-202ENST00000539176 GPX1P07203 203 aa19.29■□□□□ 0.68
KLHL42-202ENST00000539176 PRB4P10163 310 aaPredicted RBP19.29■□□□□ 0.68
KLHL42-202ENST00000539176 TM4SF20Q53R12 229 aa19.29■□□□□ 0.68
KLHL42-202ENST00000539176 TMEM78Q5T7P6 136 aa19.29■□□□□ 0.68
KLHL42-202ENST00000539176 RCHY1Q96PM5 261 aa19.29■□□□□ 0.68
KLHL42-202ENST00000539176 K7EMT4 169 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 ZNF324O75467 553 aaPredicted RBP19.28■□□□□ 0.68
KLHL42-202ENST00000539176 ARMS2P0C7Q2 107 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 C9orf47Q6ZRZ4 202 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 DUX3Q96PT4 197 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 LOC102724200A0A096LPH7 203 aaPredicted RBP19.28■□□□□ 0.68
KLHL42-202ENST00000539176 FABP5P3A8MUU1 101 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 ZNF138P52744 262 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 FAM106AQ4KMX7 169 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 DMRTA1Q5VZB9 504 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 RNF114Q9Y508 228 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 SELENOKQ9Y6D0 94 aa19.28■□□□□ 0.68
KLHL42-202ENST00000539176 IGHV7-4-1A0A0J9YVY3 117 aa19.27■□□□□ 0.68
KLHL42-202ENST00000539176 A0A1W2PRX2 142 aa19.27■□□□□ 0.68
KLHL42-202ENST00000539176 KLHL30-AS1Q8NEE0 82 aa19.27■□□□□ 0.68
KLHL42-202ENST00000539176 LENEPQ9Y5L5 61 aa19.27■□□□□ 0.68
KLHL42-202ENST00000539176 AMTP48728 403 aa19.26■□□□□ 0.67
KLHL42-202ENST00000539176 PKIAP61925 76 aa19.26■□□□□ 0.67
KLHL42-202ENST00000539176 ERCC8Q13216 396 aa19.26■□□□□ 0.67
KLHL42-202ENST00000539176 Q6ZWC4 215 aa19.26■□□□□ 0.67
KLHL42-202ENST00000539176 GPHB5Q86YW7 130 aa19.26■□□□□ 0.67
KLHL42-202ENST00000539176 TSTD3H0UI37 97 aa19.26■□□□□ 0.67
KLHL42-202ENST00000539176 CTRLP40313 264 aa19.26■□□□□ 0.67
KLHL42-202ENST00000539176 SAMD13Q5VXD3 122 aa19.26■□□□□ 0.67
KLHL42-202ENST00000539176 C4orf3Q8WVX3 66 aa19.26■□□□□ 0.67
KLHL42-202ENST00000539176 HOXD3P31249 432 aaPredicted RBP19.25■□□□□ 0.67
KLHL42-202ENST00000539176 ZNF80P51504 273 aaPredicted RBP19.25■□□□□ 0.67
KLHL42-202ENST00000539176 ZNF493Q6ZR52 646 aa19.25■□□□□ 0.67
KLHL42-202ENST00000539176 CITED2Q99967 270 aaPredicted RBP19.25■□□□□ 0.67
KLHL42-202ENST00000539176 AGPAT4-IT1Q9H0P7 198 aa19.25■□□□□ 0.67
KLHL42-202ENST00000539176 NRN1Q9NPD7 142 aa19.25■□□□□ 0.67
KLHL42-202ENST00000539176 SOCS3O14543 225 aa19.24■□□□□ 0.67
KLHL42-202ENST00000539176 SLURP1P55000 103 aa19.24■□□□□ 0.67
KLHL42-202ENST00000539176 SYNJ2BPP57105 145 aa19.24■□□□□ 0.67
KLHL42-202ENST00000539176 HIST1H1AQ02539 215 aaPredicted RBP19.24■□□□□ 0.67
KLHL42-202ENST00000539176 LINC01559Q495D7 138 aa19.24■□□□□ 0.67
KLHL42-202ENST00000539176 NAGKQ9UJ70 344 aa19.24■□□□□ 0.67
KLHL42-202ENST00000539176 SCGB1D1O95968 90 aa19.24■□□□□ 0.67
KLHL42-202ENST00000539176 PROK1P58294 105 aa19.24■□□□□ 0.67
KLHL42-202ENST00000539176 UFC1Q9Y3C8 167 aa19.24■□□□□ 0.67
KLHL42-202ENST00000539176 LINC00587B1AMM8 73 aa19.23■□□□□ 0.67
KLHL42-202ENST00000539176 LYZL1Q6UWQ5 148 aa19.23■□□□□ 0.67
KLHL42-202ENST00000539176 TPPP3Q9BW30 176 aa19.23■□□□□ 0.67
KLHL42-202ENST00000539176 C2CD3Q4AC94 2353 aa19.23■□□□□ 0.67
KLHL42-202ENST00000539176 IGLC6P0CF74 106 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 PMCHP20382 165 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 FER1L6-AS1Q8NA97 138 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 OR11H1Q8NG94 326 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 RHPN1-AS1Q9BWJ2 59 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 SMPXQ9UHP9 88 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 TMSB15BA0A087X1C1 80 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 OVOL1O14753 267 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 HSBP1O75506 76 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 ZNF738Q8NE65 137 aa19.22■□□□□ 0.67
KLHL42-202ENST00000539176 OR1N2Q8NGR9 330 aa19.21■□□□□ 0.67
KLHL42-202ENST00000539176 CHCHD1Q96BP2 118 aaKnown RBP19.2■□□□□ 0.66
KLHL42-202ENST00000539176 LINC01619G3V211 115 aa19.2■□□□□ 0.66
KLHL42-202ENST00000539176 ORM1P02763 201 aa19.2■□□□□ 0.66
KLHL42-202ENST00000539176 KRTAP10-3P60369 221 aa19.2■□□□□ 0.66
KLHL42-202ENST00000539176 LINC00477Q96M19 166 aa19.2■□□□□ 0.66
KLHL42-202ENST00000539176 CNFNQ9BYD5 112 aa19.2■□□□□ 0.66
KLHL42-202ENST00000539176 TMEM213A2RRL7 107 aa19.19■□□□□ 0.66
KLHL42-202ENST00000539176 DPF1Q92782 380 aa19.19■□□□□ 0.66
KLHL42-202ENST00000539176 TEP1Q99973 2627 aaKnown RBP19.19■□□□□ 0.66
KLHL42-202ENST00000539176 OR10J6PQ8NGY7 276 aa19.18■□□□□ 0.66
KLHL42-202ENST00000539176 RNASEKQ6P5S7 137 aaKnown RBP19.18■□□□□ 0.66
KLHL42-202ENST00000539176 REC114Q7Z4M0 266 aa19.18■□□□□ 0.66
KLHL42-202ENST00000539176 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.18■□□□□ 0.66
KLHL42-202ENST00000539176 RAX2Q96IS3 184 aa19.18■□□□□ 0.66
KLHL42-202ENST00000539176 C20orf173Q96LM9 149 aa19.18■□□□□ 0.66
KLHL42-202ENST00000539176 TSSC4Q9Y5U2 329 aaPredicted RBP19.17■□□□□ 0.66
KLHL42-202ENST00000539176 RPL11P62913 178 aaKnown RBP19.16■□□□□ 0.66
KLHL42-202ENST00000539176 NIT1Q86X76 327 aa19.16■□□□□ 0.66
KLHL42-202ENST00000539176 TRBV7-9A0A0J9YWB2 115 aa19.16■□□□□ 0.66
KLHL42-202ENST00000539176 RAB4AP20338 218 aa19.16■□□□□ 0.66
KLHL42-202ENST00000539176 NIPBLQ6KC79 2804 aaeCLIP19.15■□□□□ 0.66
KLHL42-202ENST00000539176 IGKV3-7A0A075B6H7 116 aa19.15■□□□□ 0.66
KLHL42-202ENST00000539176 LGALS9O00182 355 aa19.15■□□□□ 0.66
KLHL42-202ENST00000539176 ZNF664Q8N3J9 261 aa19.15■□□□□ 0.66
KLHL42-202ENST00000539176 NTF3P20783 257 aa19.14■□□□□ 0.65
KLHL42-202ENST00000539176 FAM104BQ5XKR9 115 aa19.14■□□□□ 0.65
KLHL42-202ENST00000539176 TEX43Q6ZNM6 134 aa19.14■□□□□ 0.65
KLHL42-202ENST00000539176 DLX4Q92988 240 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms