RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 UQCC3Q6UW78 93 aa17.15■□□□□ 0.34
TMEM260-202ENST00000538838 SMIM7Q9BQ49 75 aa17.15■□□□□ 0.34
TMEM260-202ENST00000538838 C1QTNF4Q9BXJ3 329 aa17.15■□□□□ 0.34
TMEM260-202ENST00000538838 INSP01308 110 aa17.14■□□□□ 0.33
TMEM260-202ENST00000538838 SFTA3P0C7M3 94 aa17.14■□□□□ 0.33
TMEM260-202ENST00000538838 RNASE4P34096 147 aaKnown RBP17.14■□□□□ 0.33
TMEM260-202ENST00000538838 EIF4E3Q8N5X7 224 aaKnown RBP17.14■□□□□ 0.33
TMEM260-202ENST00000538838 C7orf71A4D174 169 aa17.14■□□□□ 0.33
TMEM260-202ENST00000538838 RBMY1A1P0DJD3 496 aaKnown RBP17.14■□□□□ 0.33
TMEM260-202ENST00000538838 RBMY1CP0DJD4 496 aa17.14■□□□□ 0.33
TMEM260-202ENST00000538838 RBMY1FQ15415 496 aaKnown RBP17.14■□□□□ 0.33
TMEM260-202ENST00000538838 DEFB135Q30KP9 77 aa17.14■□□□□ 0.33
TMEM260-202ENST00000538838 TMEM183AQ8IXX5 376 aa17.14■□□□□ 0.33
TMEM260-202ENST00000538838 ZC2HC1AQ96GY0 325 aa17.14■□□□□ 0.33
TMEM260-202ENST00000538838 TRAV12-3A0A0B4J271 114 aa17.13■□□□□ 0.33
TMEM260-202ENST00000538838 ZNF727A8MUV8 499 aa17.13■□□□□ 0.33
TMEM260-202ENST00000538838 SMUG1Q53HV7 270 aa17.13■□□□□ 0.33
TMEM260-202ENST00000538838 Q6ZQT7 251 aa17.13■□□□□ 0.33
TMEM260-202ENST00000538838 SBSPONQ8IVN8 264 aa17.13■□□□□ 0.33
TMEM260-202ENST00000538838 CSNK1G2-AS1Q8NCQ2 148 aa17.13■□□□□ 0.33
TMEM260-202ENST00000538838 C9JCJ5 164 aa17.12■□□□□ 0.33
TMEM260-202ENST00000538838 UBE2CO00762 179 aa17.12■□□□□ 0.33
TMEM260-202ENST00000538838 GCGP01275 180 aa17.12■□□□□ 0.33
TMEM260-202ENST00000538838 IGLV2-8P01709 118 aa17.12■□□□□ 0.33
TMEM260-202ENST00000538838 ZNF80P51504 273 aaPredicted RBP17.12■□□□□ 0.33
TMEM260-202ENST00000538838 MLST8Q9BVC4 326 aa17.12■□□□□ 0.33
TMEM260-202ENST00000538838 NBEAL2Q6ZNJ1 2754 aa17.12■□□□□ 0.33
TMEM260-202ENST00000538838 SOHLH1Q5JUK2 328 aa17.11■□□□□ 0.33
TMEM260-202ENST00000538838 COX8CQ7Z4L0 72 aa17.1■□□□□ 0.33
TMEM260-202ENST00000538838 C1orf158Q8N1D5 194 aa17.1■□□□□ 0.33
TMEM260-202ENST00000538838 MGST1P10620 155 aaKnown RBP17.09■□□□□ 0.33
TMEM260-202ENST00000538838 Q6AWC8 147 aa17.09■□□□□ 0.33
TMEM260-202ENST00000538838 RETNQ9HD89 108 aa17.09■□□□□ 0.33
TMEM260-202ENST00000538838 IGHV3OR16-12A0A075B7B8 117 aa17.08■□□□□ 0.32
TMEM260-202ENST00000538838 ZNF324O75467 553 aaPredicted RBP17.08■□□□□ 0.32
TMEM260-202ENST00000538838 FAM74A3Q4VXF1 159 aa17.08■□□□□ 0.32
TMEM260-202ENST00000538838 PRR27Q6MZM9 219 aa17.08■□□□□ 0.32
TMEM260-202ENST00000538838 Q6ZWC4 215 aa17.08■□□□□ 0.32
TMEM260-202ENST00000538838 SMIM12Q96EX1 92 aa17.08■□□□□ 0.32
TMEM260-202ENST00000538838 NIPSNAP3BQ9BS92 247 aa17.08■□□□□ 0.32
TMEM260-202ENST00000538838 FBN3Q75N90 2809 aa17.08■□□□□ 0.32
TMEM260-202ENST00000538838 CRIP1P50238 77 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 SLC7A5P1Q8MH63 180 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 OCC1Q8TAD7 63 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 RCHY1Q96PM5 261 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 TMEM208Q9BTX3 173 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 GOLT1BQ9Y3E0 138 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 TMEM218A2RU14 115 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 K7EN84 100 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 PFN1P07737 140 aaKnown RBP17.07■□□□□ 0.32
TMEM260-202ENST00000538838 B9D2Q9BPU9 175 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 C20orf144Q9BQM9 153 aa17.07■□□□□ 0.32
TMEM260-202ENST00000538838 TRAV21A0A0B4J279 112 aa17.06■□□□□ 0.32
TMEM260-202ENST00000538838 ADCYAP1P18509 176 aa17.06■□□□□ 0.32
TMEM260-202ENST00000538838 RNF183Q96D59 192 aa17.06■□□□□ 0.32
TMEM260-202ENST00000538838 SH2D1AO60880 128 aa17.05■□□□□ 0.32
TMEM260-202ENST00000538838 OR5I1Q13606 314 aa17.05■□□□□ 0.32
TMEM260-202ENST00000538838 FAM162BQ5T6X4 162 aa17.05■□□□□ 0.32
TMEM260-202ENST00000538838 ZNF705AQ6ZN79 300 aaPredicted RBP17.05■□□□□ 0.32
TMEM260-202ENST00000538838 NAT8Q9UHE5 227 aa17.05■□□□□ 0.32
TMEM260-202ENST00000538838 TMEM241Q24JQ0 296 aa17.04■□□□□ 0.32
TMEM260-202ENST00000538838 MUC21Q5SSG8 566 aa17.04■□□□□ 0.32
TMEM260-202ENST00000538838 LINC01551Q86U37 167 aa17.04■□□□□ 0.32
TMEM260-202ENST00000538838 TMEM256Q8N2U0 113 aa17.04■□□□□ 0.32
TMEM260-202ENST00000538838 LINC01587Q99440 93 aa17.04■□□□□ 0.32
TMEM260-202ENST00000538838 NAGKQ9UJ70 344 aa17.04■□□□□ 0.32
TMEM260-202ENST00000538838 LY96Q9Y6Y9 160 aa17.04■□□□□ 0.32
TMEM260-202ENST00000538838 PRKDCP78527 4128 aaKnown RBP17.04■□□□□ 0.32
TMEM260-202ENST00000538838 SPRY2O43597 315 aa17.03■□□□□ 0.32
TMEM260-202ENST00000538838 TM2D3Q9BRN9 247 aa17.03■□□□□ 0.32
TMEM260-202ENST00000538838 OVOL2Q9BRP0 275 aa17.03■□□□□ 0.32
TMEM260-202ENST00000538838 C11orf21Q9P2W6 132 aa17.03■□□□□ 0.32
TMEM260-202ENST00000538838 FABP5P3A8MUU1 101 aa17.03■□□□□ 0.32
TMEM260-202ENST00000538838 H7BYZ3 331 aa17.03■□□□□ 0.32
TMEM260-202ENST00000538838 PRM2P04554 102 aa17.03■□□□□ 0.32
TMEM260-202ENST00000538838 TENM3Q9P273 2699 aa17.02■□□□□ 0.32
TMEM260-202ENST00000538838 F8W036 122 aa17.02■□□□□ 0.31
TMEM260-202ENST00000538838 RPL23P62829 140 aaKnown RBP17.02■□□□□ 0.31
TMEM260-202ENST00000538838 NDUFA5Q16718 116 aa17.02■□□□□ 0.31
TMEM260-202ENST00000538838 SPATA25Q9BR10 227 aa17.02■□□□□ 0.31
TMEM260-202ENST00000538838 TP53TG1Q9Y2A0 90 aa17.02■□□□□ 0.31
TMEM260-202ENST00000538838 X6R8D5 127 aa17.02■□□□□ 0.31
TMEM260-202ENST00000538838 HTN1P15515 57 aa17.01■□□□□ 0.31
TMEM260-202ENST00000538838 ADIRFQ15847 76 aa17.01■□□□□ 0.31
TMEM260-202ENST00000538838 OR11H2Q8NH07 326 aa17.01■□□□□ 0.31
TMEM260-202ENST00000538838 PYGO2Q9BRQ0 406 aa17.01■□□□□ 0.31
TMEM260-202ENST00000538838 COL7A1Q02388 2944 aa17.01■□□□□ 0.31
TMEM260-202ENST00000538838 ZNF705GA8MUZ8 300 aaPredicted RBP17■□□□□ 0.31
TMEM260-202ENST00000538838 SDF2L1Q9HCN8 221 aa17■□□□□ 0.31
TMEM260-202ENST00000538838 IGHV1OR15-1A0A075B7D0 117 aa16.99■□□□□ 0.31
TMEM260-202ENST00000538838 M0R036 132 aa16.99■□□□□ 0.31
TMEM260-202ENST00000538838 ANXA2RQ3ZCQ2 193 aa16.99■□□□□ 0.31
TMEM260-202ENST00000538838 BIN3Q9NQY0 253 aa16.99■□□□□ 0.31
TMEM260-202ENST00000538838 C19orf71A6NCJ1 209 aa16.99■□□□□ 0.31
TMEM260-202ENST00000538838 FAM159AQ6UWV7 190 aa16.99■□□□□ 0.31
TMEM260-202ENST00000538838 SEC11CQ9BY50 192 aa16.99■□□□□ 0.31
TMEM260-202ENST00000538838 RNASE7Q9H1E1 156 aaKnown RBP16.99■□□□□ 0.31
TMEM260-202ENST00000538838 TP53TG3Q9ULZ0 132 aa16.99■□□□□ 0.31
TMEM260-202ENST00000538838 ORM1P02763 201 aa16.98■□□□□ 0.31
TMEM260-202ENST00000538838 IGKV3D-20A0A0C4DH25 116 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms