RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 ZNF56Q15929 161 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 MLANAQ16655 118 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 DUX4L9Q6RFH8 374 aaPredicted RBP8.67□□□□□ -1.02
DDX11-213ENST00000539049 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
DDX11-213ENST00000539049 PRNDQ9UKY0 176 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 NPIPB3Q92617 1050 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 SMKR1H3BMG3 65 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 UQCRQO14949 82 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 RPS28P62857 69 aaKnown RBP8.67□□□□□ -1.02
DDX11-213ENST00000539049 SRSF2Q01130 221 aaKnown RBP8.67□□□□□ -1.02
DDX11-213ENST00000539049 PAX8Q06710 450 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 FOXF2Q12947 444 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 SCGB1D4Q6XE38 83 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 FXYD5Q96DB9 178 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 MSRB2Q9Y3D2 182 aa8.67□□□□□ -1.02
DDX11-213ENST00000539049 RBAKDNA6NC62 111 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 LINC01619G3V211 115 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 C15orf65H3BRN8 121 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 M0R2P5 195 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 DLL1O00548 723 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 PMVKQ15126 192 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 FAM104BQ5XKR9 115 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 HRCT1Q6UXD1 115 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 ASCL2Q99929 193 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 RELNP78509 3460 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 CSPG4Q6UVK1 2322 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 TMEM30CPA0ZSE6 113 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 J3QT63 122 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 TM4SF5O14894 197 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 GAGE2AQ6NT46 116 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 NDUFA3O95167 84 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 UBE2D1P51668 147 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 DEFB109BQ30KR1 87 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 PRNTQ86SH4 94 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 TRPT1Q86TN4 253 aaKnown RBP8.66□□□□□ -1.02
DDX11-213ENST00000539049 KLF14Q8TD94 323 aaPredicted RBP8.66□□□□□ -1.02
DDX11-213ENST00000539049 PRDM14Q9GZV8 571 aa8.66□□□□□ -1.02
DDX11-213ENST00000539049 ANKHD1Q8IWZ3 2542 aaKnown RBP8.65□□□□□ -1.02
DDX11-213ENST00000539049 TRGV11A0A075B6L2 103 aa8.65□□□□□ -1.02
DDX11-213ENST00000539049 C15orf61A6NNL5 157 aa8.65□□□□□ -1.02
DDX11-213ENST00000539049 TIMM23O14925 209 aa8.65□□□□□ -1.02
DDX11-213ENST00000539049 CCL8P80075 99 aa8.65□□□□□ -1.02
DDX11-213ENST00000539049 MRPL51Q4U2R6 128 aaKnown RBP8.65□□□□□ -1.02
DDX11-213ENST00000539049 DUX3Q96PT4 197 aa8.65□□□□□ -1.02
DDX11-213ENST00000539049 TEX49A0A1B0GTD5 131 aa8.65□□□□□ -1.03
DDX11-213ENST00000539049 TCRAP04437 139 aa8.65□□□□□ -1.03
DDX11-213ENST00000539049 TNFAIP6P98066 277 aaPredicted RBP8.65□□□□□ -1.03
DDX11-213ENST00000539049 UTF1Q5T230 341 aa8.65□□□□□ -1.03
DDX11-213ENST00000539049 WDR86Q86TI4 376 aa8.65□□□□□ -1.03
DDX11-213ENST00000539049 ARHGAP32A7KAX9 2087 aa8.65□□□□□ -1.03
DDX11-213ENST00000539049 MYCNOSP40205 109 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 S1PR3Q99500 378 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 U3KQK5 164 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 MBD3L4A6NDZ8 208 aaPredicted RBP8.64□□□□□ -1.03
DDX11-213ENST00000539049 MBD3L3A6NE82 208 aaPredicted RBP8.64□□□□□ -1.03
DDX11-213ENST00000539049 MBD3L5A6NJ08 208 aaPredicted RBP8.64□□□□□ -1.03
DDX11-213ENST00000539049 Q86TA4 180 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 ZNRF2Q8NHG8 242 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 C2CD3Q4AC94 2353 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 TLN2Q9Y4G6 2542 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 FAM208BQ5VWN6 2430 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 OOEPA6NGQ2 149 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 CD3EP07766 207 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 C4orf26Q17RF5 130 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 LINC00526Q96FQ7 95 aa8.64□□□□□ -1.03
DDX11-213ENST00000539049 CRIP2P52943 208 aaPredicted RBP8.63□□□□□ -1.03
DDX11-213ENST00000539049 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
DDX11-213ENST00000539049 NDUFA11Q86Y39 141 aa8.63□□□□□ -1.03
DDX11-213ENST00000539049 CDX4O14627 284 aaPredicted RBP8.63□□□□□ -1.03
DDX11-213ENST00000539049 IGHG3P01860 377 aa8.63□□□□□ -1.03
DDX11-213ENST00000539049 IGFBPL1Q8WX77 278 aa8.63□□□□□ -1.03
DDX11-213ENST00000539049 IFI27L2Q9H2X8 130 aa8.63□□□□□ -1.03
DDX11-213ENST00000539049 SPANXCQ9NY87 97 aa8.63□□□□□ -1.03
DDX11-213ENST00000539049 LGALS1P09382 135 aaKnown RBP8.63□□□□□ -1.03
DDX11-213ENST00000539049 GATA4P43694 442 aa8.63□□□□□ -1.03
DDX11-213ENST00000539049 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
DDX11-213ENST00000539049 ZNF714Q96N38 554 aa8.63□□□□□ -1.03
DDX11-213ENST00000539049 MRPL20Q9BYC9 149 aaKnown RBP8.63□□□□□ -1.03
DDX11-213ENST00000539049 CENPEQ02224 2701 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 C3orf36Q3SXR2 165 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 C11orf53Q8IXP5 236 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 CCL13Q99616 98 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 S4R3C0 116 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 CEP192Q8TEP8 1941 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 H3BMM0 161 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 J3QLI3 93 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 OVOL3O00110 214 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 ORM1P02763 201 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 UBE2WQ96B02 151 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 ZNF256Q9Y2P7 627 aaPredicted RBP8.62□□□□□ -1.03
DDX11-213ENST00000539049 SONP18583 2426 aaKnown RBP8.62□□□□□ -1.03
DDX11-213ENST00000539049 CSMD1Q96PZ7 3565 aa8.62□□□□□ -1.03
DDX11-213ENST00000539049 Q9H3A6 140 aa8.61□□□□□ -1.03
DDX11-213ENST00000539049 SPRR3Q9UBC9 169 aa8.61□□□□□ -1.03
DDX11-213ENST00000539049 ASH1LQ9NR48 2969 aaKnown RBP8.61□□□□□ -1.03
DDX11-213ENST00000539049 TRBV7-7A0A0K0K1E9 115 aa8.61□□□□□ -1.03
DDX11-213ENST00000539049 IGHV1-2P23083 117 aa8.61□□□□□ -1.03
DDX11-213ENST00000539049 PLNP26678 52 aa8.61□□□□□ -1.03
DDX11-213ENST00000539049 EFNA4P52798 201 aa8.61□□□□□ -1.03
DDX11-213ENST00000539049 GOLT1AQ6ZVE7 132 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms