RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 ZNF491Q8N8L2 437 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 MRPL35Q9NZE8 188 aaKnown RBP7.03□□□□□ -1.28
SNHG1-209ENST00000538654 VPREB3Q9UKI3 123 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 INSL3P51460 131 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 CFAP126Q5VTH2 177 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 MAPKAPK5-AS1Q8N8E1 139 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 C20orf78Q9BR46 151 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 PRRG2O14669 202 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 ZNF883P0CG24 379 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 LAGE3Q14657 143 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 CDSNQ15517 529 aa7.03□□□□□ -1.28
SNHG1-209ENST00000538654 ZNF474Q6S9Z5 364 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-209ENST00000538654 MYMXA0A1B0GTQ4 84 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 ERG28Q9UKR5 140 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 INTS1Q8N201 2190 aaKnown RBP7.02□□□□□ -1.29
SNHG1-209ENST00000538654 ARFGEF3Q5TH69 2177 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 IGHV3-72A0A0B4J1Y9 119 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 TRAV12-1A0A0B4J245 112 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 FABP5P3A8MUU1 101 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 H7C1H1 209 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 ORM1P02763 201 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 Q6ZUT4 128 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 MRAPQ8TCY5 172 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 PPDPFLQ8WWR9 84 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 RNF5Q99942 180 aa7.02□□□□□ -1.29
SNHG1-209ENST00000538654 WDFY3Q8IZQ1 3526 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 AHCTF1Q8WYP5 2266 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 IGHV1-8P0DP01 117 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 RPL7P18124 248 aaKnown RBP7.01□□□□□ -1.29
SNHG1-209ENST00000538654 DLX6P56179 175 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 PPDPFQ9H3Y8 114 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 PLXNB1O43157 2135 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 FRYQ5TBA9 3013 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 IGLV2-18A0A075B6J9 118 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 IGKV2-40A0A087WW87 121 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-209ENST00000538654 A0A1W2PNU3 283 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-209ENST00000538654 K7EIM0 57 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 K7EMI3 77 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 OXTP01178 125 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 IGKV2D-40P01614 121 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-209ENST00000538654 XGP55808 180 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 TMEM155Q4W5P6 130 aa7.01□□□□□ -1.29
SNHG1-209ENST00000538654 MORN3Q6PF18 240 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-209ENST00000538654 TMEM262E9PQX1 116 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 F8VRH5 84 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 CNTFRP26992 372 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 CCL8P80075 99 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 NUP37Q8NFH4 326 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 KIR2DL5BQ8NHK3 375 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 MSRB1Q9NZV6 116 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 AGRNO00468 2067 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 TRAV17A0A0B4J275 112 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 DTX2Q86UW9 622 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 OR11H6Q8NGC7 330 aa7□□□□□ -1.29
SNHG1-209ENST00000538654 IGHV1-3A0A0C4DH29 117 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 SMIM9A6NGZ8 99 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 TMEM178BH3BS89 294 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 LAMTOR5O43504 91 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 NDUFA3O95167 84 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 ZNF80P51504 273 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-209ENST00000538654 TEN1Q86WV5 123 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 TRBV20-1A0A075B6N2 111 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 MT-ATP8P03928 68 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 LOXP28300 417 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-209ENST00000538654 ATP1A1-AS1Q5TC04 95 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 PSMG3-AS1Q96PY0 264 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 ANAPC13Q9BS18 74 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 FBXL15Q9H469 300 aa6.99□□□□□ -1.29
SNHG1-209ENST00000538654 PPIFP30405 207 aaKnown RBP6.98□□□□□ -1.29
SNHG1-209ENST00000538654 PSMB2P49721 201 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 SMCPP49901 116 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-209ENST00000538654 NFE4Q86UQ8 179 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 AJUBAQ96IF1 538 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 KAAG1Q9UBP8 84 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 TNFRSF13BO14836 293 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-209ENST00000538654 GAS8-AS1O95177 125 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 SLC25A16P16260 332 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 GAGE5Q13069 117 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 GAGE6Q13070 117 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 ZFAND6Q6FIF0 208 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 RALYQ9UKM9 306 aaKnown RBP6.98□□□□□ -1.29
SNHG1-209ENST00000538654 RAXQ9Y2V3 346 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 FRYLO94915 3013 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 EYSQ5T1H1 3165 aa6.98□□□□□ -1.29
SNHG1-209ENST00000538654 UBE2D1P51668 147 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 UBE2D3P61077 147 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 UBE2D2P62837 147 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 FOXC1Q12948 553 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 TMEM78Q5T7P6 136 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 Q8TAT8 98 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 RNF183Q96D59 192 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 CADP27708 2225 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 LINC01549A6NIU2 74 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 BUB1B-PAK6H3BSN5 160 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 IGLV1-47P01700 117 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 LGALS1P09382 135 aaKnown RBP6.97□□□□□ -1.29
SNHG1-209ENST00000538654 ZNF688P0C7X2 276 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 PRB4P10163 310 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-209ENST00000538654 GATA1P15976 413 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms